A specific polymerase chain reaction based on the gyrB gene sequence and subsequent restriction fragment length polymorphism analysis of Pasteurella pneumotropica isolates from laboratory mice

Journal of the American Association for Laboratory Animal Science

Volumn 46, Issue 2, 2007, Pages 54-58

  Hayashimoto, Nobuhito ^a   Ueno, Masami ^a   Takakura, Akira ^a   Itoh, Toshio ^a  

^a CENTRAL INSTITUTE FOR EXPERIMENTAL ANIMALS   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

DNA TOPOISOMERASE (ATP HYDROLYSING) B; DNA TOPOISOMERASE (ATP HYDROLYSING); PRIMER DNA; RESTRICTION ENDONUCLEASE; RNA 16S;

ARTICLE; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATE; BASE PAIRING; GENE AMPLIFICATION; GENE SEQUENCE; HEMOLYSIS; MOUSE; NONHUMAN; NUCLEOTIDE SEQUENCE; PASTEURELLA PNEUMOTROPICA; POLYMERASE CHAIN REACTION; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; RNA SEQUENCE; SEROTYPE; ANIMAL; CHEMISTRY; CLASSIFICATION; GENETICS; ISOLATION AND PURIFICATION; METHODOLOGY; MICROBIOLOGY; MOLECULAR GENETICS; MOUSE STRAIN; PHENOTYPE;

BACTERIA (MICROORGANISMS); MUS; PASTEURELLA PNEUMOTROPICA;

ANIMALS; BACTERIAL TYPING TECHNIQUES; DNA GYRASE; DNA PRIMERS; DNA RESTRICTION ENZYMES; MICE; MICE, INBRED STRAINS; MOLECULAR SEQUENCE DATA; PASTEURELLA PNEUMOTROPICA; PHENOTYPE; POLYMERASE CHAIN REACTION; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; RNA, RIBOSOMAL, 16S;

EID: 34249845232     PISSN: 15596109     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (21)

1. tmlMak mice. Contemp Top Lab Anim Sci 39(1):39-41.
2. Boot R, Bisgaard M. 1995. Reclassification of 30 Pasteurellaceae strains isolated from rodents. Lab Anim 29:314-319.
3. Bootz F, Kirschenk S, Nicklas W, Wyss SK, Homberger FR. 1998. Detection of Pasteurellaceae in rodents by polymerase chain reaction analysis. Lab Anim Sci 48:542-546
4. Goelz MF, Thigpen JE, Mahler J, Rogers WP, Locklear J, Weigler BJ, Forsythe DB. 1996. Efficacy of various therapeutic regimens in eliminating Pasteurella pneumotropica from the mouse. Lab Anim Sci 46:280-285.
5. Hayashimoto N, Aiba T, Itoh K, Kato M, Kawamoto E, Kiyokawa S, Morichika, Y, Muraguchi T, Narita T, Okajima Y, Takakura A, Itoh T. 2005. Identification procedure for Pasteurella pneumotropica in microbiologic monitoring of laboratory animals. Exp Anim 54:123-129.
6. Hayashimoto N, Takakura A, Itoh T. 2005. Genetic diversity on 16S rDNA sequence and phylogenetic tree analysis in Pasteurella pneumotropica strains isolated from laboratory animals. Curr Microbiol 51:239-243.
7. Hayashimoto N, Ueno M, Takakura A, Itoh T. 2006. Phylogenetic analysis of isolates of Pasteurella pneumotropica from laboratory animals based on gyrB gene sequence. Exp Anim 55:487-490.
8. Kodjo A, Villard L, Veillet F, Escande F, Borges E, Maurin F, Bonnod J, Richard Y. 1999. Identification by 16S rDNA fragment amplification and detection of genetic diversity by random am-plified polymorphic DNA analysis of Pasteurella pneumotropica isolated from laboratory rodents. Lab Anim Sci 49:49-53.
9. Macy JD Jr, Weir EC, Compton SR, Shlomchik MJ, Brownstein DG. 2000. Dual infection with Pneumocystis carinii and Pasteurella pneumotropica in B cell-deficient mice: diagnosis and therapy. Lab Anim Sci 50:49-55.
10. Moore GJ, Aldred P. 1978. Treatment of Pasteurella pneumotropica abscesses in nude mice (nu/nu). Lab Anim 12:227-228.
11. Needham JR, Cooper JE. 1975. An eye infection in laboratory mice associated with Pasteurella pneumotropica. Lab Ani. 9:197-200.
12. Nozu R, Goto K, Ohashi H, Takakura A, Itoh T. 1999. Evaluation of PCR as a means of identification of Pasteurella pneumotropica. Exp Anim 48:51-54.
13. Pearson WR, Lipman DJ. 1988. Improved tools for biological sequence comparison. Proc Natl Acad Sci USA. 85: 2444-2448.
14. Sasaki H, Kawamoto E, Okiyama E, Ueshiba H, Mikazuki K, Amao H, Sawada, T. 2006. Molecular typing of Pasteurella pneumotropica isolated from rodents by amplified 16S ribosomal DNA restriction analysis and pulsed-field gel electrophoresis. Microbiol Immunol 50:265-272.
15. Sasaki H, Kawamoto E, Ueshiba H, Amao H, Sawada T. 2006. Phylogenetic relationship of Pasteurella pneumotropica isolates from laboratory rodents based on 16S rDNA sequence. J Vet Med Sci 68:639-641.
16. Suzuki M, Nakagawa Y, Harayama S, Yamamoto S. 2001. Phylogenetic analysis and taxonomic study of marine Cytophaga-like bacteria: proposal for Tenacibaculum gen. nov. with Tenaccibaculum martimum comb. nov. and Tenabaculum ovolyticum comb, nov., and description of Tenacibaculum mesophilum sp. nov. and Tenacibaculum amyloyticum sp. nov. Int J Syst Bacteriol 51:1639-1652.
17. Venkateswaran K, Dohmoto N, Harayama S. 1998. Cloning and nucleotide sequence of the gyrB gene of Vibrio parahaemolyticus and its application in detection of this pathogen in shrimp. Appl Environ Microbiol 64:681-687.
18. Wang R-F, Campbell W, Cao W-W, Summage C, Steele RS, Cerniglia CE. 1996. Detection of Pasteurella pneumotropica in laboratory mice and rats by polymerase chain reaction. Lab Anim Sci 46:81-85.
19. Ward GE, Moffat R, Olfert E. 1978. Abortion in mice associated Pasteurella pneumotropica. J Clin Microbiol 8:177-180.
20. Weigler BJ, Thigpen JE, Goelz MF, Babineau CA, Forsythe DB. 1996. Randomly amplified polymorphic DNA polymerase chain reaction assay for molecular epidemiologic investigation of Pasteurella pneumotropica in laboratory rodent colonies. Lab Anim Sci 46:386-392.
21. Yamamoto S, Harayama S. 1995. PCR amplification and direct sequencing of gyrB genes with universal primers and their application to the detection and taxonomic analysis of Pseudomonas putida strains. Appl Environ Microbiol 61:1104-1109.