Development of simple sequence repeat markers in Cymbopogon species

Planta Medica

Volumn 73, Issue 3, 2007, Pages 262-266

  Kumar, Jitendra ^a,b   Verma, Vijeshwar ^a   Shahi, Ashok Kumar ^a   Qazi, Gulam Nab ^a   Balyan, Harindra Singh ^b  

^a CSIR INDIAN INSTITUTE OF INTEGRATIVE MEDICINE   (India)

^b CH CHARAN SINGH UNIVERSITY   (India)

Author keywords

Cymbopogon species; Genomic library; Poaceae; Polymorphism; SSR markers

Indexed keywords

ESSENTIAL OIL; PLANT DNA;

ARTICLE; CONTROLLED STUDY; CYMBOPOGON; CYMBOPOGON FLEXOUSUS; CYMBOPOGON JWARANCUSA; CYMBOPOGON PENDULUS; GENE FREQUENCY; GENE SEQUENCE; GENETIC POLYMORPHISM; MOLECULAR CLONING; NONHUMAN; PHENOTYPE; PLANT GENETICS; SIMPLE SEQUENCE REPEAT;

BASE SEQUENCE; CYMBOPOGON; DNA, PLANT; GENOME, PLANT; GENOMIC LIBRARY; HUMANS; MICROSATELLITE REPEATS; MOLECULAR SEQUENCE DATA; PHYTOTHERAPY; POLYMERASE CHAIN REACTION;

CYMBOPOGON; CYMBOPOGON FLEXUOSUS; CYMBOPOGON JWARANCUSA; CYMBOPOGON PENDULUS; POACEAE;

EID: 34250378760     PISSN: 00320943     EISSN: None     Source Type: Journal    
DOI: 10.1055/s-2007-967121     Document Type: Article

References (18)

1. Khanuja SPS, Shasany AK, Pawar A, Lal RK, Darokar MP, Naqvi AA et al. Essential oil constituents and RAPD markers to establish species relationships in Cymbopogon Spreng. (Poaceae). Biochem Syst Ecol 2005; 33: 171-86.
2. Joshi K, Chavan P, Warude D, Patwardhan B. Molecular markers in herbal drug technology. Curr Sci 2004; 87: 159-65.
3. Rao BL. Scope for development of new cultivars of Cymbopogons as a source of terpene chemicals. In: Handa, SS, Kaul MK, editors. Supplement to cultivation and utilization of aromatic plants. New Delhi NISC: Dr. K.S. Krishnan Marg; 1997: 71-83.
4. Yang M, Zhang D, Liu J, Zheng J. A molecular marker that is specific to medicinal rhubarb based on chloroplast trnL/trnF sequences. Planta Med 2001; 67: 784-6.
5. Li YF, Li YX, Lin J, Xu Y, Yan F, Tang L et al. Identification of bulb from Fritillaria cirrhosa by PCR with specific primers. Planta Med 2003; 69: 186-8.
6. Crockett SL, Douglas AW, Scheffler BE, Khan IA. Genetic profiling of Hypericum (St. John's Wort) species by nuclear ribosomal ITS sequence analysis. Planta Med 2004; 70: 929-35.
7. Gupta PK, Balyan HS, Sharma PC, Ramesh B. Microsatellite in plants: a new class of molecular markers. Curr Sci 1996; 70: 45-54.
8. Cordeiro GM, Taylor GO, Henry RJ. Characterization of microsatellite markers from sugarcane (Saccharum sp.), a highly polyploid species. Plant Sci 2000; 155: 161-8.
9. Schlotterer C, Tautz D. Slippage synthesis of simple sequence DNA. Nucleic Acids Res 1992; 20: 211-5.
10. Prabhu KV, Somers DJ, Rakow G, Gugel RK. Molecular markers linked to white rust resistance in mustard Brassica juncea. Theor Appl Genet 1998; 97: 865-70.
11. Zane L, Bargelloni L, Patarnello T. Strategies for microsatellite isolation: a review. Mol Ecol 2002; 11: 1-6.
12. Tegelstrom H. Detection of mitochondrial DNA fragments. In: Hoelzel AR, editor. Molecular genetic analysis of populations: a practical approach. Oxford, New York: IRL Press; 1992: 89-114.
13. Weir BS. Genetic-data analysis methods for discrete genetic data. Sunderland: Sinauer Association Inc; 1990.
14. Ashkenazi V, Chani E, Lavi U, Levy D, Hillel J, Veilleux RE. Development of microsatellite markers in potato and their use in phylogenetics and fingerprinting analyses. Genome 2001; 44: 50-62.
15. Brown SM, Hopkins MS, Mitchell SE, Senior ML, Wang TY, Duncan RR et al. Multiple method for the identification of polymorphic simple sequence repeats (SSRs) in sorghum [Sorghum bicolor (L.) Moench]. Theor Appl Genet 1996; 93: 190-8.
16. Cordeiro GM, Cazu R, Me Intigre CL, Manners JM, Henry RJ. Microsatellite markers for sugarcane (Saccharum spp.) ESTs cross transferable to erianthus an sorghum. Plant Sci 2001; 160: 1115-23.
17. Stajner N, Jakse J, Kozjak P, Javornik B. The isolation and characterization of microsatellites hop (Humulus lupulus L.). Plant Sci 2004; 168: 213-21.
18. Powell W, Machrary GC, Rovan J. Polymorphism revealed by simple sequence repeats. Trends Plant Sci 1996; 1: 215-22.