Distribution of CCR2 polymorphism in HIV-1-infected and healthy subjects in North India

International Journal of Immunogenetics

Volumn 34, Issue 3, 2007, Pages 153-156

  Kaur, G ^a   Singh, P ^a   Kumar, N ^a   Rapthap, C C ^a   Sharma, G ^a   Vajpayee, M ^a   Wig, N ^a   Sharma, S K ^a   Mehra, N K ^a  

^a ALL INDIA INSTITUTE OF MEDICAL SCIENCES   (India)

Author keywords

[No Author keywords available]

Indexed keywords

CHEMOKINE RECEPTOR CCR2;

ADULT; AGED; ARTICLE; CD4+ T LYMPHOCYTE; CD8+ T LYMPHOCYTE; CONTROLLED STUDY; GENE FREQUENCY; GENETIC ASSOCIATION; GENETIC POLYMORPHISM; GENETIC SUSCEPTIBILITY; GENOTYPE; HUMAN; HUMAN IMMUNODEFICIENCY VIRUS INFECTION; INDIA; MAJOR CLINICAL STUDY; PRIORITY JOURNAL;

ADOLESCENT; ADULT; AGED; CASE-CONTROL STUDIES; CHILD; CHILD, PRESCHOOL; CROSS-SECTIONAL STUDIES; GENE FREQUENCY; GENOTYPE; HIV INFECTIONS; HIV-1; HUMANS; INDIA; MIDDLE AGED; POLYMORPHISM, GENETIC; RECEPTORS, CHEMOKINE;

HUMAN IMMUNODEFICIENCY VIRUS 1;

EID: 34248584595     PISSN: 17443121     EISSN: 1744313X     Source Type: Journal    
DOI: 10.1111/j.1744-313X.2007.00667.x     Document Type: Article

References (36)

1. Anzala, A.O., Ball, T.B., Rostron, T., O'Brien, S.J., Plummer, F.A. Rowland-Jones, S.L. (1998) CCR2-64I allele and genotype association with delayed AIDS progression in African women. Lancet, 351, 1632.
2. Arenzana-Seisdedos, F. Parmentier, M. (2006) Genetics of resistance to HIV infection: Role of co-receptors and co-receptor ligands. Seminars in Immunology, 18, 387.
3. Carrington, M., Dean, M., Martin, M.P. O'Brien, S.J. (1999) Genetics of HIV-1 infection: chemokine receptor CCR5 polymorphism and its consequences. Human Molecular Genetics, 8, 1939.
4. Carrington, M., Nelson, G. O'Brien, S.J. (2001) Considering genetic profiles in functional studies of immune responsiveness to HIV-1. Immunology Letters, 79, 131.
5. Centers for Disease Control and Prevention (CDC) (1993) Revised classification system for HIV infection and expanded surveillance case definition for AIDS among adolescents and adults. Morbid. Mortal. Weekly Rep., 41, 961.
6. Christine, M., Hogan, M.D. Hammer, S.M. (2001) Host determinants in HIV infection and disease. Annals of Internal Medicine, 134, 978.
7. Clark, V.J., Metheny, N., Dean, M, Peterson, R.J. (2001) Statistical estimation and pedigree analysis of CCR2-CCR5 haplotypes. Human Genetics, 108, 484.
8. Dean, M., Carrington, M. O'Brien, S.J. (2002) Balanced polymorphism selected by genetic versus infectious human disease. Annual Review of Genomics and Human Genetics, 3, 263.
9. Easterbrook, P.J., Rostron, T., Ives, N. et al. (1999) Chemokine receptor polymorphism and human immunodeficiency virus disease progression. The Journal of Infectious Diseases, 180, 1096.
10. Fang, G., Kuiken, C., Weiser, B., Rowland-Jones, S., Plummer, F., Chen, C.H. et al. (2004) Long-term survivors in Nairobi: complete HIV-1 RNA sequences and immunogenetic associations. Journal of Infectious Diseases, 190, 697.
11. Gonzalez, E., Bamshad, M., Sato, N., Mummidi, S., Dhanda, R., Catano, G. et al. (1999) Race-specific HIV-1 disease-modifying effects associated with CCR5 haplotypes. Proceedings of the National Academy of Sciences of the USA, 96, 12004.
12. Hladik, F., Liu, H., Speelmon, E., Livingston-Rosanoff, D., Wilson, S., Sakchalathorn, P., Hwangbo, Y., Greene, B., Zhu, T. McElrath, M.J. (2005) Combined effect of CCRD32 heterozygosity and the CCR5 promoter polymorphism A/G on CCR5 expression and resistance to human immunodeficiency virus type 1 transmission. Journal of Virology, 79, 11677.
13. Ioannidis, J.P., Rosenberg, P.S., Goedert, J.J., Ashton, L.J., Benfield, T.L., Buchbinder, S.P. et al. (2001) International Meta-Analysis of HIV Host Genetics: Effects of CCR5-Delta32, CCR2I, and SDF-1 3′A Alleles on HIV-1 disease progression: an international meta-analysis of individual-patient data. Annals of Internal Medicine, 135, 782.
14. Kaslow, R.A., Dorak, T. Tang, J.J. (2005) Influence of host genetic variation on susceptibility to HIV type 1 infection. Journal of Infectious Diseases, 191 (Suppl. 1 S68.
15. Kaur, G., Rapthap, C.C., Kumar, N., Kumar, S., Neolia, S. Mehra, N.K. (2007) Frequency distribution of cytokine gene polymorphisms in the healthy North Indian population. Tissue Antigens, 69, 113.
16. Kostrikis, L.G., Huang, Y., Moore, J.P., Wolinsky, S.M., Zhang, L., Guo, Y., Deutsch, L., Phair, J., Neumann, A.U. Ho, D.D. (1998) A chemokine receptor CCR2 allele delays HIV-1 disease progression and is associated with a CCR5 promoter mutation. Nature Medicine, 4, 350.
17. Libert, F., Vassart, G. Parmentier, M. (1999) The genetics of HIV coreceptors and coreceptor ligands. AIDS Review, 1, 221.
18. Louisirirotchanakul, S., Liu, H., Roongpisuthipong, A., Nakayama, E.E., Takebe, Y., Shioda, T. et al. (2002) Genetic analysis of HIV-1 discordant couples in Thailand: association of CCR2 64I homozygosity with HIV-1 negative status. Journal of Acquired Immune Deficiency Syndromes, 29, 314.
19. Martin, M.P., Dean, M., Smith, M.W., Winkler, C., Gerrard, B., Michael, N.L. et al. (1998) Genetic acceleration of AIDS progression by a promoter variant of CCR5. Science, 282, 1907.
20. McDermott, D.H., Zimmerman, P.A., Guignard, F., Kleeberger, C.A., Leitman, S.F. Murphy, P.M. (1998) CCR5 promoter polymorphism and HIV-1 disease progression. Multicenter AIDS Cohort Study (MACS). Lancet, 352, 866.
21. McNicholl, J.M., Lal, R.B. Kaslow, R. (2003) Human immunodeficiency virus (HIV) infection: Genetics. In: Encyclopedia of the human genome. Macmillan Publishers Ltd, Nature Publishing Group. http://www.ehgonline.net.
22. Mehendale, S.M., Bollinger, R.C., Kulkarni, S.S., Stallings, R.Y., Brookmeyer, R.S., Kulkarni, S.V. et al. (2002) Rapid disease progression in human immunodeficiency virus type 1-infected seroconverters in India. AIDS Research and Human Retroviruses, 18, 1175.
23. Mellado, M., Rodriguez-Frade, J.M., Vila-Coro, A.J., de Ana, A.M. Martinez, A.C. (1999) Chemokine control of HIV-1 infection. Nature, 400, 723.
24. Mulherin, S.A., O'Brien, T.R., Ioannidis, J.P., Goedert, J.J., Buchbinder, S.P., Coutinho, R.A. et al. (2003) Effects of CCR5 delta 32 and CCR2 64I alleles on HIV-1 disease progression: the protection varies with duration of infection. AIDS, 17, 377.
25. Nakayama, E.E., Tanaka, Y., Nagai, Y., Iwamoto, A. Shioda, T. (2004) A CCR2 V64I polymorphism affects stability of CCR2A isoform. AIDS, 18, 729.
26. O'Brien, S.J. Nelson, G.W. (2004) Human genes that limit AIDS. Nat Genetics, 36, 565.
27. O'Brien, S.J., Nelson, G.W., Winkler, C.A. et al. (2000) Polygenic and multifactorial disease gene association in man: lessons from AIDS. Annual Review of Genetics, 34, 563.
28. Ramana, G.V., Vasanthi, A., Khaja, M., Su, B., Govindaiah, V., Jin, L., Singh, L. Chakraborty, R. (2001) Distribution of HIV-1 resistance conferring polymorphic alleles SDF-1′A, CCR2I and CCR5 D32 in diverse populations of Andhra Pradesh, South India. Journal of Genetics, 80, 137.
29. Salkowitz, J.R., Bruse, S.E., Meyerson, H., Valdez, H., Mosier, D.E., Harding, C.V., Zimmerman, P.A. Lederman, M.M. (2003) CCR5 promoter polymorphism determines macrophage CCR5 density and magnitude of HIV-1 propagation in vitro. Clinical Immunology, 108, 234.
30. Samson, M., Soularue, P., Vassart, G. Parmentier, M. (1996) The genes encoding the human CC-chemokine receptors CC-KR1 to CC-CKR5 (CMKBR1-CMKBR5) are clustered in the p21.3-p24 region of chromosome 3. Genomics, 36, 522.
31. Shrestha, S., Strathdee, S.A., Galai, N., Oleksyk, T., Fallin, M.D., Mehta, S., Schaid, D., Vlahov, D., O'Brien, S.J. Smith, M.W. (2006) Behavioral risk exposure and host genetics of susceptibility to HIV-1 infection. Journal of Infectious Diseases, 193, 16.
32. Smith, M.W., Dean, M., Carrington, M., Winkler, C., Huttley, G.A., Lomb, D.A. et al. (1997) Contrasting genetic influence of CCR2 and CCR5 variants on HIV-1 infection and disease progression. Hemophilia Growth and Development Study (HGDS), Multicenter AIDS Cohort Study (MACS), Multicenter Hemophilia Cohort Study (MHCS), San Francisco City Cohort (SFCC), ALIVE Study. Science, 277, 959.
33. Suresh, P., Wanchu, A., Sachdeva, R.K. Bhatnagar, A. (2006) Gene polymorphisms in CCR5, CCR2, CXCR1, SDF-1 and RANTES in exposed but uninfected partners of HIV-1 infected individuals in North India. Journal of Clinical Immunology, 26 (5 476.
34. Tang, J., Rivers, C., Karita, E., Costello, C., Allen, S., Fultz, P.N., Schoenbaum, E.E. Kaslow, R.A. (1999) Allelic variants of beta-chemokine receptor 5 (CCR5) promoter: evolutionary relationships and predictable associations with HIV-1 disease progression. Genes and Immunity, 1, 20.
35. Vajpayee, M., Kaushik, S., Sreenivas, V., Wig, N. Seth, P. (2005) CDC staging based on absolute CD4 count and CD4 percentage in an HIV-1 infected Indian population: treatment implications. Clinical and Experimental Immunology, 141, 485.
36. Zhang, X.L., Zhang, C.Y., Yu, Y., Chen, F., Li, P. Fu, S.B. (2006) CCR2 allele polymorphisms in 15 Chinese ethnic populations. International Journal of Immunogenetics, 33, 45.