Correlation of electron transfer rate in photosynthetic reaction centers with intraprotein dielectric properties

Biochimica et Biophysica Acta - Bioenergetics

Volumn 1767, Issue 6, 2007, Pages 441-448

  Chamorovsky, Sergey K ^a   Cherepanov, Dmitry A ^b   Chamorovsky, Constantin S ^a   Semenov, Alexey Yu ^a  

^a MOSCOW STATE UNIVERSITY   (Russian Federation)

^b FRUMKIN INSTITUTE OF PHYSICAL CHEMISTRY AND ELECTROCHEMISTRY   (Russian Federation)

Author keywords

Dielectric permittivity; Marcus theory; Photoelectric activity; Photosynthetic reaction center; Rate constant

Indexed keywords

ARGININE; ASPARTIC ACID; GLUTAMIC ACID; HISTIDINE; LYSINE; MEMBRANE PROTEIN;

AMINO ACID SEQUENCE; CALCULATION; CORRELATION ANALYSIS; CRYSTAL STRUCTURE; CYANOBACTERIUM; DIELECTRIC CONSTANT; ELECTRON TRANSPORT; ENERGY; MEASUREMENT; NONHUMAN; PHOTOSYNTHESIS; PRIORITY JOURNAL; QUANTITATIVE ANALYSIS; REACTION ANALYSIS; REVIEW; SYNECHOCOCCUS ELONGATUS; THERMOSYNECHOCCUS VULCANUS; TIME;

ELECTROCHEMISTRY; ELECTRON TRANSPORT; KINETICS; PHOTOSYNTHETIC REACTION CENTER COMPLEX PROTEINS; PHOTOSYSTEM I PROTEIN COMPLEX; PHOTOSYSTEM II PROTEIN COMPLEX;

BACTERIA (MICROORGANISMS);

EID: 34249797592     PISSN: 00052728     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbabio.2007.01.008     Document Type: Review

References (70)

1. +-ATPase and bacteriorhodopsin. Nature 249 (1974) 321-324
2. Drachev L.A., Kaulen A.D., Khitrina L.V., and Skulachev V.P. Fast stages of photoelectric processes in biological membranes: I. Bacteriorhodopsin. Eur. J. Biochem. 117 (1981) 461-470
3. Drachev L.A., Semenov A.Yu., Skulachev V.P., Smirnova I.A., Chamorovsky S.K., Kononenko A.A., Rubin A.B., and Uspenskaya N.Ya. Fast stages of photoelectric processes in biological membranes: III. Bacterial photosynthetic redox system. Eur. J. Biochem. 117 (1981) 483-489
4. Mamedov M.D., Gadjieva R.M., Gourovskaya K.N., Drachev L.A., and Semenov A.Yu. Electrogenicity at the donor/acceptor sides of cyanobacterial photosystem I. J. Bioenerg. Biomembr. 28 (1996) 517-522
5. Vassiliev I.R., Jung Y.-S., Mamedov M.D., Semenov A.Yu., and Golbeck J.H. Near-IR absorbance changes and electrogenic reactions in the microsecond-to-second time domain in photosystem I. Biophysical. J. 72 (1997) 301-315
6. Mamedov M.D., Lovyagina E.R., Verkhovsky M.I., Semenov A.Yu., Cherepanov D.A., and Shinkarev V.P. Generation of the electrical potential difference by photosystem II from thermophilic cyanobacteria. Biochemistry (Moscow) 59 (1995) 327-341
7. Semenov A.Yu., Mamedov M.D., and Chamorovsky S.K. Photoelectric studies of the transmembrane charge transfer reactions in photosystem I pigment-protein complexes. FEBS Lett. 553 (2003) 223-228
8. Semenov A.Yu., Chamorovsky S.K., and Mamedov M.D. Electrogenic reactions in photosystem I complexes. Biofizika 49 (2004) 227-238
9. Semenov A.Yu., Mamedov M.D., and Chamorovsky S.K. Electrogenic reactions associated with electron transfer in photosystem I. In: Golbeck J.H. (Ed). The Light-driven Plastocyanin (2006), Springer 319-338
10. Chamorovsky C.S., Chamorovsky S.K., and Semenov A.Yu. Dielectric and photoelectric properties of photosynthetic reaction centers. Biochemistry (Moscow) 70 (2005) 315-322
11. Jordan P., Fromme P., Klukas O., Witt H.T., Saenger W., and Krauss N. Three-dimensional structure of cyanobacterial photosystem I at 2.5 Å resolution. Nature 411 (2001) 909-917
12. Fromme P., Schubert W.D., and Krauss N. Structure of photosystem I: suggestions on the docking sites for plastocyanin, ferredoxin and the coordination of P700. Biochim. Biophys. Acta 1187 (1994) 99-105
13. Myshkin E., Leontis N.B., and Bullerjahn S. Computational simulation of the docking of Prochlorothrix hollandica plastocyanin to photosystem I: modeling the electron transfer complex. Biophys. J. 82 (2002) 3305-3313
14. - formation. Biochemistry 33 (1994) 8619-8624
15. Leibl W., Toupance B., and Breton J. Photoelectric characterization of forward electron transfer to iron-sulfur centers in photosystem I. Biochemistry 34 (1995) 10237-10244
16. Diaz-Quintana A., Leibl W., Bottin H., and Setif P. Electron transfer in photosystem I reaction centers follows a linear pathway in which iron-sulfur cluster FB is the immediate electron donor to soluble ferredoxin. Biochemistry 37 (1998) 3429-3439
17. Mamedov M.D., Gourovskaya K.N., Vassiliev I.R., Golbeck J.H., and Semenov A.Yu. Electrogenicity accompanies photoreduction of the iron-sulfur clusters FA and FB in photosystem I. FEBS Lett. 431 (1998) 219-223
18. Mamedov M.D., Mamedova A.A., Chamorovsky S.K., and Semenov A.Yu. Electrogenic reduction of the primary electron donor P700 by plastocyanin in photosystem I complexes. FEBS Lett. 500 (2001) 172-176
19. Mamedova A.A., Mamedov M.D., Gourovskaya K.N., Vassiliev I.R., Golbeck J.H., and Semenov A.Yu. Electrometrical study of electron transfer from the terminal FA/FB iron-sulfur clusters to external acceptors in photosystem I. FEBS Lett. 462 (1999) 421-424
20. Antonkine M.L., Jordan P., Fromme P., Krauss N., Golbeck J.H., and Stehlik D. Assembly of protein subunits in stromal ridge of photosystem I. Structural changes between unbound and sequentially PS I-bound polypeptides and correlated changes of magnetic properties of terminal iron sulfur centers. J. Mol. Biol. 327 (2003) 671-697
21. Zouni A., Witt H.-T., Kern J., Fromme P., Krauss N., Saenger W., and Orth P. Crystal structure of photosystem II from Synechococcus elongatus at 3.8 Å resolution. Nature 409 (2001) 739-743
22. Kamiya N., and Shen J.-R. Crystal structure of oxygen-evolving photosystem II from Thermosynechococcus valcanus at 3.7 Å resolution. Proc. Natl. Acad. Sci. U. S. A. 100 (2003) 98-103
23. Ferreira K.N., Iverson T.M., Maghlaoui K., Barber J., and Iwata S. Architecture of the photosynthetic oxygen-evolving centre. Science 303 (2004) 1831-1838
24. Loll B., Kern J., Saenger W., Zouni A., and Biesiadka J. Towards complete cofactor arrangement in the 3.0 Å resolution structure of photosystem II. Nature 438 (2005) 1040-1044
25. Trissl H.-W., and Leibl W. Primary charge separation in photosystem II involves two electrogenic steps. FEBS Lett. 244 (1989) 85-88
26. Leibl W., Breton J., Deprez J., and Trissl H.-W. Photoelectric study on the kinetics of trapping and charge stabilization in oriented PS II membranes. Photosynth. Res. 22 (1989) 257-275
27. Pokorny A., Wulf K., and Trissl H.-W. An electrogenic reaction associated with the re-reduction of P680 by Tyr Z in Photosystem II. Biochim. Biophys. Acta 1184 (1994) 65-70
28. Haumann M., Mulkidjanian A., and Junge W. Electrogenicity of electron and proton transfer at the oxidizing side of photosystem II. Biochemistry 36 (1997) 9304-9315
29. Mamedov M.D., Beshta O.E., Gourovskaya K.N., Mamedova A.A., Neverov K.D., Samuilov V.D., and Semenov A.Yu. Photoelectric responses of oxygen-evolving complexes of photosystem II. Biochemistry (Moscow) 64 (1999) 504-509
30. Mamedov M.D., Beshta O.E., Samuilov V.D., and Semenov A.Yu. Electrogenicity at the secondary quinone acceptor site of cyanobacterial photosystem II. FEBS Lett. 350 (1994) 96-98
31. Hook F., and Brzezinski P. Light-induced voltage changes associated with electron and proton transfer in photosystem II core complexes reconstituted in phospholipid monolayers. Biophys. J. 66 (1994) 2066-2072
32. Rappaport F., Guergova-Kuras M., Nixon P.J., Diner B.A., and Laverhne J. Kinetics and pathways of charge recombination in photosystem II. Biochemistry 41 (2002) 8518-8527
33. B in spinach photosystem II complexes incorporated into lipid vesicles. Biochemistry (Moscow) 70 (2005) 1348-1353
34. Dracheva S.M., Drachev L.A., Konstantinov A.A., Semenov A.Yu., Skulachev V.P., Arutyunian A.M., Shuvalov V.A., and Zaberezhnaya S.M. Electrogenic steps in the redox reactions catalyzed by photosynthetic reaction-centre complex from Rhodopseudomonas viridis. Eur. J. Biochem. 171 (1988) 253-264
35. Semenov A.Yu. Electrogenic reactions in photosynthetic reaction centers of purple bacteria. In: Skulachev V.P. (Ed). Electrogenic Reactions in Photosynthetic Reaction Centres of Purple Bacteria, Soviet scientific reviews/section D, 10 (1991), Harwood Academic Publishers 45-75
36. Kaminskaya O.P., Drachev L.A., Konstantinov A.A., Semenov A.Yu., and Skulachev V.P. Electrogenic reduction of the secondary quinone acceptor in chromatophores of Rhodospirillum rubrum: rapid kinetics measurements. FEBS Lett. 202 (1986) 224-228
37. Shinkarev V.P., Drachev L.A., Mamedov M.D., Mulkidjanian A.Ya., Semenov A.Yu., and Verkhovsky M.I. Effect of pH and surface potential on the rate of electric potential generation due to proton uptake by secondary quinone acceptor of reaction centers in Rhodobacter sphaeroides chromatophores. Biochim. Biophys. Acta 1144 (1993) 285-294
38. Dogonadze R.R., and Urushadze Z.D. Semiclassical method of calculation of chemical reactions proceeding in polar liquids. J. Electroanal. Chem. 32 (1971) 234-245
39. Marcus R.A., and Sutin N. Electron transfer in chemistry and biology. Biochim. Biophys. Acta 811 (1985) 265-322
40. Cherepanov D.A., Krishtalik L.I., and Mulkidjanian A.Y. Photosynthetic electron transfer controlled by protein relaxation: analysis by Langevin stochastic approach. Biophys. J. 80 (2001) 1033-1049
41. Cherepanov D.A., Bibikov S.I., Bibikova M.V., Bloch D.A., Drachev L.A., Gopta O.A., Oesterhelt D., Semenov A.Y., and Mulkidjanian A.Y. Reduction and protonation of the secondary quinone acceptor of Rhodobacter sphaeroides photosynthetic reaction center: kinetic model based on a comparison of wild-type chromatophores with mutants carrying Arg → Ile substitution at sites 207 and 217 in the L-subunit. Biochim. Biophys. Acta 1459 (2000) 10-34
42. 680 reduction in photosystem II. In: Garab G. (Ed). Photosynthesis: Mechanism and Effects (1998), Kluwer Acad. Publishers, The Netherlands 1073-1076
43. 680 reduction pattern and its temperature dependence in oxygen-evolving PS II core complexes from thermophilic cyanobacteria and higher plants. Phys. Chem. Chem. Phys. 6 (2004) 4838-4843
44. Sigfridsson E., Olsson M.H.M., and Ryde U. A comparison of the inner-sphere reorganisation energies of cytochromes, iron-sulphur clusters, and blue copper proteins. J. Phys. Chem., B 105 (2001) 5546-5552
45. Steffen M.A., Lao K., and Boxer S.G. Dielectric Asymmetry in the Photosynthetic Reaction Center. Science 264 (1994) 810-816
46. Rocchia W., Sridharan S., Nicholls A., Alexov E., Chiabrera A., and Honig B. Rapid grid-based construction of the molecular surface for both molecules and geometric objects: applications to the finite difference Poisson-Boltzmann method. J. Comp. Chem. 23 (2002) 128-137
47. Winkler J.R., and Gray H.B. Electron tunneling in proteins: role of the intervening medium. J. Biol. Inorg. Chem. 2 (1997) 399-404
48. Moser C.C., Keske J.M., Warncke K., Farid R.S., and Dutton P.L. Nature of biological electron transfer. Nature 355 (1992) 796-802
49. Marcus R.A. Reorganization free energy for electron transfers at liquid-liquid and dielectric semiconductor-liquid interfaces. J. Phys. Chem. 94 (1990) 1050-1055
50. Chen I.-P., Mathis P., Koepke J., and Michel H. Uphill electron transfer in the tetraheme cytochrome subunit of the Rhodopseudomonas viridis photosynthetic reaction center: evidence from site-directed mutagenesis. Biochemistry 39 (2000) 3592-3602
51. Dracheva S.M., Drachev L.A., Zaberezhnaya S.M., Konstantinov A.A., Semenov A.Yu., and Skulachev V.P. Spectral, redox and kinetic characteristics of high-potential cytochrome c hemes in Rhodopseudomonas viridis reaction center. FEBS Lett. 205 (1986) 41-46
52. Lauterwasser C., Finkele U., Scheer H., and Zinth W. Temperature dependence of the primary electron transfer in photosynthetic reaction centers from Rhodobacter sphaeroides. Chem. Phys. Lett. 183 (1991) 471-477
53. Prince R.C., and Dutton P.L. Protonation and reducing potential of the primary electron acceptor. In: Clayton R.K., and Systrom W.R. (Eds). The Photosynthetic Bacteria (1978), Plenum Press, New York 439-453
54. Parson W. Electron transfer in reaction centers. In: Scheer H. (Ed). Chlorophylls (1991), CRC Press, Boca Raton, FL 1153-1180
55. Mathis P., Sinning I., and Michel H. Kinetics of electron transfer from the primary to the secondary quinone in Rhodopseudomonas viridis. Biochim. Biophys. Acta 1098 (1992) 151-158
56. Shuvalov V.A. Photosynthetic Primary Charge Separation of Light Energy (1990), Nauka, Moscow
57. Vos M.H., and van Gorkom H.J. Thermodynamics of electron transport in photosystem I studied by electric field-stimulated charge recombination. Biochim. Biophys. Acta 934 (1988) 293-302
58. Brettel K., and Vos M.H. Spectroscopic resolution of the picosecond reduction kinetics of the secondary electron acceptor A1 in photosystem I. FEBS Lett. 447 (1999) 315-317
59. Chamorovsky S.K., and Cammack R. Direct determination of the midpoint potential of the acceptor X in chloroplast Photosystem I by electrochemical reduction and ESR spectroscopy. Photobiochem. Photobiophys. 4 (1982) 195-200
60. Setif P., and Brettel K. Forward electron transfer from phylloquinone A1 to iron-sulfur centers in spinach photosystem I. Biochemistry 32 (1993) 7846-7854
61. Golbeck J.H. Photosystem I in cyanobacteria. In: Bryant D.A. (Ed). The Molecular Biology of Cyanobacteria (1994), Kluwer Acad. Publishers, The Netherlands 179-220
62. Brettel K., and Leibl W. Electron transfer in photosystem I. Biochim. Biophys. Acta 1507 (2001) 100-114
63. Metz J.G., Nixon P.J., Rögner M., Brudvig G.W., and Diner B.A. Directed alteration of the D1 polypeptide of photosystem II: evidence that tyrosine-161 is the redox component, Z, connecting the oxygen-evolving complex to the primary electron donor, P680. Biochemistry 28 (1989) 6960-6969
64. i of the water oxidizing system. FEBS Lett. 236 (1988) 425-431
65. 2 evolution and Chl aII+ (P680+) nanosecond reduction kinetics in single flashes as a function of pH. Biochim. Biophys. Acta 974 (1989) 36-43
66. Groot M.L., Pawlowicz N.P., van Wilderen L.J.G.W., Breton J., van Stokkum I.H.M., and van Grondelle R. Initial electron donor and acceptor in isolated Photosystem II reaction centers identified with femtosecond mid-IR spectroscopy. Proc. Natl. Acad. Sci. U. S. A. 102 (2005) 13087-13092
67. Moser C.C., Page C.C., and Dutton P.L. Tunneling in PSII. Photochem. Photobiol. Sci. 4 (2005) 933-939
68. Krieger A., Rutherford A.W., and Johnson G.N. On the determination of redox midpoint potential of the primary quinone electron acceptor, QA, in photosystem II. Biochim. Biophys. Acta 1229 (1995) 193-201
69. Bernarding J., Eckert H.-J., Eichler H.J., Napiwotzki A., and Renger G. Kinetic studies on the stabilization of the primary radical pair P680+ Pheo- in different photosystem II preparations from higher plants. Photochem. Photobiol. 59 (1994) 566-573
70. Kyritsis P., Huber G., Quinkal I., Gaillard J., and Moulis J.-M. Intramolecular electron transfer between [4Fe-4S] clusters studied by proton magnetic resonance spectroscopy. Biochemistry 36 (1997) 7839-7846