A novel 2D model of internal O2 dynamics and H2S intrusion in seagrasses

Ecological Modelling

Volumn 205, Issue 3-4, 2007, Pages 365-380

  Miller III, Harlan L ^a   Meile, Christof ^a   Burd, Adrian B ^a  

^a UNIVERSITY OF GEORGIA   (United States)

Author keywords

Biological sulfide oxidation; Hydrogen sulfide; Oxygen; Reaction transport models; Root aeration; Sulfide intrusion; Thalassia testudinum; Zostera marina

Indexed keywords

HYDROGEN; OXIDATION; PHOTOSYNTHESIS; PLANTS (BOTANY); SEDIMENTS; TISSUE; WATER;

BIOLOGICAL SULFIDE OXIDATION; REACTION-TRANSPORT MODELS; THALASSIA TESTUDINUM; ZOSTERA MARINA;

OXYGEN;

ADVECTION; DIFFUSION; DISSOLVED ORGANIC CARBON; EXUDATION; HYDROGEN SULFIDE; LABORATORY METHOD; MARINE SEDIMENT; OXIC CONDITIONS; OXIDATION; OXYGEN; SEAGRASS; SEAWATER; SENSITIVITY ANALYSIS; TWO-DIMENSIONAL MODELING; WATER COLUMN;

THALASSIA TESTUDINUM; ZOSTERA MARINA;

EID: 34249077963     PISSN: 03043800     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ecolmodel.2007.03.004     Document Type: Article

References (76)

1. Ackerman J.D., and Okubo A. Reduced mixing in a marine macrophyte canopy. Funct. Ecol. 7 (1993) 305-309
2. Almgren T., and Hagström I. The oxidation rate of sulphide in sea water. Water Res. 8 (1974) 395-400
3. Armstrong W. Aeration in higher plants. In: Woolhouse H.W. (Ed). Advances in Botanical Research vol. 7 (1979), Academic Press, London 225-332
4. Binzer T., and Middelboe A.L. From thallus to communities: scale effects and photosynthetic performance in macroalgae communities. Mar. Ecol. Prog. Ser. 287 (2005) 65-75
5. Blaabjerg V., Mouritsen K.N., and Finster K. Diel cycles of sulphate reduction rates in sediments of a Zostera marina bed (Denmark). Aquat. Microb. Ecol. 15 (1998) 97-102
6. Blackburn T.H., Nedwell D.B., and Wiebe W.J. Active mineral cycling in a Jamaican seagrass sediment. Mar. Ecol. Prog. Ser. 110 (1994) 233-239
7. Borum J., Pedersen O., Greve T.M., Frankovich T.A., Zieman J.C., Fourqurean J.W., and Madden C.J. The potential role of plant oxygen and sulphide dynamics in die-off events of the tropical seagrass, Thalassia testudinum. J. Ecol. 93 (2005) 148-158
8. Boudreau B.P. Diagenetic Models and Their Implementation: Modelling Transport and Reactions in Aquatic Sediments (1997), Springer, Berlin
9. Burd A.B., and Dunton K.H. Field verification of a light-driven model of biomass changes in the seagrass Halodule wrightii. Mar. Ecol. Prog. Ser. 209 (2001) 85-98
10. Caffrey J.M., and Kemp W.M. Seasonal and spatial patterns of oxygen production, repiration and root-rhizome release in Potamogeton perfoliatus L. and Zostera marina L. Aquat. Bot 40 (1991) 109-128
11. Carlson P.R., and Forrest Jr. J. Uptake of dissolved sulfide by Spartina alterniflora: evidence from natural sulfur isotope abundance ratios. Science 216 (1982) 633-635
12. Carlson P.R., Yarbro L.A., and Barber Jr. T.R. Relationship of sediment sulfide to mortality of Thalassia testudinum in Florida Bay. Bull. Mar. Sci. 54 (1994) 733-746
13. Carroll J.J., and Mather A.E. The solubility of hydrogen sulfide in water from 0 to 90 ° C and pressures to 1 MPa. Geochim. Cosmochim. Acta 53 (1989) 1163-1170
14. Carslaw H.S., and Jaeger J.C. Conduction of Heat in Solids. 2nd ed. (1986), Clarendon Press, Oxford
15. Chambers R.M., Fourqurean J.W., Macko S.A., and Hoppenot R. Biogeochemical effects of iron availablility on primary production in a shallow marine carbonate environment. Limnol. Oceanogr. 46 (2001) 1278-1286
16. 2. Environ. Sci. Technol. 6 (1972) 529-537
17. Cline J.D., and Richards R.A. Oxygenation of hydrogen sulfide in seawater at constant salinity, temperature, and pH. Environ. Sci. Technol. 3 (1969) 838-843
18. Colt, J., 1984. Computation of Dissolved Gas Concentrations in Water as a Function of Temperature, Salinity, and Pressure. American Fisheries Society Special Publication 14, Bethesda, Maryland.
19. Connell E.L., Colmer T.D., and Walker D.I. Radial oxygen loss from intact roots of Halophilia ovalis as a function of distance behind the root tip and shoot illumination. Aquat. Bot. 63 (1999) 219-228
20. Durako M.J., and Kunzelman J.I. Photosynthetic characteristics of Thalassia testudinum measured in situ by pulse-amplitude modulated (PAM) fluorometry: methodological and scale-based considerations. Aquat. Bot. 73 (2002) 173-185
21. Eldridge P.M., Kaldy J.E., and Burd A.B. Stress response model for the subtropical seagrass Thalassia testudinum: the interactions of light, temperature, sedimentation, and geochemistry. Estuaries 27 (2004) 923-937
22. Eldridge P.M., and Morse J.W. A diagenetic model for sediment-seagrass interactions. Mar. Chem. 70 (2000) 89-103
23. Enrìquez S., Marbá N., Duarte C.M., van Tussenbroek B.I., and Reyes-Zavala G. Effects of seagrass Thalassia testudinum on sediment redox. Mar. Ecol. Prog. Ser. 219 (2001) 149-158
24. Enrìquez S., and Pantoja-Reyes N.I. Form-function analysis of the effect of canopy morphology on leaf self-shading in the seagrass Thalassia testudinum. Oecologia 145 (2005) 235-243
25. Erskine J.M., and Koch M.S. Sulfide effects on Thalassia testudinum carbon balance and adenylate energy charge. Aquat. Bot. 67 (2000) 275-285
26. Fourqurean J.W., and Zieman J.C. Photosynthesis, respiration and whole plant carbon budget of the seagrass Thalassia testudinum. Mar. Ecol. Prog. Ser. 69 (1991) 161-170
27. Frederiksen M.S., and Glud R.N. Oxygen dynamics in the rhizosphere of Zostera marina: a two-dimensional planar optode study. Limnol. Oceanogr. 51 (2006) 1072-1083
28. Frederiksen M.S., Holmer M., Borum J., and Kennedy H. Temporal and spatial variation of sulfide invasion in eelgrass (Zostera marina) as reflected by its sulfur isotopic composition. Limnol. Oceanogr. 51 (2006) 2308-2318
29. Fry B., Scanlin R.S., Winters J.K., and Parker P.L. Sulphur uptake by salt grasses, mangroves, and seagrasses in anaerobic sediments. Geochim. Cosmochim. Acta 46 (1982) 1121-1124
30. Gallegos M.E., Merino M., Marbá N., and Duarte C.M. Biomass and dynamics of Thalassia testudinum in the Mexican Caribbean: elucidating rhizome growth. Mar. Ecol. Prog. Ser. 95 (1993) 185-192
31. Goodman J.L., Moore K.A., and Dennison W.C. Photosynthetic responses of eelgrass (Zostera marina L.) to light and sediment sulfide in a shallow barrier island lagoon. Aquat. Bot 50 (1995) 37-47
32. Greve T.M., Borum J., and Pedersen O. Meristematic oxygen variability in eelgrass (Zostera marina). Limnol. Oceanogr. 48 (2003) 210-216
33. Hall M.O., Durako M.J., Fourqurean J.W., and Zieman J.C. Decadal changes in seagrass distribution and abundance in Florida bay. Estuaries 22 (1999) 445-459
34. Hemminga M.A. The root/rhizome system of seagrasses: an asset and a burden. J. Sea Res. 39 (1998) 183-196
35. Holmer M., Andersen F.Ø., Nielsen S.L., and Boschker H.T.S. The importance of mineralization based on sulfate reduction for nutrient regeneration in tropical seagrass sediments. Aquat. Bot. 71 (2001) 1-17
36. Holmer M., and Bondgaard E.J. Photosynthetic and growth response of eelgrass to low oxygen and high sulfide concentrations during hypoxic events. Aquat. Bot. 70 (2001) 29-38
37. Iqbal M. An Introduction to Solar Radiation (1983), Academic Press, Toronto
38. Jensen S.I., Kühl M., Glud R.N., Jørgensen L.B., and Priemé A. Oxic microzones and radial oxygen loss from roots of Zostera marina. Mar. Ecol. Prog. Ser. 293 (2005) 49-58
39. Jones W.B., Cifuentes L.A., and Kaldy J.E. Stable carbon isotope evidence for coupling between sedimentary bacteria and seagrasses in a sub-tropical lagoon. Mar. Ecol. Prog. Ser. 255 (2003) 15-25
40. Jørgensen, B.B., Nelson, D.C., 2004. Sulfide oxidation in marine sediments: Geochemistry meets microbiology. In: Amend, J.P., Edwards, K.J., Lyons, T.W. (Eds.), Sulfur Biogeochemistry: Past and Present. Geological Society of America Special Paper 379, pp. 63-81.
41. 13C tracer experiments and modeling. Mar. Ecol. Prog. Ser. 317, 41-55
42. Kirk J.T.O. Light & Photosynthesis in Aquatic Ecosystems (1994), Cambridge University Press, Cambridge
43. Koch M.S., and Erskine J.M. Sulfide as a phytotoxin to the tropical seagrass Thalassia testudinum: interactions with light, salinity and temperature. J. Exp. Mar. Biol. Ecol. 266 (2001) 81-95
44. Ku T.C.W., Walter L.M., Coleman M.L., Blake R.E., and Martini A.M. Coupling between sulfur recycling and syndepositional carbonate dissolution: evidence from oxygen and sulfur isotope composition of pore water sulfate, South Florida Platform, USA. Geochim. Cosmochim. Acta 63 (1999) 2529-2546
45. Larkum A.W.D., Roberts G., Kuo J., and Strother S. Gaseous movement in seagrasses. In: Larkum A.W.D., McComb A.J., and Shepherd S.A. (Eds). Biology of Seagrasses (1989), Elsevier, Amsterdam 687-722
46. Marbá N., and Duarte C.M. Rhizome elongation and seagrass clonal growth. Mar. Ecol. Prog. Ser. 174 (1998) 269-280
47. Marsh J.A., Dennison W.C., and Alberte R.S. Effects of temperature on photosynthesis and respiration in eelgrass (Zostera marina). J. Exp. Mar. Biol. Ecol. 101 (1986) 257-267
48. Meile C., Berg P., Van Cappellen P., and Tuncay K. Solute-specific pore water irragation: implications for chemical cycling in early diagenesis. J. Mar. Res. 63 (2005) 601-621
49. Meysman F.J.R., Galaktionov O.S., and Middelburg J.J. Bio-irrigation in permeable sediments: An assessment of model complexity. J. Mar. Res. 64 (2006) 589-627
50. Millero F.J. The thermodynamics and kinetics of the hydrogen sulfide system in natural waters. Mar. Chem. 18 (1986) 121-147
51. 2S in seawater as a function of temperature, pH, and ionic strength. Environ. Sci. Technol. 21 (1987) 439-443
52. Millero F.J., and Poisson A. International one-atmosphere equation of state of seawater. Deep-Sea Res. 28 (1981) 625-629
53. Moriarty D.J.W., Iverson R.L., and Pollard P.C. Exudation of organic carbon by the seagrass Halodule wrightii Aschers. and its effect on bacterial growth in the sediment. J. Exp. Mar. Biol. Ecol. 96 (1986) 115-126
54. Nobel P.S. Physiochemical and Environmental Plant Physiology (1999), Academic Press, San Diego
55. Olson A.T., and Shelstad K.A. Introduction to Fluid Flow and the Transfer of Heat and Mass (1987), Prentice-Hall, Inc., Englewood Cliffs, New Jersey
56. Pedersen O., Binzer T., and Borum J. Sulphide intrusion in eelgrass (Zostera marina L.). Plant Cell Environ. 27 (2004) 1-8
57. Pedersen O., Borum J., Duarte C.M., and Fortes M.D. Oxygen dynamics in the rhizosphere of Cymodocea rotundata. Mar. Ecol. Prog. Ser. 169 (1998) 283-288
58. Press W.H., Teukolsky S.A., Vettering W.T., and Flannery B.P. Numerical Recipes in C: the art of scientific computing. 2nd ed. (1992), Cambridge University Press, Cambridge
59. Rasmussen, K., 1997. Calculation methods for the physical properties of air used in the calibration of microphones. Tech. Rep., Technical University of Denmark.
60. Raven J.A., and Scrimgeour C.M. The influence of anoxia on plants of saline habitates with special reference to the sulfur cycle. Ann. Bot. 79 (1997) 79-86
61. Roberts D.G., and McComb A.J. The structure and continuity of the lacunar system of the seagrass Halophila ovalis (R. Br.) Hook F. Hydrocharitaceae. Aquat. Bot. 18 (1984) 377-388
62. Sand-Jensen K., Pedersen O., Binzer T., and Borum J. Contrasting oxygen dynamics in the freshwater isoetid Lobelia dortmanna and the marine seagrass Zostera marina. Ann. Bot. 96 (2005) 613-623
63. Sand-Jensen K., Prahl C., and Stokholm H. Oxygen release from roots of submerged aquatic macrophytes. Oikos 38 (1982) 349-354
64. Smith R.D., Dennison W.C., and Alberte R.S. Role of seagrass photosynthesis in root aerobic processes. Plant Physiol. 74 (1984) 1055-1058
65. Smith R.D., Pregnall A.M., and Alberte R.S. Effects of anaerobiosis on root metabolism of Zostera marina (eelgrass): implications for survival in reducing sediments. Mar. Biol. 98 (1988) 131-141
66. Somero G.N., Childress J.J., and Anderson A.E. Transport, metabolism, and detoxification of hydrogen sulfide in animals from sulfide-rich marine environments. Rev. Aquat. Sci. 1 (1989) 591-614
67. Sorrell B.K., and Dromgoole F.I. Oxygen transport in the submerged freshwater macrophyte Egeria densa Planch. I. Oxygen production, storage and release. Aquat. Bot. 28 (1987) 63-80
68. Sorrell B.K., and Dromgoole F.I. Oxygen transport in the submerged freshwater macrophyte Egeria densa Planch. II. Role of lacunar gas pressures. Aquat. Bot. 31 (1988) 93-106
69. Terrados J., Duarte C.M., Kamp-Nielsen L., Aqawin N.S.R., Gacia E., Lacap D., Fortes M.D., Borum J., Lubanski M., and Greve T. Are seagrass growth and survival constrained by the reducing conditions of the sediment. Aquat. Bot. 65 (1999) 175-197
70. Thamdrup B., Fossing H., and Jørgensen B.B. Manganese, iron, and sulfur cycling in coastal marine sediment, Aarhus Bay, Denmark. Geochim. Cosmochim. Acta 58 (1994) 5115-5129
71. Tomlinson P.B. On the morphology and anatomy of turtle grass, Thalassia testudinum (Hydrocharitaceae). VI. Leaf anatomy and development. Bull. Mar. Sci. 22 (1972) 75-93
72. Tomlinson P.B., and Vargo G.A. On the morphology and anatomy of turtle grass, Thalassia testudinum (Hydrocharitaceae). I. Vegetative morphology. Bull. Mar. Sci. 16 (1966) 748-761
73. Vrugt J.A., Wijk M.T., Hopmans J.W., and Šimunek J. One-, two-, and three-dimensional root water uptake functions for transient modeling. Water Resour. Res. 37 (2001) 2457-2470
74. Wang Y., and Van Cappellen P. A multicomponent reactive transport model of early diagenesis: application to redox cycling in coastal marine sediments. Geochim. Cosmochim. Acta 60 (1996) 2992-3014
75. Ziegler S., and Benner R. Dissolved organic carbon cycling in a subtropical seagrass-dominated lagoon. Mar. Ecol. Prog. Ser. 180 (1999) 149-160
76. Zieman J.C., Fourqurean J.W., and Frankovich T.A. Seagrass die-off in Florida Bay: long-term trends in abundance and growth of turtle grass Thalassia testudinum. Estuaries 22 (1999) 460-470