-
1
-
-
0344897060
-
Propionicimonas paludicola gen. nov., sp. nov., a novel facultatively anaerobic, Gram-positive, propionate-producing bacterium isolated from plant residue in irrigated rice-field soil
-
Akasaka, H., Ueki, A, Hanada, S., Kamagata, Y. & Ueki, K. (2003 . Propionicimonas paludicola gen. nov., sp. nov., a novel facultatively anaerobic, Gram-positive, propionate-producing bacterium isolated from plant residue in irrigated rice-field soil. Int J Syst Evol Microbiol 53, 1991-1998.
-
(2003)
Int J Syst Evol Microbiol
, vol.53
, pp. 1991-1998
-
-
Akasaka, H.1
Ueki, A.2
Hanada, S.3
Kamagata, Y.4
Ueki, K.5
-
2
-
-
0022478458
-
Denitrification by Chromobacterium violaceum
-
Bazylinski, D. A., Palome, E. Blakemore, N. A. & Blakemore, R. P. (1986). Denitrification by Chromobacterium violaceum. Appl Environ Microbiol 52, 696-699.
-
(1986)
Appl Environ Microbiol
, vol.52
, pp. 696-699
-
-
Bazylinski, D.A.1
Palome, E.2
Blakemore, N.A.3
Blakemore, R.P.4
-
3
-
-
0036203349
-
Propionate formation by Opitutus terrae in pure culture and in mixed culture with a hydrogenotrophic methanogen and implications for carbon fluxes in anoxic rice paddy soil
-
Chin, K. J. & Janssen, P. H. (2002). Propionate formation by Opitutus terrae in pure culture and in mixed culture with a hydrogenotrophic methanogen and implications for carbon fluxes in anoxic rice paddy soil. Appl Environ Microbiol 68, 2089-2092.
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 2089-2092
-
-
Chin, K.J.1
Janssen, P.H.2
-
4
-
-
0141614069
-
-
Cleenwerck, I., De Wachter, M., Hoste, B., Janssens, D. & Swings, J. (2003). Aquaspirillum dispar Hylemon et al. 1973 and Microvirgula aerodenitrificans Patureau et al. 1998 are subjective synonyms. Int J Syst Evol Microbiol 53, 1457-1459.
-
Cleenwerck, I., De Wachter, M., Hoste, B., Janssens, D. & Swings, J. (2003). Aquaspirillum dispar Hylemon et al. 1973 and Microvirgula aerodenitrificans Patureau et al. 1998 are subjective synonyms. Int J Syst Evol Microbiol 53, 1457-1459.
-
-
-
-
5
-
-
0034106192
-
Description of Pandoraea gen. nov. with Pandoraea apista sp. nov., Pandoraea pulmonicola sp. nov., Pandoraea pnomenusa sp. nov., Pandoraea sputorum sp. nov. and Pandoraea norimbergensis comb. nov
-
Coenye, T., Falsen, E., Hoste, B., Ohlén, M, Goris, J. Gowan, J. R. W., Gillis, M. & Vandamme, P. (2000). Description of Pandoraea gen. nov. with Pandoraea apista sp. nov., Pandoraea pulmonicola sp. nov., Pandoraea pnomenusa sp. nov., Pandoraea sputorum sp. nov. and Pandoraea norimbergensis comb. nov. Int J Syst Evol Microbiol 50, 887-899.
-
(2000)
Int J Syst Evol Microbiol
, vol.50
, pp. 887-899
-
-
Coenye, T.1
Falsen, E.2
Hoste, B.3
Ohlén, M.4
Goris, J.5
Gowan, J.R.W.6
Gillis, M.7
Vandamme, P.8
-
6
-
-
0034802283
-
Methanoculleus chikugoensis sp. nov., a novel methanogenic archaeon isolated from paddy field soil in Japan, and DNA-DNA hybridization among Methanoculleus species
-
Dianou, D., Miyaki, T., Asakawa, S., Morii, H., Nagaoka, K, Oyaizu, H. & Matsumoto, S. (2001). Methanoculleus chikugoensis sp. nov., a novel methanogenic archaeon isolated from paddy field soil in Japan, and DNA-DNA hybridization among Methanoculleus species. Int J Syst Evol Microbiol 51, 1663-1669.
-
(2001)
Int J Syst Evol Microbiol
, vol.51
, pp. 1663-1669
-
-
Dianou, D.1
Miyaki, T.2
Asakawa, S.3
Morii, H.4
Nagaoka, K.5
Oyaizu, H.6
Matsumoto, S.7
-
7
-
-
11144303552
-
Comparing field and microcosm experiments: A case study on methano- and methylotrophic bacteria in paddy soil
-
Eller, G., Kruger, M. & Frenzel, P. (2005). Comparing field and microcosm experiments: A case study on methano- and methylotrophic bacteria in paddy soil. FEMS Microbiol Ecol 51, 279-291.
-
(2005)
FEMS Microbiol Ecol
, vol.51
, pp. 279-291
-
-
Eller, G.1
Kruger, M.2
Frenzel, P.3
-
8
-
-
34250774060
-
-
Felsenstein, J, 2002, PHYLIP phylogeny inference package, version 3.6a. Department of Genome Sciences, University of Washington, Seattle, USA
-
Felsenstein, J. (2002). PHYLIP (phylogeny inference package), version 3.6a. Department of Genome Sciences, University of Washington, Seattle, USA.
-
-
-
-
9
-
-
77956986901
-
Preparation of buffers for use in enzyme studies
-
Gomori, G. (1955). Preparation of buffers for use in enzyme studies. Methods Enzymol 1, 138-146.
-
(1955)
Methods Enzymol
, vol.1
, pp. 138-146
-
-
Gomori, G.1
-
10
-
-
0031031697
-
Systematic study of the genus Vogesella gen. nov. and its type species, Vogesella indigofera comb. nov
-
Grimes, D. J., Woese, C. R., MacDonell, M. T. & Colwell, R. R. (1997) Systematic study of the genus Vogesella gen. nov. and its type species, Vogesella indigofera comb. nov. Int J Syst Bacteriol 47, 19-27.
-
(1997)
Int J Syst Bacteriol
, vol.47
, pp. 19-27
-
-
Grimes, D.J.1
Woese, C.R.2
MacDonell, M.T.3
Colwell, R.R.4
-
11
-
-
26244454786
-
Reclassification of Bacillus haloalkaliphilus Fritze 1996 as Alkalibacillus haloalkaliphilus gen. nov., comb. nov. and the description of Alkalibacillus salilacus sp. nov., a novel halophilic bacterium isolated from a salt lake in China
-
Jeon, C. O., Lim, J.-M., Lee, J.-M., Xu, L.-H., Jiang, C.-L. & Kim, C.-J. (2005). Reclassification of Bacillus haloalkaliphilus Fritze 1996 as Alkalibacillus haloalkaliphilus gen. nov., comb. nov. and the description of Alkalibacillus salilacus sp. nov., a novel halophilic bacterium isolated from a salt lake in China. Int J Syst Evol Microbiol 55, 1891-1896.
-
(2005)
Int J Syst Evol Microbiol
, vol.55
, pp. 1891-1896
-
-
Jeon, C.O.1
Lim, J.-M.2
Lee, J.-M.3
Xu, L.-H.4
Jiang, C.-L.5
Kim, C.-J.6
-
12
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
-
(1980)
J Mol Evol
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
13
-
-
77956800518
-
Lipid and cell wall analysis in bacterial systematics
-
Komagata, K. & Suzuki, K (1987). Lipid and cell wall analysis in bacterial systematics. Methods Microbiol 19, 161-207.
-
(1987)
Methods Microbiol
, vol.19
, pp. 161-207
-
-
Komagata, K.1
Suzuki, K.2
-
14
-
-
34250709119
-
-
VP. In Bergey's Manual of Systematic Bacteriology, 2, part C, pp. 858-859. Edited by D. J. Brenner, N. R. Kreig, J. T. Staley & G. M. Garrity. New York: Springer.
-
VP. In Bergey's Manual of Systematic Bacteriology, vol. 2, part C, pp. 858-859. Edited by D. J. Brenner, N. R. Kreig, J. T. Staley & G. M. Garrity. New York: Springer.
-
-
-
-
15
-
-
0001857117
-
16S/23S rRNA sequencing
-
Edited by E. Stackebrandt & M. Goodfellow. Chichester, UK: Wiley
-
Lane, D. J. (1991). 16S/23S rRNA sequencing. In Nucleic Acid Techniques in Bacterial Systematics, pp. 115-175. Edited by E. Stackebrandt & M. Goodfellow. Chichester, UK: Wiley.
-
(1991)
Nucleic Acid Techniques in Bacterial Systematics
, pp. 115-175
-
-
Lane, D.J.1
-
16
-
-
77956816836
-
Classical and rapid identification methods for medically important bacteria
-
Lanyi, B. (1987). Classical and rapid identification methods for medically important bacteria. Methods Microbiol 19, 1-67.
-
(1987)
Methods Microbiol
, vol.19
, pp. 1-67
-
-
Lanyi, B.1
-
17
-
-
33646201914
-
Aquitalea magnusonii gen. nov., sp. nov., a novel Gram-negative bacterium isolated from a humic lake
-
Lau, H.-T., Faryna, J. & Triplett E. W. (2006). Aquitalea magnusonii gen. nov., sp. nov., a novel Gram-negative bacterium isolated from a humic lake. Int J Syst Evol Microbiol 56, 867-871.
-
(2006)
Int J Syst Evol Microbiol
, vol.56
, pp. 867-871
-
-
Lau, H.-T.1
Faryna, J.2
Triplett, E.W.3
-
18
-
-
0000978501
-
Determination of carbohydrate metabolism of marine bacteria
-
Leifson, E. (1963). Determination of carbohydrate metabolism of marine bacteria. J Bacteriol 85, 1183-1184.
-
(1963)
J Bacteriol
, vol.85
, pp. 1183-1184
-
-
Leifson, E.1
-
19
-
-
0024466537
-
Numerical taxonomy of violet-pigmented, gram-negative bacteria and description of Iodobacter fluviatile gen. nov., comb. nov
-
Logan, N. A. (1989). Numerical taxonomy of violet-pigmented, gram-negative bacteria and description of Iodobacter fluviatile gen. nov., comb. nov. Int J Syst Bacteriol 39, 450-456.
-
(1989)
Int J Syst Bacteriol
, vol.39
, pp. 450-456
-
-
Logan, N.A.1
-
20
-
-
0031852636
-
Microvirgula aerodenitrificans gen. nov., sp. nov., a new Gram-negative bacterium exhibiting corespiration of oxygen and nitrogen oxides up to oxygen-saturated conditions
-
Patureau, D., Godon, J.-J, Dabert, P, Bouchez, T., Bernet N., Delgenes, J. P. & Moletta, R. (1998). Microvirgula aerodenitrificans gen. nov., sp. nov., a new Gram-negative bacterium exhibiting corespiration of oxygen and nitrogen oxides up to oxygen-saturated conditions. Int J Syst Bacteriol 48, 775-782.
-
(1998)
Int J Syst Bacteriol
, vol.48
, pp. 775-782
-
-
Patureau, D.1
Godon, J.-J.2
Dabert, P.3
Bouchez, T.4
Bernet, N.5
Delgenes, J.P.6
Moletta, R.7
-
21
-
-
0000612080
-
Phenotypic characterization
-
Edited by P. Gerhardt. Washington, DC: American Society for Microbiology
-
Smibert R. M. & Krieg, N. R. (1994). Phenotypic characterization. In Methods for General and Molecular Bacteriology, pp. 607-654. Edited by P. Gerhardt. Washington, DC: American Society for Microbiology.
-
(1994)
Methods for General and Molecular Bacteriology
, pp. 607-654
-
-
Smibert, R.M.1
Krieg, N.R.2
-
22
-
-
0021715576
-
Determination of DNA base composition by reversed-phase high-performance liquid chromatography
-
Tamaoka, J. & Komagata, K. (1984). Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol Lett 25, 125-128.
-
(1984)
FEMS Microbiol Lett
, vol.25
, pp. 125-128
-
-
Tamaoka, J.1
Komagata, K.2
-
23
-
-
0025875184
-
Fermentation of S-citramalate, citrate, mesaconate, and pyruvate by a Gram-negative strictly anaerobic non-spore-former, Formivibrio citricus gen. nov., sp. nov
-
Tanaka, K., Nakamura, K. & Mikami, E. (1991). Fermentation of S-citramalate, citrate, mesaconate, and pyruvate by a Gram-negative strictly anaerobic non-spore-former, Formivibrio citricus gen. nov., sp. nov. Arch Microbiol 155, 491-495.
-
(1991)
Arch Microbiol
, vol.155
, pp. 491-495
-
-
Tanaka, K.1
Nakamura, K.2
Mikami, E.3
-
24
-
-
0027968068
-
-
Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
-
Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
-
-
-
-
25
-
-
31144439293
-
Paludibacter propionicigenes gen. nov., sp. nov., a novel strictly anaerobic, Gram-negative, propionate-producing bacterium isolated from plant residue in irrigated rice-field soil in Japan
-
Ueki, A., Akasaka, H., Suzuki, D. & Ueki, K. (2006). Paludibacter propionicigenes gen. nov., sp. nov., a novel strictly anaerobic, Gram-negative, propionate-producing bacterium isolated from plant residue in irrigated rice-field soil in Japan. Int J Syst Evol Microbiol 56, 39-44.
-
(2006)
Int J Syst Evol Microbiol
, vol.56
, pp. 39-44
-
-
Ueki, A.1
Akasaka, H.2
Suzuki, D.3
Ueki, K.4
-
26
-
-
27844555477
-
Silvimonas terrae gen. nov., sp. nov., a novel chitin-degrading facultative anaerobe belonging to the 'Betaproteobacteria'. Int
-
Yang, H.-C., Im, W.-T., An., D.-S., Park W.-S., Kim, I. S. & Lee, S.-T. (2005). Silvimonas terrae gen. nov., sp. nov., a novel chitin-degrading facultative anaerobe belonging to the 'Betaproteobacteria'. Int J Syst Evol Microbiol 55, 2329-2332.
-
(2005)
J Syst Evol Microbiol
, vol.55
, pp. 2329-2332
-
-
Yang, H.-C.1
Im, W.-T.2
An, D.-S.3
Park, W.-S.4
Kim, I.S.5
Lee, S.-T.6
-
27
-
-
0035208662
-
Laribacter hongkongensis gen. nov., sp. nov., a novel gram-negative bacterium isolated from a cirrhotic patient with bacteremia and empyena
-
Yuen, K.-Y., Woo, P. C. Y., Teng, J. L. L., Leung, K.-W., Wong, M. K. M. & Lau, S. K. P. (2001). Laribacter hongkongensis gen. nov., sp. nov., a novel gram-negative bacterium isolated from a cirrhotic patient with bacteremia and empyena. J Clin Microbiol 39, 4227-4232.
-
(2001)
J Clin Microbiol
, vol.39
, pp. 4227-4232
-
-
Yuen, K.-Y.1
Woo, P.C.Y.2
Teng, J.L.L.3
Leung, K.-W.4
Wong, M.K.M.5
Lau, S.K.P.6
|