2-DE proteomic analysis of the model cyanobacterium Anabaena variabilis

Electrophoresis

Volumn 28, Issue 10, 2007, Pages 1624-1632

  Barrios Llerena, Martin E ^a,c   Reardon, Kenneth F ^b   Wright, Philip C ^a  

^a UNIVERSITY OF SHEFFIELD   (United Kingdom)

^b Engineering Research Center and Hydraulics Laboratory   (United States)

^c UNIVERSITY OF EDINBURGH   (United Kingdom)

Author keywords

2 DE gel; Cyanobacteria; MS; Theoretical proteome

Indexed keywords

BACTERIA; BIOINFORMATICS; METABOLITES; MOLECULAR BIOLOGY; NITROGEN FIXATION;

2-DE GEL; BIOINFORMATIC TOOLS; CYANOBACTERIUM; CYANOBACTERIUM ANABAENA; MS; PHARMACEUTICAL APPLICATIONS; PHOTOSYNTHETIC BACTERIAS; PROTEOMIC ANALYSIS; SECONDARY METABOLITES; THEORETICAL PROTEOME;

PROTEINS;

BACTERIAL PROTEIN; BUFFER; NITROGEN; PROTEOME;

ANABAENA VARIABILIS; ARTICLE; BACTERIAL STRAIN; BIOINFORMATICS; CONTROLLED STUDY; CYANOBACTERIUM; ELECTROSPRAY MASS SPECTROMETRY; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; HYDROPHOBICITY; NONHUMAN; PROTEIN DETERMINATION; PROTEIN ISOLATION; PROTEIN LOCALIZATION; PROTEOMICS; SYNECHOCYSTIS; TWO DIMENSIONAL ELECTROPHORESIS;

EID: 34249808498     PISSN: 01730835     EISSN: 15222683     Source Type: Journal    
DOI: 10.1002/elps.200600597     Document Type: Article

References (41)

1. Whitton, B. A., in: Mann, N. H., Carr, N. G. (Eds.), Photosynthetic Prokaryotes, Plenum Press, New York 1992, p. 1-51.
2. Cournac, L., Guedeney, G., Peltier, G., Vignais, P. M., J. Bacteriol. 2004, 186, 1737-1746.
3. Borodin, V. B., Tsygankov, A. A., Rao, K. K., Hall, D. O., Biotechnol. Bioeng. 2000, 69, 478-485.
4. Kumazawa, S., Mar. Biotechnol. (NY) 2003, 5, 222-226.
5. Burja, A. M., Banaigs, B., Abou-Mansour, E., Burgess, J. G., Wright, P. C., Tetrahedron 2001, 57, 9347-9377.
6. Barrios-Llerena, M. E., Chong, P. K., Gan, C. S., Snijders, A. P, Reardon, K. F. et al., Brief Funct. Genomic. Proteomic. 2006, 5, 121-132.
7. Gan, C. S., Reardon, K. F., Wright, P. C., Proteomics 2005, 5, 2468-2478.
8. Celis, J. E., Gromov, P., Curr. Opin. Biotechnol. 1999, 10, 16-21.
9. Hanash, S. M., Electrophoresis, 2000, 21, 1202-1209.
10. Fulda, S., Mikkat, S., Huang, F., Huckauf, J. et al., Proteomics 2006, 6, 2733-2745.
11. Kurian, D., Phadwal, K., Maenpaa, P., Proteomics 2006, 6, 3614-3624.
12. Huang, F., Fulda, S., Hagemann, M., Norling, B., Proteomics 2006, 6, 910-920.
13. Srivastava, R., Pisareva, T., Norling, B., Proteomics 2005, 5, 4905-4916.
14. Huang, F., Hedman, E., Funk, C., Kieselbach, T. et al., Mol. Cell. Proteomics 2004, 3, 586-595.
15. Huang, F., Parmryd, I., Nilsson, F., Persson, A. L. et al, B., Mol. Cell Proteomics 2002, 1, 956-966.
16. Fulda, S., Huang, F, Nilsson, F., Hagemann, M., Norling, B., Eur J. Biochem. 2000, 267, 5900-5907.
17. Wang, Y., Sun, J., Chitnis, P. R., Electrophoresis 2000, 21, 1746-1754.
18. Ehling-Schulz, M., Schulz, S., Wait, R., Görg, A., Scherer, S., Mol. Microbiol. 2002, 46, 827-843.
19. Hunsucker, S. W., Klage, K., Slaughter, S. M., Potts, M., Helm, R. F., Biochem. Biophys. Res. Commun. 2004, 317, 1121-1127.
20. Zahalak, M., Pratte, B., Werth, K. J., Thiel, T., Mol. Microbiol. 2004, 51, 539-549.
21. Thiel, T., Pratte, B., Zahalak, M., Arch. Microbiol. 2002, 179, 50-56.
22. Görg, A., Obermaier, C., Boguth, G., Harder, A. et al., Electrophoresis 2000, 21, 1037-1053.
23. Perkins, D. N., Pappin, D. J., Creasy, D. M., Cottrell, J. S., Electrophoresis 1999, 20, 3551-3567.
24. Kyte, J., Doolittle, R. F., J. Mol. Biol. 1982, 157, 105-132.
25. Gasteiger, E., Hoogland, C., Gattiker, A., Duvaud, S., in: J. M. Walker (Ed.), The Proteomics Protocols Handbook, Humana Press, Hatfield, Herts, UK 2005, p. 571-607.
26. Gardy, J. L., Laird, M. R., Chen, F., Rey, S. et al., Bioinformatics 2005, 21, 617-623.
27. Juncker, A. S., Willenbrock, H., von Heijne, G., Brunak, S. et al., Protein Sci. 2003, 12, 1652-1662.
28. Rappsilber, J., Ryder, U., Lamond, A. I., Mann, M., Genome Res. 2002, 12, 1231-1245.
29. Ishihama, Y., Oda, Y., Tabata, T., Sato, T. et al., Mol Cell Proteomics 2005, 4, 1265-1272.
30. Klammt, C., Schwarz, D., Fendler, K., Haase, W. et al., FEBS J. 2005, 272, 6024-6038.
31. Kim, D. W., Chater, K. F., Lee, K. J., Hesketh, A., Microbiology 2005, 157, 2707-2720.
32. Nouwens, A. S., Cordwell, S. J., Larsen, M. R., Molloy, M. P. et al., Electrophoresis 2000, 21, 3797-3809.
33. Molloy, M. P., Herbert, B. R., Slade, M. B., Rabilloud, T. et al., Eur. J. Biochem. 2000, 267, 2871-2881.
34. Li, H., Sherman, L. A., Arch. Microbiol. 2002, 178, 256-266.
35. Grantt, E., The Molecular Biology of Cyanobacteria, Kluwer Academic Publishers, Dordrecht, The Netherlands 1994, p. 916.
36. Zhou, M., Lucas, D. A., Chan, K. C., Issaq, H. J. et al., Electrophoresis 2004, 25, 1289-1298.
37. Gardy, J. L., Spencer, C., Wang, K., Ester, M. et al., Nucleic. Acids Res. 2003, 31, 3613-3617.
38. Schwartz, R., Ting, C. S., King, J., Genome Res. 2001, 11, 703-709.
39. Bae, S. H., Harris, A. G., Hains, P. G., Chen, H. et al., Proteomics 2003, 3, 569-579.
40. Li, H., Sherman, L. A., Arch. Microbiol. 2002, 178, 256-266.
41. Bunai, K., Yamane, K., J. Chromatogr. B 2005, 815, 227-236.