A hard constraint algorithm to model particle interactions in DNA-laden flows

Nanoscale and Microscale Thermophysical Engineering

Volumn 11, Issue 1-2, 2007, Pages 121-128

  Trebotich, D ^a   Miller, G H ^b   Bybee, M D ^c  

^a LAWRENCE LIVERMORE NATIONAL LABORATORY   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

^c UNIVERSITY OF ILLINOIS AT URBANA CHAMPAIGN   (United States)

Author keywords

Fluid polymer coupling; Microfluidics; Multiscale computational modeling; Navier Stokes; Viscoelasticity

Indexed keywords

CONSTRAINT ALGORITHM; MULTISCALE COMPUTATIONAL MODELING; POLYMER MODEL;

ALGORITHMS; COMPUTATIONAL METHODS; COMPUTER SIMULATION; CONSTRAINT THEORY; MATHEMATICAL MODELS; MICROFLUIDICS; NAVIER STOKES EQUATIONS; VISCOELASTICITY;

DNA;

EID: 34250162803     PISSN: 15567265     EISSN: None     Source Type: Journal    
DOI: 10.1080/15567260701337423     Document Type: Article

References (9)

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2. D. Trebotich, P. Colella, and G.H. Miller, A. Stable and Convergent Scheme for Viscoelastic Flow in Contraction Channels, Journal of Computational Physics, Vol. 205, pp. 315-342, 2005.
3. D. Trebotich and G.H. Miller, Modeling and Simulation of DNA Flow in a Microfluidic-Based Pathogen Detection System, Proceedings of the 3rd Annual IEEE EMBS Special Topic Conference on Microtechnologies in Medicine and Biology, pp. 353-355, 2005.
4. E.C. Lee and S.J. Muller, Flow Light Scattering Studies of Polymer Coil Conformation in Solutions in Extensional Flow, Macromolecules, Vol. 32, pp. 3295-3305, 1999.
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6. M. Mazars, Freely Jointed Chains in External Potentials: Analytical Computations, Journal of Physics A: Mathematical and General, Vol. 32, pp. 1841-1861, 1999.
7. M.D. Bybee, G.H. Miller, and D. Trebotich, Particle Interactions in DNA Flows, Technical Report UCRL-TR-217843, Lawrence Livermore National Laboratory, Livermore, California, USA, December 2005.
8. S. Kumar and R. G. Larson, Brownian Dynamics Simulations of Flexible Polymers with Spring-Spring Repulsions, Journal of Chemical Physics, Vol. 114(15), pp. 6937-6941, 2001.
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