Identification of lead-regulated genes by suppression subtractive hybridization in the heavy metal accumulator Sesbania drummondii

Planta

Volumn 225, Issue 6, 2007, Pages 1353-1365

  Srivastava, A K ^a   Venkatachalam, P ^b   Raghothama, K G ^b   Sahi, S V ^a  

^a WESTERN KENTUCKY UNIVERSITY   (United States)

^b PURDUE UNIVERSITY   (United States)

Author keywords

Differential gene expression; Heavy metal stress; Lead; Sesbania drummondii; Suppression subtractive hybridization

Indexed keywords

LEAD; PLANT RNA;

AMINO ACID SEQUENCE; ARTICLE; DRUG EFFECT; GENE; GENE EXPRESSION REGULATION; GENETICS; GROWTH, DEVELOPMENT AND AGING; HYBRIDIZATION; METABOLISM; MOLECULAR GENETICS; SEEDLING; SESBANIA;

AMINO ACID SEQUENCE; GENE EXPRESSION REGULATION, PLANT; GENES, PLANT; HYBRIDIZATION, GENETIC; LEAD; MOLECULAR SEQUENCE DATA; RNA, PLANT; SEEDLING; SESBANIA;

SESBANIA; SESBANIA DRUMMONDII;

EID: 34247401305     PISSN: 00320935     EISSN: 14322048     Source Type: Journal    
DOI: 10.1007/s00425-006-0445-3     Document Type: Article

References (42)

1. Alkorta I, Hernandez-Allica J, Becerril JM, Amezaga I, Albizu I, Garbisu C (2004) Recent findings on the phytoremediation of soils contaminated with environmentally toxic heavy metals and metalloids such as zinc, cadmium, lead and arsenic. Rev Environ Sci Biotechnol 3:71-90
2. Brosche M, Schuler MA, Kalbina I, Connor L, Strid A (2002) Gene regulation by low level UB-B radiation: identification by DNA array analysis. Phytochem Photobiol Sci 1:656-664
3. Caturla M, Chaparro C, Schroeyers K, Holsters M (2002) Suppression subtractive hybridization to enrich low-abundance and submergence-enhanced transcripts of adventitious root primordial of Sesbania rostrata. Plant Sci 162:915-921
4. Cho SH, Hoang QT, Kim YY, Shin HY, Ok SH, Bae JM, Shin JS (2006) Proteome analysis of gametophores identified a metallothionein involved in various abiotic stress responses in Physcomitrella patens. Plant Cell Rep 25:475-488
5. Cobbett C, Goldsbrough P (2002) Phytochelatins and metallothioneins: roles in heavy metal detoxification and homeostasis. Annu Rev Plant Biol 53:159-182
6. Diatchenko L, Lukyanov S, Lau YF, Siebert PD (1999) Suppression subtractive hybridization: a versatile method for identifying differentially expressed genes. Meth Enzymol 303:349-380
7. Dietz AC, Schnoor JL (2001) Advances in phytoremediation. Environ Health Perspect 109:163-168
8. Ezaki B, Gardner RC, Ezaki Y, Matsumoto H (2000) Expression of aluminum-induced genes in transgenic Arabidopsis plants can ameliorate aluminum and/or oxidative stress. Plant Physiol 122:657-665
9. Fusco N, Micheletto L, Corso GD, Borgato L, Furini A (2005) Identification of cadmium-regulated genes by cDNA-AFLP in the heavy metal accumulator Brassica juncea L. J Exp Bot 56:3017-3027
10. Garbisu C, Alkorta I (2001) Phytoextraction: a cost-effective plant-based technology for the removal of metals from the environment. Bioresour Technol 77:229-236
11. Garbisu C, Hernandex-Allica J, Barrutia O, Alkorta I, Becerril JM (2002) Phytoremediation: a technology using green plants to remove contaminants from polluted areas. Rev Environ Health 17:75-90
12. Heidenreich B, Seidliz H, Ernst D, Sandermann HJr (1999) Mercuric-ion-induced gene expression in Arabidopsis thaliana. Int J Phytoremediation 1:153-167
13. Heidenreich B, Mayer K, Sandermann H Jr, Ernast D (2001) Mercury-induced genes in Arabidopsis thaliana: identification of induced genes upon long-term mercuric ion exposure. Plant Cell Environ 24:1227-1234
14. Hinderhofer K, Zentgraf U (2001) Identification of a transcription factor specifically expressed at the onset of leaf senescence. Planta 213:469-473
15. Kim D-Y, Bovet L, Kushnir S, Noh EW, Martinoia E, Lee Y (2006) AtATM3 is involved in heavy metal resistance in Arabidopsis. Plant Physiol 140:922-932
16. Krämer U (2005) Phytoremediation: novel approaches to cleaning up polluted soils. Curr Opin Biotechnol 16:133-141
17. Krämer U, Chardonnens AN (2001) The use of transgenic plants in the bioremediation of soils contaminated with trace elements. Appl Microbiol Biotechnol 55:661-672
18. Langebartels C, Schraudner M, Heller W, Ernst D, Sandermann H (2000) Oxidative stress and defense reactions in plants exposed to air pollutants and UV-B radiation. In: Inze D, Van Montagu M (eds) Oxidative stress in plants. Harwood Academic Publishers, Amsterdam, pp 105-135
19. 2+ on chlorophyll fluorescence, growth and nutrient content in Brassica napus. J Exp Bot 49:1031-1039
20. Lee M, Lee K, Lee J, Noh EW, Lee Y (2005) AtPDR12 contributes to lead resistance in Arabidopsis. Plant Physiol 138:827-836
21. Logemann E, Tavernaro A, Schulz W, Somssich IE, Hahlbrock K (2000) UV-light selectivity coinduces supply pathways from primary metabolism and flavonoid secondary product formation in parsley. Proc Nat Acad Sci USA 97:1903-1907
22. 2+. Plant Mol Biol 52:81-89
23. Mahalingam R, Gomez-Buitrago A, Eckardt N, Shah N, Guevara-Garcia A, Day P, Raina R, FedoroV NV (2003) Characterizing the stress/defense transcriptome of Arabidopsis. Genome Biol 4:R20
24. Malecka A, Jarmuszkiewicz W, Tomaszewska B (2001) Antioxidative defense to lead stress in subcellular compartments of pea root cells. Acta Biochim Pol 48:687-698
25. Meagher RB, Heaton ACP (2005) Strategies for the engineered phyotremediation of toxic element pollution: mercury and arsenic. J Ind Microbiol Biotechnol 32:502-513
26. Narusaka Y, Narusaka M, Seki M, Umezawa T, Ishida J, Nakajima M, Enju A, Shinozaki K (2004) Crosstalk in the response to abiotic and biotic stresses in Arabidopsis: analysis of gene expression in cytochrome P450 gene superfamily by cDNA microarray. Plant Mol Biol 55:327-342
27. Papoyan A, Kochian LV (2004) Identification of Thlaspi caerulescens genes that may be involved in heavy metal hyperaccumulation and tolerance. Characterization of a novel heavy metal transporting ATPase. Plant Physiol 136:3814-3823
28. Reymond P, Weber H, Damond M, Farmer EE (2000) Differential gene expression in response to mechanical wounding and insect feeding in Arabidopsis. Plant Cell 12:707-719
29. Richards KD, Schott EJ, Sharma YK, Davis KR, Gardner RG (1998) Aluminum induces oxidative stress genes in Arabidopsis thaliana. Plant Physiol 116:409-418
30. Sahi SV, Bryant NL, Sharma NC, Singh SR (2002) Characterization of lead hperaccumulator shrub, Sesbania drummondii. Environ Sci Technol 36:4676-4680
31. Sahr T, Voigt G, Paretzke HG, Schramel P, Ernst D (2004) Caesium-affected gene expression in Arabidopsis thaliana. New Phytol 165:747-754
32. Salt DE, Prince RC, Pickering IJ, Raskin I (1995) Mechanisms of cadmium mobility and accumulation in Indian mustard. Plant Physiol 109:1427-1433
33. Salt DE, Smith RD, Raskin I (1998) Phytoremediation. Annu Rev Plant Physiol Plant Mol Biol 49:643-668
34. Salt DE, Prince RC, Pickering IJ (2002) Chemical speciation of accumulated metals in plants: evidence from X-ray absorption spectroscopy. Microchem J 71:255-259
35. Sandermann H, Ernst D, Heller W, Langebartels C (1998) Ozone: an abiotic elicitor of plant defense reactions. Trends Plant Sci 3:47-50
36. Sävenstrand H, Brosche M, Angehagen M, Strid A (2000) Molecular markers for ozone stress isolated by suppression subtractive hybridization: specificity of gene expression and identification of a novel stress-regulated gene. Plant Cell Environ 23:689-700
37. Schützendübel A, Schwanz P, Teichmann T, Gross K, Langenfeld-Heyser L, Godbold D L, Polle A (2001) Cadmium-induced changes in antioxidative systems, hydrogen peroxide content, and diVerentiation in Scots pine roots. Plant Physiol 127:887-898
38. Song W-Y, Sohn EJ, Martinoia E, Lee YJ, Yang Y-Y, Jasinski M, Forestier C, Hwang I, Lee Y (2003) Engineering tolerance and accumulation of lead and cadmium in transgenic plant. Nat Biotechnol 21:914-919
39. Suh MC, Choi D, Liu JR (1998) Cadmium resistance in transgenic tobacco plants expressing the Nicotiana glutinosa L. metallothionein-like gene. Mol Cell 8:678-684
40. Verma S, Dubey RS (2003) Lead toxicity induces lipid peroxidation and alters the activities of antioxidant enzymes in growing rice plants. Plant Sci 164:645-655
41. Watt DA (2003) Aluminum-responsive genes in sugarcane: identification and analysis of expression under oxidative stress. J Exp Bot 385:1163-1174
42. 2+-hypertolerant facultative metallophyte Arabidopsis halleri. Plant Cell Eviron 1-14