Interaction of alamethicin pores in DMPC bilayers

Biophysical Journal

Volumn 92, Issue 11, 2007, Pages 3978-3987

  Constantin, D ^a,b   Brotons, G ^a,c   Jarre, A ^a   Li, C ^a   Salditt, T ^a  

^a Institut für Röntgenphysik   (Germany)

^b UNIVERSITÉ PARIS SUD   (France)

^c UNIVERSITÉ DU MAINE   (France)

Author keywords

[No Author keywords available]

Indexed keywords

ALAMETHICIN; DIMYRISTOYLPHOSPHATIDYLCHOLINE;

ANALYTIC METHOD; ARTICLE; BILAYER MEMBRANE; GEOMETRY; QUALITATIVE ANALYSIS; RADIATION SCATTERING; THEORETICAL MODEL;

EID: 34250373778     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1529/biophysj.106.101204     Document Type: Article

References (66)

1. Korlach, J., P. Schwille, W. Webb, and G. Feigenson. 1999. Characterization of lipid bilayer phases by confocal microscopy and fluorescence correlation spectroscopy. Proc. Natl. Acad. Sci. USA. 96:8461-8466.
2. Oesterhelt, F., D. Oesterhelt, M. Pfeiffer, A. Engel, H. Gaub, and D. Muller. 2000. Unfolding pathways of individual bacteriorhodopsins. Science. 288:143-146.
3. Duclohier, H., and H. Wróblewski. 2001. Voltage-dependent pore formation and antimicrobial activity by alamethicin and analogues. J. Membr. Biol. 184:1-12.
4. Olah, G. A., and H. W. Huang. 1988. Circular dichroism of oriented α helices. I. Proof of the exciton theory. J. Chem. Phys. 89:2531-2538.
5. Chen, F.-Y., M.-T. Lee, and H. W. Huang. 2002. Sigmoidal concentration dependence of antimicrobial peptide activities: a case study on alamethicin. Biophys. J. 82:908-914.
6. Bechinger, B. 1999. The structure, dynamics and orientation of antimicrobial peptides in membranes by multidimensional solid-state NMR spectroscopy. Biochim. Biophys. Acta. 1462:157-183.
7. Bechinger, B. 1997. Structure and functions of channel-forming peptides: magainins, cecropins, melittin and alamethicin. J. Membr. Biol. 156:197-211.
8. Lau, A. L. Y., and S. I. Chan. 1976. Voltage-induced formation of alamethicin pores in lecithin bilayer vesicles. Biochemistry. 15:2551-2555.
9. Shai, Y. 1999. Mechanism of the binding, insertion and destabilization of phospholipid bilayer membranes by α-helical antimicrobial and cell non-selective membrane-lytic peptides. Biochim. Biophys. Acta. 1462:55-70.
10. Huang, H. 2000. Action of antimicrobial peptides: two-state model. Biochemistry. 39:8347-8352.
11. He, K., S. J. Ludtke, H. W. Huang, and D. L. Worcester. 1995. Antimicrobial peptide pores in membranes detected by neutron in-plane scattering. Biochemistry. 34:15614-15618.
12. He, K., S. J. Ludtke, D. L. Worcester, and H. W. Huang. 1996. Neutron scattering in the plane of the membranes: structure of alamethicin pores. Biophys. J. 70:2659-2666.
13. Yang, L., T. Weiss, T. Harroun, W. Heller, and H. Huang. 1999. Supramolecular structures of peptide assemblies in membranes by neutron off-plane scattering: method of analysis. Biophys. J. 77:2648-2656.
14. Lagüe, P., M. J. Zuckermann, and B. Roux. 2000. Lipid-mediated interactions between intrinsic membrane proteins: a theoretical study based on integral equations. Biophys. J. 79:2867-2879.
15. Lagüe, P., M. J. Zuckermann, and B. Roux. 2001. Lipid-mediated interactions between intrinsic membrane proteins: dependence on protein size and lipid composition. Biophys. J. 81:276-284.
16. Ludtke, S. J., K. He, and H. W. Huang. 1995. Membrane thinning caused by magainin 2. Biochemistry. 34:16764-16769.
17. Yang, L., T. M. Weiss, R. I. Lehrer, and H. W. Huang. 2000. Crystallization of antimicrobial pores in membranes: magainin and protegrin. Biophys. J. 79:2002-2009.
18. Li, C., D. Constantin, and T. Salditt. 2004. Biomimetic membranes of lipid-peptide model systems prepared on solid support. J. Phys. Cond. Matt. 16:S2439-S2453.
19. Tolan, M. 1999. X-Ray Scattering from Soft-Matter Thin Films. Springer Verlag, Berlin.
20. Als-Nielsen, J., and D. McMorrow. 2001. Elements of Modern X-Ray Physics. John Wiley & Sons.
21. Chaikin, P. M., and T. C. Lubensky. 1995. Principles of Condensed Matter Physics. Cambridge University Press, Cambridge.
22. Nagle, J., and S. Tristram-Nagle. 2000. Structure of lipid bilayers. Biochim. Biophys. Acta. 1469:159-195.
23. Rawicz, W., K. C. Olbrich, T. McIntosh, D. Needham, and E. Evans. 2000. Effect of chain length and unsaturation on elasticity of lipid bilayers. Biophys. J. 79:328-339.
24. Wu, Y., K. He, S. J. Ludtke, and H. W. Huang. 1995. X-ray diffraction study of lipid bilayer membranes interacting with amphiphilic helical peptides: diphytanoyl phosphatidylcholine with alamethicin at low concentration. Biophys. J. 68:2361-2369.
25. Cantor, R. S. 2002. Size distribution of barrel-stave aggregates of membrane peptides: influence of the bilayer lateral pressure profile. Biophys. J. 82:2520-2525.
26. Tieleman, D. P., B. Hess, and M. S. P. Sansom. 2002. Analysis and evaluation of channel models: simulations of alamethicin. Biophys. J. 83:2393-2407.
27. Lösche, M. 2002. Surface-sensitive x-ray and neutron scattering characterization of planar lipid model membranes and lipid/peptide interactions. Curr. Topics Membr. 52:117-161.
28. Salditt, T., C. Li, A. Spaar, and U. Mennicke. 2002. X-ray reflectivity of solid-supported multilamellar membranes. Eur. Phys. J. E. 7:105-116.
29. Salditt, T., and G. Brotons. 2004. Biomolecular and amphiphilic films probed by surface sensitive x-ray and neutron scattering. Anal. Bioanal. Chem. 379:960-973.
30. Salditt, T. 2005. Thermal fluctuations and stability of solid-supported lipid membranes. J. Phys. Cond. Matt. 17:R287-R314.
31. Epand, R., and H. Vogel. 1999. Diversity of antimicrobial peptides and their mechanisms of action. Biochim. Biophys. Acta. 1462:11-28.
32. Tieleman, D. P., H. J. C. Berendsen, and M. S. P. Sansom. 1999. An alamethicin channel in a lipid bilayer: molecular dynamics simulations. Biophys. J. 76:1757-1769.
33. Rosenfeld, Y. 1990. Free-energy model for the inhomogeneous hardsphere fluid in D dimensions: structure factors for the hard-disk (D = 2) mixtures in simple explicit form. Phys. Rev. A. 42:5978-5988.
34. Lewis, B. A., and D. M. Engelman. 1983. Bacteriorhodopsin remains dispersed in fluid phospholipid bilayers over a wide range of bilayer thicknesses. J. Mol. Biol. 166:203-210.
35. Chen, Y. S., and W. L. Hubbell. 1973. Temperature- and light-dependent structural changes in rhodopsin-lipid membranes. Exp. Eye Res. 17:517-532.
36. James, R., and D. Branton. 1973. Lipid- and temperature-dependent structural changes in Acholeplasma laidlawii cell membranes. Biochim. Biophys. Acta. 323:378-390.
37. Abney, J. R., J. Braun, and J. C. Owicki. 1987. Lateral interactions among membrane proteins: implications for the organization of gap junctions. Biophys. J. 52:441-454.
38. Pearson, L. T., B. A. Lewis, D. M. Engelman, and S. I. Chan. 1983. Pair distribution functions of bacteriorhodopsin and rhodopsin in model bilayers. Biophys. J. 43:167-174.
39. Pearson, L. T., J. Edelman, and S. I. Chan. 1984. Statistical mechanics of lipid membranes, protein correlation functions and lipid ordering. Biophys. J. 45:863-871.
40. Braun, J., J. R. Abney, and J. C. Owicki. 1987. Lateral interactions among membrane proteins: valid estimates based on freeze-fracture electron microscopy. Biophys. J. 52:427-439.
41. Marčelja, S. 1976. Lipid-mediated protein interaction in membranes. Biochim. Biophys. Acta. 455:1-7.
42. Owicki, J. C., M. W. Springgate, and H. M. McConnell. 1978. Theoretical study of protein-lipid interactions in bilayer membranes. Proc. Natl. Acad. Sci. USA. 75:1616-1619.
43. Owicki, J. C., and H. M. McConnell. 1979. Theory of protein-lipid and protein-protein interactions in bilayer membranes. Proc. Natl. Acad. Sci. USA. 76:4750-4754.
44. Kralchevsky, P. A. 1997. Lateral forces acting between particles in liquid films or lipid membranes. Adv. Biophys. 34:25-39.
45. Huang, H. W. 1986. Deformation free energy of bilayer membrane and its effect on gramicidin channel lifetime. Biophys. J. 50:1061-1070.
46. Helfrich, P., and E. Jakobsson. 1990. Calculation of deformation energies and conformations in lipid membranes containing gramicidin channels. Biophys. J. 57:1075-1084.
47. Goulian, M., R. Bruinsma, and P. Pincus. 1993. Long-range forces in heterogeneous fluid membranes. Europhys. Lett. 22:145-150.
48. Aranda-Espinoza, H., A. Berman, N. Dan, P. Pincus, and S. Safran. 1996. Interaction between inclusions embedded in membranes. Biophys. J. 71:648-656.
49. II transition. Biophys. J. 76:751-767.
50. Mouritsen, O. G., and M. Bloom. 1984. Mattress model of lipid-protein interactions in membranes. Biophys. J. 46:141-153.
51. Killian, J. 1998. Hydrophobic mismatch between proteins and lipids in membranes. Biochim. Biophys. Acta. 1376:401-416.
52. Lee, A. 2003. Lipid-protein interactions in biological membranes: a structural perspective. Biochim. Biophys. Acta. 1612:1-40.
53. 15N NMR. Biophys. J. 69:2392-2397.
54. 15N solid-state nuclear magnetic resonance. Biophys. J. 81:1684-1698.
55. Kessel, A., D. S. Cafiso, and N. Ben-Tal. 2000. Continuum solvent model calculations of alamethicin-membrane interactions: thermodynamic aspects. Biophys. J. 78:571-583.
56. Fox, R. O., Jr., and F. M. Richards. 1982. A voltage-gated ion channel model inferred from the crystal structure of alamethicin at 1.5-Å resolution. Nature. 300:325-330.
57. Breed, J., P. C. Biggin, I. D. Kerr, O. S. Smart, and M. S. P. Sansom. 1997. Alamethicin channels - modeling via restrained molecular dynamics simulations. Biochim. Biophys. Acta. 1325:235-249.
58. Venturoli, M., B. Smit, and M. M. Sperotto. 2005. Simulation studies of protein-induced bilayer deformations, and lipid-induced protein tilting, on a mesoscopic model for lipid bilayers with embedded proteins. Biophys. J. 88:1778-1798.
59. Nielsen, C., M. Goulian, and O. S. Andersen. 1998. Energetics of inclusion-induced bilayer deformations. Biophys. J. 74:1966-1983.
60. Sintes, T., and A. Baumgärtner. 1997. Protein attraction in membranes induced by lipid fluctuations. Biophys. J. 73:2251-2259.
61. May, S., and A. Ben-Shaul. 2000. A molecular model for lipid-mediated interaction between proteins in membranes. Phys. Chem. Chem. Phys. 2:4494-4502.
62. Feller, S. E., R. M. Venable, and R. W. Pastor. 1997. Computer simulation of a DPPC phospholipid bilayer: structural changes as a function of molecular surface area. Langmuir. 13:6555-6561.
63. Marčelja, S. 1999. Toward a realistic theory of the interaction of membrane inclusions. Biophys. J. 76:593-594.
64. Bohinc, K., V. Kralj-Igliè, and S. May. 2003. Interaction between two cylindrical inclusions in a symmetric lipid bilayer. J. Chem. Phys. 119:7435-7444.
65. Andersen, H. C., and D. Chandler. 1970. Mode expansion in equilibrium statistical mechanics. I. General theory and application to the classical electron gas. J. Chem. Phys. 53:547-554.
66. Hansen, J.-P., and I. R. McDonald. 1986. Theory of Simple Liquids, 2nd Ed. Academic Press, New York.