Cloning, characterization and computational analysis of the 5′ regulatory region of ovine glucose 6-phosphate dehydrogenase gene

Comparative Biochemistry and Physiology - B Biochemistry and Molecular Biology

Volumn 147, Issue 4, 2007, Pages 627-634

  Laliotis, George P ^a   Bizelis, Iosif ^a   Argyrokastritis, Alexandros ^a   Rogdakis, Emmanuel ^a  

^a AGRICULTURAL UNIVERSITY OF ATHENS   (Greece)

Author keywords

Cloning; G6PD; Promoter; Sheep; Transcription factors

Indexed keywords

GLUCOSE 6 PHOSPHATE DEHYDROGENASE; HEAT SHOCK PROTEIN; HEPATOCYTE NUCLEAR FACTOR 4; INSULIN RECEPTOR; PROGESTERONE RECEPTOR; PROLACTIN RECEPTOR; REGULATOR PROTEIN; RETINOIC ACID RECEPTOR; STEROL REGULATORY ELEMENT BINDING PROTEIN; TRANSCRIPTION FACTOR AP 2; TRANSCRIPTION FACTOR GATA; TRANSCRIPTION FACTOR SP1; UPSTREAM STIMULATORY FACTOR;

ARTICLE; GENE SEQUENCE; GENETIC ANALYSIS; HUMAN; HUMAN VERSUS ANIMAL COMPARISON; LIPOGENESIS; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; REGULATORY DNA SEQUENCE; SHEEP; SPECIES COMPARISON; TATA BOX;

MAMMALIA; OVIS; OVIS ARIES;

EID: 34250341196     PISSN: 10964959     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cbpb.2007.04.001     Document Type: Article

References (41)

1. Alcalay M., and Toniolo D. CpG islands of the X chromosome are gene associated. Nucleic Acids Res. 16 (1988) 9527-9543
2. Amemiya-Kudo M., Shimano H., Hasty A.H., Yahagi N., Yoshikawa T., et al. Transcriptional activities of nuclear SREBP-1a, -1c, and -2 to different target promoters of lipogenic and cholesterogenic genes. J. Lipid Res. 43 (2002) 1220-1235
3. Aranda A., and Pascual A. Nuclear hormones receptors and gene expression. Physiol. Rev. 81 (2001) 1269-1304
4. Arkwright-Keeler D.L., and Stapleton S.R. The glucose and insulin responsiveness of the rat glucose-6-phosphate dehydrogenase promoter requires an E-box sequence. FASEB J. 17 (2003) 102
5. Belk K.E., Savell J.W., Davis S.K., Taylor J.F., Womack J.E., and Smith S.B. Tissue-specific activity of pentose cycle oxidative enzymes during feeder lamp development. J. Anim. Sci. 71 (1993) 1796-1804
6. Beutler E. G6PD Deficiency. Blood 84 (1994) 3613-3636
7. Chawla A., Repa J., Evans R., and Mangelsdorf D. Nuclear receptors and lipid physiology: opening the X-files. Science 294 (2001) 1866-1870
8. Chen E.Y., Cheng A., Kuang W.J., Hillier L., Green P., Schlessinger D., Ciccodicola A., and D'Urso M. Sequence of human glucose-6-phosphate dehydrogenase cloned into plasmids and a yeast artificial chromosome. Genomics 10 (1991) 792-800
9. Fors L., Saavedra R.A., and Hood L. Cloning of the shark Po promoter using a genomic walking technique based on the polymerase chain reaction. Nucleic Acids Res. 18 (1990) 2793-2799
10. Ho Y.S., Howard A.J., and Crapo J.D. Cloning and sequence of a cDNA encoding rat glucose-6-phosphate dehydrogenase. Nucleic Acids Res. 16 (1988) 7746
11. Horton J.D. Sterol regulatory element-binding proteins: transcriptional activators of lipid synthesis. Biochem. Soc. Trans. 30 (2002) 1091-1095
12. Horton J.D., Shimomura I., Brown M.S., Hammer R.E., Goldstein J.L., and Shimano H. Activation of cholesterol synthesis in preference to fatty acid synthesis in liver and adipose tissue of transgenic mice over producing sterol regulatory element-binding protein-2. J. Clin. Invest. 101 (1998) 2331-2339
13. Kersten S. Mechanisms of nutritional and hormonal regulation of lipogenesis. EMBO Rep. 2 (2001) 282-286
14. Kim H.J., Takahasi M., and Ezaki O. Fish oil feeding decreases mature sterol regulatory element binding protein-1 (SREBP-1) by down regulation of SREBP-1c mRNA in mouse liver. A possible mechanism for down regulation of lipogenic enzyme mRNAs. J. Biol. Chem. 274 (1999) 25892-25898
15. Kletzien R., Harris P., and Foellmi L. Glucose-6-phosphate dehydrogenase: a "housekeeping" enzyme subjected to tissue-specific regulation by hormones, nutrients and oxidant stress. FASEB J. 8 (1994) 174-181
16. Kochan Z. Increased lipogenic potential of rat adipose tissue after repeated dieting-the role of SREBP-1 transcription factor. Cell. Mol. Biol. Lett. 8 (2003) 901-909
17. Koustrouni E., Pegiou T., Gardiki P., and Trakatelis A. Activity changes of glucose-6-phosphate dehydrogenase in response to diet and insulin. Int. J. Biochem. 16 (1984) 1353-1358
18. Laliotis G.P., Argyrokastritis A., Bizelis I., and Rogdakis E. Cloning and characterization of an alternative transcript of ovine glucose 6-phosphate dehydrogenase gene: comparative approach between ruminant and nonruminant species. Gene 388 (2007) 93-101
19. Martini G., Toniolo D., Vulliamy T., Luzzatto L., Dono R., Viglietto G., Paonessa G., D'Urso M., and Persico M.G. Structural analysis of the X-linked gene encoding human glucose 6-phosphate dehydrogenase. EMBO J. 5 (1986) 1849-1855
20. Nishiyama J., Yi X., Venkatachalam M.A., and Dong Z. cDNA cloning and promoter analysis of rat caspase-9. Biochem. J. 360 (2001) 49-56
21. Panopoulou E., Deligiorgis S.G., Papadimitriou T., and Rogdakis E. Carcass composition, size of fat cells and NADPH-generating dehydrogenases activity in adipose tissue of the fat tailed Chios and the thin tailed Karagouniko sheep breed. J. Anim. Breed. Genet. 106 (1989) 51-58
22. Persico M.G., Viglietto G., Martini G., Toniolo D., Paonessa G., Moscatelli C., Dono R., Vulliamy T., Luzzatto L., and D'Urso M. Isolation of human G6PD cDNA clones: primary structure of the protein and an unusual 5′ noncoding region. Nucleic Acids Res. 14 (1986) 2511-2522
23. Philippe M., Larondelle Y., Lemaigre F., Mariame B., Delhez H., Mason P., Luzzato L., and Rousseau G. Promoter function of the human glucose-6-phosphate dehydrogenase gene depends on two GC boxes that are cell specifically controlled. Eur. J. Biochem. 226 (1994) 377-384
24. Rank K., Harris P., Ginsberg L., and Stapleton S. Isolation and sequence of a rat glucose-6-phosphate dehydrogenase promoter. Biochem. Biophys. Acta 1217 (1994) 90-92
25. Rogdakis E. Selektion nach der Activität NADPH-liefernder Enzyme im Fettgewebe des Schweines. I. Versuchsfrage, Versuchsanlage und erste Ergebnisse. Z. Tierz. Zuchtungsbiol. 99 (1982) 241-252
26. Rogdakis E., Charismiadou M., Orphanos S., Panopoulou E., and Bizelis J. Cellularity and enzymatic activity of adipose tissue in the Karagouniko dairy breed of sheep from birth to maturity. J. Anim. Breed. Genet. 114 (1997) 385-396
27. Sean B.J., Laffitte B.A., Patel P.H., Watson M.A., Matsukuma K.A., Walczak R., Collins J.L., Osborne T.F., and Tontonoz P. Direct and indirect mechanisms for regulation of fatty acid synthase gene expression by liver X receptors. J. Biol. Chem. 227 (2002) 11019-11025
28. Siebert P.D., Chenchik A., Kellogg D.E., Lukyanov K.A., and Lukyanov S.A. An improved PCR method fort walking in uncloned genomic DNA. Nucleic Acids Res. 23 (1995) 1087-1088
29. Shih H.M., Liu Z., and Towle H.C. Two CACGGT motifs with proper spacing dictate the carbohydrate regulation of hepatic gene transcription. J. Biol. Chem. 270 (1995) 21994-21997
30. Shimano H., Yahagi N., Kudo M., Hasty A.H., Osuga J., Tamura Y., Shionoiri F., Iizuka Y., Ohashi K., Harada K., Gotoda T., Ishibashi S., and Yamada N. Sterol regulatory element-binding protein-1 as a key transcription factor for nutritional induction of lipogenic enzyme genes. J. Biol. Chem. 274 (1999) 35832-35839
31. Stapleton S.R., Stevens G.J., Teel J.F., Rank K.B., Berg E.A., Wu J.Y., Ginsberg L.C., and Kletzien R.F. Effects of acetaldehyde on glucose-6-phosphate dehydrogenase activity and mRNA levels in primary rat hepatocytes in culture. Biochimie 75 (1993) 971-976
32. Stroup D., and Chiang J.Y. HNF4 and COUP-TFII interact to modulate transcription of the cholesterol 7a-hydroxylase gene (CYP7A1). J. Lipid Res. 41 (2000) 1-11
33. Stumpo D.J., and Kletzien R.F. The effect of ethanol, alone and in combination with the glucorticoids and insulin, on glucose-6-phosphate dehydrogenase synthesis and mRNA in primary cultures of hepatocytes. Biochem. J. 226 (1985) 123-130
34. Sul H., Latasa M., Moon Y., and Kim K.H. Regulation of the fatty acid synthase promoter by insulin. J. Nutr. 130 (2000) 315-320
35. Tarling E., Salter A., and Bennett A. Transcriptional regulation of human SREBP-1c (sterol-regulatory-element-binding-protein-1c): a key regulator of lipogenesis. Biochem. Soc. Trans. 32 (2004) 107-109
36. Thomson J.M., and Butterfield R.M. Changes in body composition relative to weight and maturity of Australian Dorset Horn rams and wethers. 4. Adipose tissue and number in dissected fat partions. Anim. Prod. 46 (1988) 387-393
37. Toniolo D., Filippi M., Dono R., Lettieri T., and Martini G. The CpG island in the 5′ region of the G6PD gene of man and mouse. Gene 102 (1991) 197-203
38. Travers M., Vallance A., Gourlay H., Gill C., Klein I., Bottema C., and Barber M. Promoter I of ovine acetyl-coA carboxylase-a gene: an E-box motif at-114 in the proximal promoter binds upstream stimulatory factor (USF)-1 and USF-2 and acts as an insulin-response sequence in differentiating adipocytes. Biochem. J. 359 (2001) 273-284
39. Vernon R.G. Lipid metabolism in the adipose tissue of ruminant animals. In: Christie W.W. (Ed). Lipid Metabolism in Ruminant Animal (1981), Pergamon, Oxford, New York 279-362
40. Wang D., and Sul H.S. Upstream stimulatory factor binding to E-box at - 65 is required for insulin regulation of the fatty acid synthase promoter. J. Biol. Chem. 272 (1997) 26367-26374
41. Zollo M.Z., D'Urso M., Schlessinger D., and Chen E.Y. Sequence of mouse glucose 6-phosphate dehydrogenase cDNA. DNA Seq. 3 (1993) 319-322