Drastic changes in the ligand structure of the oxygen-evolving Mn cluster upon Ca2+ depletion as revealed by FTIR difference spectroscopy

Biochimica et Biophysica Acta - Bioenergetics

Volumn 1767, Issue 6, 2007, Pages 535-540

  Taguchi, Yuta ^a   Noguchi, Takumi ^a  

^a UNIVERSITY OF TSUKUBA   (Japan)

Author keywords

Ca2+; Carboxylate ligand; FTIR; Mn cluster; Oxygen evolution; Photosystem II

Indexed keywords

CALCIUM ION; CARBOXYLIC ACID; EDETIC ACID; MANGANESE DERIVATIVE; POTASSIUM ION;

ARTICLE; BINDING SITE; CYANOBACTERIUM; FOURIER TRANSFORM INFRARED DIFERENCE SPECTROSCOPY; INFRARED SPECTROSCOPY; LIGAND BINDING; MOLECULAR INTERACTION; PHASE TRANSITION; PRIORITY JOURNAL; SPECTROSCOPY; THERMOSYNECHOCOCCUS ELONGATUS;

CALCIUM; LIGANDS; MANGANESE; OXYGEN; PHOTOSYSTEM II PROTEIN COMPLEX; SPECTROSCOPY, FOURIER TRANSFORM INFRARED;

EID: 34249794568     PISSN: 00052728     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbabio.2006.11.002     Document Type: Article

References (52)

1. Debus R.J. The manganese and calcium ions of photosynthetic oxygen evolution. Biochim. Biophys. Acta 1102 (1992) 269-352
2. Hillier W., and Messinger J. Mechanism of photosynthetic oxygen production. In: Wydrzynski T., and Satoh K. (Eds). Photosystem II: The Light-Driven Water:Plastoquinone Oxidoreductase (2005), Springer, Dordrecht, The Netherlands 567-608
3. Yachandra V.K. The catalytic manganese cluster: Organization of the metal ions. In: Wydrzynski T., and Satoh K. (Eds). Photosystem II: The Light-Driven Water:Plastoquinone Oxidoreductase (2005), Springer, Dordrecht, The Netherlands 235-260
4. Debus R.J. The catalytic manganese cluster: Protein ligation. In: Wydrzynski T., and Satoh K. (Eds). Photosystem II: The Light-Driven Water:Plastoquinone Oxidoreductase (2005), Springer, Dordrecht, The Netherlands 261-284
5. Åhrling K.A., Pace R.J., and Evans M.C.W. The catalytic manganese cluster: Implications from spectroscopy. In: Wydrzynski T., and Satoh K. (Eds). Photosystem II: The Light-Driven Water: Plastoquinone Oxidoreductase (2005), Springer, Dordrecht, The Netherlands 285-306
6. Yocum C.F. Calcium activation of photosynthetic water oxidation. Biochim. Biophys. Acta 1059 (1991) 1-15
7. van Gorkom H.J., and Yocum C.F. The calcium and chloride cofactors. In: Wydrzynski T., and Satoh K. (Eds). Photosystem II: The Light-Driven Water:Plastoquinone Oxidoreductase (2005), Springer, Dordrecht, The Netherlands 307-327
8. Ferreira K.N., Iverson T.M., Maghlaoui K., Barber J., and Iwata S. Architecture of the photosynthetic oxygen-evolving center. Science 19 (2004) 1831-1838
9. Loll B., Kern J., Saenger W., Zouni A., and Biesiadka J. Towards complete cofactor arrangement in the 3.0 Å resolution structure of photosystem II. Nature 438 (2005) 1040-1044
10. 4Ca complex in single crystals of photosystem II: A case study for metalloprotein crystallography. Proc. Natl. Acad. Sci. U. S. A. 102 (2005) 12047-12052
11. Grabolle M., Haumann M., Muller C., Liebisch P., and Dau H. Rapid loss of structural motifs in the manganese complex of oxygenic photosynthesis by X-ray irradiation at 10-300 K. J. Biol. Chem. 281 (2006) 4580-4588
12. 2 formation. Biochemistry 40 (2001) 7937-7945
13. 18O isotope exchange measurements reveal that calcium is involved in the binding of one substrate-water molecule to the oxygen-evolving complex in Photosystem II. Biochemistry 42 (2003) 6209-6217
14. Noguchi T., and Berthomieu C. Molecular analysis by vibrational spectroscopy. In: Wydrzynski T., and Satoh K. (Eds). Photosystem II: The Light-Driven Water:Plastoquinone Oxidoreductase (2005), Springer, Dordrecht, The Netherlands 367-387
15. Hillier W., and Babcock G.T. S-state dependent Fourier transform infrared difference spectra for the photosystem II oxygen evolving complex. Biochemistry 40 (2001) 1503-1509
16. Noguchi T., and Sugiura M. Flash-induced Fourier transform infrared detection of the structural changes during the S-state cycle of the oxygen-evolving complex in photosystem II. Biochemistry 40 (2001) 1497-1502
17. 2+ in the photosynthetic oxygen-evolving center by means of Fourier transform infrared spectroscopy. Biochim. Biophys. Acta 1228 (1995) 189-200
18. Noguchi T., Ono T., and Inoue Y. A carboxylate ligand interacting with water in the oxygen-evolving center of photosystem II as revealed by Fourier transform infrared spectroscopy. Biochim. Biophys. Acta 1232 (1995) 59-66
19. 13C isotope labeling. Biochemistry 42 (2003) 6035-6042
20. 2 transition: an isotope-edited FTIR study. Biochemistry 43 (2004) 3152-3166
21. 3 transitions in photosystem II. Biochemistry 44 (2005) 1367-1374
22. 3 transitions in photosystem II. Biochemistry 45 (2006) 8801-8811
23. Kimura Y., Mizusawa N., Yamanari T., Ishii A., and Ono T. Structural changes of D1 C-terminal α-carboxylate during S-state cycling in photosynthetic oxygen evolution. J. Biol. Chem. 280 (2005) 2078-2083
24. Kimura Y., Mizusawa N., Ishii A., Nakazawa S., and Ono T. Changes in structural and functional properties of oxygen-evolving complex induced by replacement of D1-glutamate 189 with glutamine in photosystem II-Ligation of glutamate 189 carboxylate to the manganese cluster. J. Biol. Chem. 280 (2005) 37895-37900
25. Noguchi T., Inoue Y., and Tang X.-S. Structure of a histidine ligand in the photosynthetic oxygen-evolving complex as studied by light-induced Fourier transform infrared difference spectroscopy. Biochemistry 38 (1999) 10187-10195
26. Kimura Y., Mizusawa N., Ishii A., and Ono T. FTIR detection of structural changes in a histidine ligand during S-state cycling of photosynthetic oxygen-evolving complex. Biochemistry 44 (2005) 16072-16078
27. Noguchi T., and Sugiura M. Structure of an active water molecule in the water-oxidizing complex of photosystem II as studied by FTIR spectroscopy. Biochemistry 39 (2000) 10943-10949
28. Noguchi T., and Sugiura M. FTIR detection of water reactions during the flash-induced S-state cycle of the photosynthetic water-oxidizing complex. Biochemistry 41 (2002) 15706-15712
29. Chu H.-A., Gardner M.T., O'Brien J.P., and Babcock G.T. Low-frequency Fourier transform infrared spectroscopy of the oxygen-evolving and quinone acceptor complexes in photosystem II. Biochemistry 38 (1999) 4533-4541
30. Chu H.-A., Sackett H., and Babcock G.T. Identification of a Mn-O-Mn cluster vibrational mode of the oxygen-evolving complex in photosystem II by low-frequency FTIR spectroscopy. Biochemistry 39 (2000) 14371-14376
31. Deacon G.B., and Phillips R.J. Relationships between the carbon-oxygen stretching frequencies of carboxylato complexes and the type of carboxylate coordination. Coord. Chem. Rev. 33 (1980) 227-250
32. Nakamoto K. Infrared and Raman Spectra of Inorganic and Coordination Compounds. 5th ed. (1997), John Wiley and Sons, New York 59-62 Part B
33. Nara M., Torii H., and Tasumi M. Correlation between the vibrational frequencies of the carboxylate group and the types of its coordination to a metal ion: an ab initio molecular orbital study. J. Phys. Chem. 100 (1996) 19812-19817
34. 1 FTIR spectrum in oxygen-evolving complex of photosystem II. Biochemistry 40 (2001) 14061-14068
35. 2+ depletion and metal cation substitution in the photosynthetic oxygen-evolving complex. Biochemistry 41 (2002) 5844-5853
36. 1 FTIR spectrum in photosynthetic oxygen-evolving complex. J. Inorg. Biochem. 97 (2003) 231-239
37. Kimura Y., Hasegawa K., Yamanari T., and Ono T. Studies on photosynthetic oxygen-evolving complex by means of Fourier transform infrared spectroscopy: calcium and chloride cofactors. Photosynth. Res. 84 (2005) 245-250
38. Strickler M.A., Walker L.M., Hillier W., and Debus R.J. Evidence from biosynthetically incorporated strontium and FTIR difference spectroscopy that the C-terminus of the D1 polypeptide of photosystem II does not ligate calcium. Biochemistry 44 (2005) 8571-8577
39. Barry B.A., Hicks C., De Riso A., and Jenson D.L. Calcium ligation in photosystem II under inhibiting conditions. Biophys. J. 89 (2005) 393-401
40. De Riso A., Jenson D.L., and Barry B.A. Calcium exchange and structural changes during the photosynthetic oxygen evolving cycle. Biophys. J. 91 (2006) 1999-2008
41. 2+ exchange in the S-state cycle of photosynthetic oxygen evolution as studied by flash-induced FTIR difference spectroscopy. Biochemistry 45 (2006) 13454-13464
42. Berthold D.A., Babcock G.T., and Yocum C.F. A highly resolved, oxygen-evolving photosystem II preparation from spinach thylakoid membranes. EPR and electron-transport properties. FEBS Lett. 134 (1981) 231-234
43. Ono T., and Inoue Y. Effects of removal and reconstitution of the extrinsic 33, 24 and 16 kDa proteins on flash oxygen yield in photosystem II particles. Biochim. Biophys. Acta 850 (1986) 380-389
44. Noguchi T., and Sugiura M. Flash-induced FTIR difference spectra of the water oxidizing complex in moderately hydrated photosystem II core films: effect of hydration extent on S-state transitions. Biochemistry 41 (2002) 2322-2330
45. 2 evolution in higher plant photosystem II by a simple low pH treatment. FEBS Lett. 227 (1988) 147-152
46. 2+-depleted photosystem II induced by binding of the 24-kilodalton extrinsic protein. Biochemistry 31 (1992) 7648-7655
47. 3 transition in photosynthetic oxygen evolution system. Biochim. Biophys. Acta 973 (1989) 443-449
48. 2 transition in the oxygen-evolving manganese cluster in photosystem II by light-induced Fourier transform infrared difference spectroscopy. Biochemistry 31 (1992) 5953-5956
49. A reduction in Photosystem II. Biochemistry 35 (1996) 15447-15460
50. A in cyanide and high-pH treated and iron-depleted PS II membrane fragments. Biochemistry 38 (1999) 4846-4852
51. 2-evolving complex. Biochemistry 41 (2002) 958-966
52. 2+. Biochemistry 34 (1995) 9021-9027