Ignicoccus hospitalis sp. nov., the host of Nanoarchaeum equitans

International Journal of Systematic and Evolutionary Microbiology

Volumn 57, Issue 4, 2007, Pages 803-808

  Paper, Walter ^a   Jahn, Ulrike ^a   Hohn, Michael J ^a   Kronner, Michaela ^a   Näther, Daniela J ^a   Burghardt, Tillmann ^a   Rachel, Reinhard ^a   Stetter, Karl O ^a   Huber, Harald ^a  

^a UNIVERSITY OF REGENSBURG   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN;

ARTICLE; BACTERIAL CELL WALL; BACTERIAL STRAIN; BACTERIUM CULTURE; BACTERIUM IDENTIFICATION; CHEMOLITHOAUTOTROPH; CONTROLLED STUDY; DESULFUROCOCCACEAE; FATTY ACID ANALYSIS; HYDROTHERMAL VENT SPECIES; HYPERTHERMOPHILIC BACTERIUM; ICELAND; IGNICOCCUS HOSPITALIS; IGNICOCCUS ISLANDICUS; IGNICOCCUS PACIFICUS; LIPID COMPOSITION; MICROBIAL MORPHOLOGY; MOLECULAR PHYLOGENY; NANOARCHAEOTA; NANOARCHAEUM EQUITANS; NEW SPECIES; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN ANALYSIS; RNA SEQUENCE; STRAIN DIFFERENCE;

BASE COMPOSITION; CHEMOAUTOTROPHIC GROWTH; DESULFUROCOCCACEAE; ICELAND; MEMBRANE PROTEINS; MOLECULAR SEQUENCE DATA; NANOARCHAEOTA; PHYLOGENY;

IGNICOCCUS; IGNICOCCUS ISLANDICUS; IGNICOCCUS PACIFICUS; NANOARCHAEOTA; NANOARCHAEUM EQUITANS;

EID: 34248174940     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.64721-0     Document Type: Article

References (29)

1. Balch, W. E. & Wolfe, R. S. (1976). New approach to the cultivation of methanogenic bacteria: 2-mercaptoethanesulfonic acid (HS-CoM)-dependent growth of Methanobacterium ruminantium in a pressurized atmosphere. Appl Environ Microbiol 32, 781-791.
2. Brosius, J., Dull, T. J., Sleeter, D. D. & Noller, H. F. (1981 . Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli. J Mol Biol 148, 107-127.
3. Burggraf, S., Huber, H. & Stetter, K. O. (1997). Reclassification of the crenarchaeal orders and families in accordance with 16S rRNA sequence data. Int J Syst Bacteriol 47, 657-660.
4. Burghardt, T., Näther, D. J., Junglas, B., Huber, H. & Rachel, R. (2007). The dominating outer membrane protein of the hyperthermophilic Archaeum Ignicoccus hospitalis: A novel pore-forming complex. Mol Microbiol 63, 166-176.
5. Eder, W., Ludwig, W. & Huber, R. (1999). Novel 16S rRNA gene sequences retrieved from highly saline brine sediments of Kebrit Deep, Red Sea. Arch Microbiol 172, 213-218.
6. Fricke, H., Giere, O., Stetter, K., Alfredsson, G. A., Kristjansson, J. K., Stoffers, P. & Svavarsson, J. (1989). Hydrothermal vent communities at the shallow subpolar Mid-Atlantic ridge. Mar Biol 102, 425-429.
7. Huber, H. (2005). Crenarchaeota. In Encyclopedia of Life Sciences. Chichester: Wiley. http://www.els.net
8. Huber, H. & Stetter, K. O. (2001). Order II. Desulfurococcales ord. nov. In Bergey's Manual of Systematic Bacteriology, 2nd edn, vol. 1, pp. 179-180. Edited by D. R. Boone, R. W. Castenholz & G. M. Garrity. New York: Springer.
9. Huber, R., Burggraf, S., Mayer, T., Barns, S., Rossnagel, P. & Stetter, K. O. (1995). Isolation of a hyperthermophilic archaeum predicted by in situ RNA analysis. Nature 376, 57-58.
10. Huber, H., Burggraf, S., Mayer, T., Wyschkony, I., Rachel, R. & Stetter, K. O. (2000). Ignicoccus gen. nov., a novel genus of hyperthermophilic, chemolithoautotrophic Archaea, represented by two new species, Ignicoccus islandicus sp. nov. and Ignicoccus pacificus sp. nov. Int J Syst Evol Microbiol 50, 2093-2100.
11. Huber, H., Hohn, M. J., Rachel, R., Fuchs, T., Wimmer, V. C. & Stetter, K. O. (2002). A new phylum of Archaea represented by a nanosized hyperthermophilic symbiont. Nature 417, 63-67.
12. Huber, H., Hohn, M. J., Rachel, R. & Stetter, K. O. (2006). Nanoarchaeota. In The Prokaryotes: A Handbook on the Biology of Bacteria, 3rd edn, vol. 3, Archaea. Bacteria: Firmicutes, Actinomycetes, pp. 274-280. Edited by M. Dworkin, S. Falkow, E. Rosenberg, K. H. Schleifer & E. Stackebrandt. New York: Springer.
13. Jahn, U., Summons, R., Sturt, H., Grosjean, E. & Huber, H. (2004 . Composition of the lipids of Nanoarchaeum equitans and their origin from its host Ignicoccus sp. strain KIN4/I. Arch Microbiol 182, 404-413.
14. Könneke, M., Bernhard, A. E., de la Torre, J. R., Walker, C. B., Waterbury, J. B. & Stahl, D. A. (2005). Isolation of an autotrophic ammonia-oxidizing marine archaeon. Nature 437, 543-546.
15. Lane, D. J. (1991). 16S/23S rRNA sequencing. In Nucleic Acid Techniques in Bacterial Systematics, pp. 115-175. Edited by E. Stackebrandt & M. Goodfellow. Chichester: Wiley.
16. Ludwig, W., Strunk, O., Westram, R., Richter, L., Meier, H., Yadhukumar, Buchner, A., Lai, T., Steppi, S., Jobb, G. & other authors (2004). ARB: A software environment for sequence data. Nucleic Acids Res 32, 1363-1371.
17. Marmur, J. & Doty, P. (1962). Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J Mol Biol 5, 109-118.
18. Näther, D. J. (2003). Elektronenmikroskopische und biochemische Untersuchungen an der äußeren Membran von Ignicoccus sp. Diploma thesis, Institute for Microbiology, University of Regensburg, Germany (in German).
19. Näther, D. J. & Rachel, R. (2004). The outer membrane of the hyperthermophilic archaeon Ignicoccus: Dynamics, ultrastructure and composition. Biochem Soc Trans 32, 199-203.
20. Pley, U., Schipka, J., Gambacorta, A., Jannasch, H. W., Fricke, H., Rachel, R. & Stetter, K. O. (1991). Pyrodictium abyssi sp. nov. represents a novel heterotrophic marine archaeal hyperthermophile growing at 110 °C. Syst Appl Microbiol 14, 245-253.
21. Rachel, R., Wyschkony, I., Riehl, S. & Huber, H. (2002). The ultrastructure of Ignicoccus: Evidence for a novel outer membrane and for intracellular vesicle budding in an archaeon. Archaea 1 9-18.
22. Rieger, G., Müller, K., Hermann, R., Stetter, K. O. & Rachel, R. (1997). Cultivation of hyperthermophilic archaea in cellulose capillaries resulting in improved preservation of fine structure. Arch Microbiol 168, 373-379.
23. Schägger, H. & von Jagow, C. (1987). Tricine-SDS- PAGE for the separation of proteins in the range from 1 to 100 kDa. Anal Biochem 166, 223-231.
24. Stetter, K. O. (1989). Extremely thermophilic chemolithoamotrophic archaebacteria. In Autotrophic Bacteria, pp. 167-176. Edited by H. G. Schlegel & B. Bowien. Berlin: Springer.
25. Stetter, K. O. (1992). Life at the upper temperature border. In Frontiers of Life, pp. 195-219. Edited by J. Trân Than Vân, K. Trân Than Vân, J. C. Mounolou, J. Schneider & C. McKay. Gif-sur-Yvette: Editions Frontières.
26. Stetter, K. O., König, H. & Stackebrandt, E. (1983). Pyrodictium gen. nov., a new genus of submarine disc-shaped sulphur reducing archaebacteria growing optimally at 105 °C. Syst Appl Microbiol 4, 535-551.
27. Völkl, P., Huber, R., Drobner, E., Rachel, R., Burggraf, S., Trincone, A. & Stetter, K. O. (1993). Pyrobaculum aerophilum sp. nov., a novel nitrate-reducing hyperthermophilic archaeum. Appl Environ Microbiol 59, 2918-2926.
28. Waters, E., Hohn, M. J., Ahel, I., Graham, D. E., Adams, M. D., Barnstead, M., Beeson, K. Y., Bibbs, L., Bolanos, R. & other authors (2003). The genome of Nanoarchaeum equitans: Insights into early archaeal evolution and derived parasitism. Proc Natl Acad Sci U S A 100, 12984-12988.
29. Wildgruber, G., Thomm, M., König, H., Ober, K., Ricchiuto, T. & Stetter, K. O. (1982). Methanoplanus limicola, a plate-shaped methanogen representing a novel family, the Methanoplanaceae. Arch Microbiol 132, 31-36.