Halophilic and halotolerant bacteria from river waters and shallow groundwater along the rouge river of Southeastern Michigan

Environmental Technology

Volumn 28, Issue 3, 2007, Pages 297-307

  Tiquia, S M ^a   Davis, D ^a   Hadid, H ^a   Kasparian, S ^a   Ismail, M ^a   Sahly, R ^a   Shim, J ^a   Singh, S ^a   Murray, K S ^a  

^a UNIVERSITY OF MICHIGAN DEARBORN   (United States)

Author keywords

16S rDNA; Enzymes; Halobacillus; Halomonas; Halophiles

Indexed keywords

AMINO ACIDS; BACTERIA; BACTERIOLOGY; ENZYMES; GROUNDWATER; RNA; SODIUM CHLORIDE; SURVEYS;

16S RDNA; BACTERIAL POPULATION; COMPOSITION CHANGES; HALOBACILLUS; HALOMONAS; HALOPHILES; HALOTOLERANT BACTERIA; SHALLOW GROUNDWATER;

RIVERS;

ACETOIN; ARGININE DEIMINASE; BACTERIAL DNA; BACTERIAL ENZYME; BACTERIAL RNA; BETA GALACTOSIDASE; CITRIC ACID; DNA 16S; GELATINASE; GROUND WATER; INDOLE; RIBOSOME DNA; RIBOSOME RNA; RIVER WATER; TRYPTOPHAN DEAMINASE; UNCLASSIFIED DRUG;

BACTERIA; DNA SEQUENCES; FERMENTATION; GROUNDWATER; NATURAL WATER GEOCHEMISTRY; RIVERS; SALTS; WATER POLLUTION;

DNA; GROUNDWATER; MICROBIAL ACTIVITY; MICROBIAL COMMUNITY; MORPHOLOGY; RIVER WATER; SALINITY; SALINITY TOLERANCE; WATER QUALITY;

ARTICLE; BACILLUS; BACTERIUM ISOLATE; BIODEGRADATION; BIOREMEDIATION; CLOSTRIDIUM; CONTROLLED STUDY; DNA SEQUENCE; ENVIRONMENTAL ENRICHMENT; ENZYME ANALYSIS; FERMENTATION TECHNIQUE; HALOBACILLUS; HALOBACTERIUM; HALOMONAS; HALOPHILIC BACTERIUM; NONHUMAN; NUCLEOTIDE SEQUENCE; PAENABACILLUS; SALT TOLERANCE; SEQUENCE ANALYSIS; SPECIES DIFFERENCE; STAPHYLOCOCCUS; UNITED STATES; WASTE WATER MANAGEMENT; WATER ANALYSIS; WATER QUALITY; WATER SAMPLING;

MICHIGAN; NORTH AMERICA; ROUGE RIVER; UNITED STATES;

BACILLUS (BACTERIUM); BACTERIA (MICROORGANISMS); CLOSTRIDIUM; HALOBACILLUS; HALOMONAS; STAPHYLOCOCCUS;

EID: 34247863717     PISSN: 09593330     EISSN: None     Source Type: Journal    
DOI: 10.1080/09593332808618789     Document Type: Article

References (31)

1. Toler, L.G., and Pollock, S.J. Retention of chloride in the unsaturated zone. J. Res. U.S. Geol Survey. 2, 119-123 (1974).
2. Eisen, C., and Anderson, M.P. The effects of urbanization on groundwater quality. In: Aquifer Contamination and Protection. R.E. Jackson (ed). UNESCO Press, Paris, SRH No. Milwauke, WI. pp. 378-390 (1980).
3. Ministry of the Environment. Ontario Drinking Water Objectives. Ontario Ministry of Environment. Toronto, ON. (1984).
4. Tiquia, S.M. Bacterial populations in river waters and shallow groundwater systems. Abstract presented at The joint International Symposia for Subsurface Microbiology (ISSM 2005) and Environmental Biogeochemistry (ISEB XVII). Jackson Hole, WY. August 14-19 (2005).
5. Demers, C.L. and Sage, Jr., R.W. Effects of road deicing salt on chloride levels in four Adirondack streams. Water Air Soil Pollut. 49, 369-373 (1990).
6. Peters, N.E., and Turk, T.J. Increases in sodium and chloride in the Mohawk River, New York, from 1950s to the 1970s attributed to road salt. Am. Water Resour. Assoc. 17, 586-598 (1981).
7. Demers, C.L. Effects of road deicing salt on aquatic invertebrates. Annual Rev. Ecol. Syst. 10, 147-172 (1992).
8. Blasius, B.J., and Merritt, R.W. Field and laboratory investigations on the effects of road salt (NaCl) on stream macroinvertebrate communities. Environ. Pollut. 120, 219-231 (2002).
9. Larsen, H. Halophilic and halotolerant microorganisms-an overview and historical perspective. FEMS Microbiol. Rev. 39, 3-7 (1986).
10. Kushner, D. J. Halophilic bacteria: life in and out of salt. In: Recent Advances in Microbial Ecology. T. Hattori, Y. Ishida, Y. Maruyama, R. Y. Morita, and A. Uchida (eds). Japan Scientific Societies Press, Tokyo. pp. 60-64. (1989).
11. Ramos-Cormenzana, A. Ecology of moderately halophilic bacteria. In: The Biology of Halophilic Bacteria. R. H. Vreeland and L. I. Hochstein (eds). CRC Press, Inc., Boca Raton, FL., USA pp. 55-86 (1993).
12. Rodriguez-Valera, F. The ecology and taxonomy of aerobic chemoorganotrophic halophilic eubacteria. FEMS Microbiol. Rev. 39, 17-22 (1986).
13. Gauthier, M.J., Lafay, B., Christen, R., Fernandez, L., Acquaviva, M., Bonin, P. and Bertrand, J-C. Marinobacter hydrocarbinoclasticus gen. nov. A new extremely halotolerant, hydrocarbon-degrading marine bacterium. Int. J. Syst. Bacteriol. 42, 568-576 (1992).
14. Kuznetnov, V.D., Zaitseva, T.A., Vakulenko, L.V., and Filippova, S.N. Streptomyces albiaxialis sp. Nov.-a new petroleum hydrocarbon-degrading species of thermo- and halotolerant Streptomyces. Mykrobiologiya. 61, 84-91 (1992).
15. Murray, K.S., Fisher, L.E., Therrien, J., George, B., and Gillespie, J. Assessment and use of indicator bacteria to determine sources of pollution to an urban river. J Great Lakes Res. 27, 220-229 (2001).
16. Quesada, E., Ventosa, A., Rodriguez-Valera, F., Megias, L., and Ramos-Cormenzana, A. Numerical taxonomy of moderately halophilic Gram-negative bacteria from hypersaline soils. J. Gen. Microbiol. 129, 2649-2657 (1983).
17. Gerhardt, P., Murray R.G.E., Costilow, R.N., Nester, E.W., Wood, W.A., Kreig N.R. and Phillips. G.B. Manual of Methods for General Bacteriology. American Society for Microbiology. Washington D.C. (1994).
18. Weisburg, W. W., Barns, S. M., Pelletier, D. A. and Lane, D. J. SSU ribosomal DNA amplification for phylogenetic study. J. Bacteriol. 173, 697-703 (1991).
19. Altschul, S.F., Gish, W., Miller, W., Myers, E.W. and Lipman, D.J. Basic local alignment search tool. J. Mol. Biol. 215, 403-410 (1990).
20. Cole, J.R., Chai, B., Marsh, T.L. Farris, R.J., Wang, Q., Kulam, S.A., Chandra, S., McGarrell, D.M., Schmidt, T.M., Garrity, J. and Tiedje, J.M. The Ribosomal Database Project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy. Nucl. Acid. Res. 31, 442-443 (2003).
21. Kumar, S., Tanura, K., and Nei, M. MEGA3: Integrated software for molecular analysis and sequence alignment. Brief Bioinformatics. 5, 150-163 (2004).
22. Caton, T.M., Witte, L.R., Ngyuen, H.D., Buchheim, J.A., Buchheim, M.A. and Schneegurt, M.A. Halotolerant aerobic heterotrophic bacteria from the Great Salt Plains of Oklahoma. Microb. Ecol. 48, 449-462 (2004).
23. Quillaguama, J., Hatti-Kaul, R., Mattiasson, B., Alvarez, M.T., and Delgado, O. Halomonas boliviensis sp. nov., an alkalitolerant, moderate halophile isolated from soil around a Bolivian hypersaline lake. Int. J. Syst. Evol. Microbiol. 54, 721-725 (2004).
24. Naganuma, T., NgocHua, P., Okamoto, T., Ban, S., Imura, S. and Kanda, H. Depth distribution of euryhaline halophilic bacteria in Suribati Ike, a meromictic lake in East Antarctica. Polar Biol. 28, 964-970 (2005).
25. Takami,H., Inoue,A., Fuji,F. and Horikoshi,K. Microbial flora in the deepest sea mud of the Mariana Trench. FEMS Microbiol. Lett. 152, 279-285 (1997).
26. Jensen, P. R., Gontang, E., Mafnas, C., Mincer, T. J. and Fenical, W. Culturable marine actinomycete diversity from tropical Pacific Ocean sediments. Environ. Microbiol. 7, 1039-1048 (2005).
27. Chapelle, F.H., Morris, J.T., McMahon, P.B., and Zelibor, J.L. Bacterial metabolism and the del-13C composition of groundwater, Floridian aquifer, South Carolina. Geology. 16, 117-121 (1988).
28. Wang, L., Zhou, Q., Zhang, B.S., Li, Z.L., Chua, H., and Ren, D.M. The biodegradation of 1,3-dichlorobenzene by an adapted strain Bacillus cereus PF-11 derived from town-gas industrial effluent. J. Environ. Sci. Health. Part A. 38, 1837-1848 (2003).
29. Zissi, U., Lyberatos, G., and Pavlou, S. Biodegradation of p-aminoazobenzene by Bacillus subtilis under aerobic conditions. J. Ind. Microbiol. Biotechnol. 19, 49-55 (1997).
30. Banat, I.M. Characterization of biosurfactants and their use in pollution removal-State the art. Acta. Biotechnol. 3, 251-267 (1995).
31. Murray, K.S., Tarkas A., Brenan M., Czach M., and Maxfield M. Analysis of surface water quality in an urban watershed: Rouge River, Southeastern Michigan. Michigan Academician. 29, 159-171 (1997).