Statistical analysis of biological rhythm data

Methods in Molecular Biology

Volumn 362, Issue , 2007, Pages 29-45

  Dowse, Harold B ^a  

^a NONE

Author keywords

Autocorrelation; Biological rhythms; Circadian; Maximum entropy spectral analysis; MESA; Noise; Rhythmicity index; RI; Spectral analysis; Trend; Ultradian

Indexed keywords

ANIMAL; CIRCADIAN RHYTHM; COMPUTER PROGRAM; DROSOPHILA MELANOGASTER; GENETICS; PERIODICITY; PHYSIOLOGY; REVIEW; SIGNAL PROCESSING; STATISTICAL ANALYSIS;

ACTIVITY CYCLES; ANIMALS; CIRCADIAN RHYTHM; DATA INTERPRETATION, STATISTICAL; DROSOPHILA MELANOGASTER; PERIODICITY; SIGNAL PROCESSING, COMPUTER-ASSISTED; SOFTWARE;

EID: 34248577611     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1385/1-59745-257-2:29     Document Type: Article

References (18)

1. Dowse, H. B., and Ringo, J. M. (1989) The search for hidden periodicities in biological time series revisited. J. Theoret. Biol. 139, 487-515.
2. Dowse, H. B., and Ringo, J. M. (1991) Comparisons between "periodograms" and spectral analysis: apples are apples after all. J. Theoret. Biol. 148, 139-144.
3. Burg, J. P. (1978) Maximum entropy spectral analysis. In: Modern Spectrum Analysis (Childers, D.G., ed.), Wiley, New York.
4. Burg, J. P. (1978) A new analysis technique for time series data. In: Modern Spectrum Analysis (Childers, D.G., ed.), Wiley, New York,
5. Ulrych, T., and Bishop, T. (1975) Maximum entropy spectral analysis and autoregressive decomposition. Rev. Geophys. Space Physics 13, 183-300.
6. Abies, J. G. (1974) Maxiumum entropy spectral analysis. Astron. Astrophys. Suppl. Series 15, 383-393.
7. Chatfield, C. (1989) The Analysis of Time Series: An Introduction. Chapman and Hall, London.
8. Levine, J., Funes, P., Dowse, H., and Hall, J. (2002) Signal analysis of behavioral and molecular cycles. Biomed. Central. Neurosci. 3, 1.
9. Dowse, H. B., Ringo, J. M., Power, J., Johnson, E., Kinney, K., and White, L. (1995) A congenital heart defect in Drosophila caused by an action potential mutation. J. Neurogenet. 10, 153-168.
10. Johnson, E., Ringo, J., and Dowse, H. (1997) Modulation of Drosophila heartbeat by neurotransmitters. J. Comp. Physiol. B. 167, 89-97.
11. Johnson, E., Ringo, J., Bray, N., and Dowse, H. (1998) Genetic and pharmacological identification of ion channels central to Drosophila's cardiac pacemaker. J. Neurogenen 12, 1-24.
12. Krishnan, B., Levine, J., Sisson, K., et al. (2001) A new role for cryptochrome in a Drosophila circadian oscillator. Nature 411, 313-317.
13. Levine, J., Funes, P., Dowse, H., and Hall, J. (2002) Advanced analysis of a cryptochrome mutations's effects on the robustness and phase of molecular cycles in isolated peripheral tissues of Drosophila. Biomed. Central Neurosci. 3, 5.
14. Lindsley, G., Dowse, H., Burgoon, P., Kilka, M., and Stephenson, L. (1999) A persistent circhoral ultradian rhythm is identified in human core temperature. Chronobiology Intl. 16, 69-78.
15. Dowse, H. B., and Ringo, J. M. (1994) Summing locomotor activity into "bins": How to avoid artifact in spectral analysis. Biol. Rhythm Res. 25, 2-14.
16. Hamming, R. W. (1983) Digital Filters. Prentice-Hall, London.
17. Dowse, H. B., Hall, J. C.,and Ringo, J. M. (1987) Circadian and ultradian rhythms in period mutants of Drosophila melanogaster. Behav. Genet. 17, 19-35.
18. Dowse,H. B., Dushay, M. S., Hall, J. C., and Ringo, J. M. (1989) High resolution analysis of locomotor activity rhythms in disconnected, a visual system mutant of Drosophila melanogaster. Behav. Genet. 19, 529-542.