메뉴 건너뛰기




Volumn 6441, Issue , 2007, Pages

CytometryML, a data standard, which has been designed to interface with other standards

Author keywords

CytometryML; DICOM; Flow cytometry; Informatics; Pathology; PCS; RDF; Schema; Standard; XML

Indexed keywords

DATA STRUCTURES; FLOW CYTOMETRY; MEDICAL IMAGING; PATHOLOGY; XML;

EID: 34247349121     PISSN: 16057422     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1117/12.699617     Document Type: Conference Paper
Times cited : (3)

References (29)
  • 1
    • 33746351729 scopus 로고    scopus 로고
    • W3C Recommendation 14 March
    • "XForms 1.0 (Second Edition)" W3C Recommendation 14 March 2006 (http:/www.w3.org/TR/2006/REC-xforms-20060314/).
    • (2006) XForms 1.0 (Second Edition)
  • 2
    • 34247377660 scopus 로고    scopus 로고
    • Scalable Vector Graphics (SVG) 1.1 Specification, W3C Recommendation 14 January 2003
    • "Scalable Vector Graphics (SVG) 1.1 Specification, W3C Recommendation 14 January 2003" (http://www.w3.org/TR/SVG11/).
  • 3
    • 33847342691 scopus 로고    scopus 로고
    • RDF Primer
    • F. Manola, E. Miller Editors, 10 February
    • F. Manola, E. Miller (Editors), "RDF Primer", W3C Recommendation 10 February 2004, http://www.w3.org/TR/rdf-primer/
    • (2004) Recommendation , vol.W3C
  • 4
    • 33748049446 scopus 로고    scopus 로고
    • P. L. Whetzel, R. R. Brinkman, H. C. Causton, L. Fan, D. Field, I. Fostel, G. Fragoso, T. Gray, M. Heiskanen, T. Hernandez-Boussard, N. Morrison, H. Parkinson, P. Rocca-Serra, S. A Sansone, D. Schober, B. Smith, R. Stevens, C. J. Stoeckert, Jr., C. Taylor, I. White, A. Wood, and the FuGO Working Group, Development of FuGO: An Ontology for Functional Genomics Investigations, OMICSA Journal of Integrative Biology, 10, pp 199-204 (2006).
    • P. L. Whetzel, R. R. Brinkman, H. C. Causton, L. Fan, D. Field, I. Fostel, G. Fragoso, T. Gray, M. Heiskanen, T. Hernandez-Boussard, N. Morrison, H. Parkinson, P. Rocca-Serra, S. A Sansone, D. Schober, B. Smith, R. Stevens, C. J. Stoeckert, Jr., C. Taylor, I. White, A. Wood, and the FuGO Working Group, "Development of FuGO: An Ontology for Functional Genomics Investigations", OMICSA Journal of Integrative Biology, Vol. 10, pp 199-204 (2006).
  • 5
    • 34247380616 scopus 로고    scopus 로고
    • Ontology for Biomedical Investigations
    • "Ontology for Biomedical Investigations", http://obi. sourceforge.net/ (2007).
    • (2007)
  • 6
    • 34247360315 scopus 로고    scopus 로고
    • A Proposal for FCS4
    • "A Proposal for FCS4", http://flowcytsourceforge.net/fcs/ (2006).
    • (2006)
  • 7
    • 33646195995 scopus 로고    scopus 로고
    • R. C. Leif, CytometryML and Other Data Formats, in Manipulation and Analysis of Biomolecules, Cells, and Tissues III, D. Farkas, D. V. Nicolau, and R. C. Leif, Editors, SPIE Proceeding 6088-0L pp. 1-7 (2006).
    • R. C. Leif, "CytometryML and Other Data Formats", in Manipulation and Analysis of Biomolecules, Cells, and Tissues III, D. Farkas, D. V. Nicolau, and R. C. Leif, Editors, SPIE Proceeding Vol. 6088-0L pp. 1-7 (2006).
  • 8
    • 21844455268 scopus 로고    scopus 로고
    • CytometryML, Binary Data Standards
    • D. Farkas, D. V. Nicolau, and R. C. Leif, Editors, SPIE Proc
    • R.C. Leif, "CytometryML, Binary Data Standards", in Manipulation and Analysis of Biomolecules, Cells, and Tissues II, D. Farkas, D. V. Nicolau, and R. C. Leif, Editors, SPIE Proc. Vol. 5699, pp. 325-333 (2005).
    • (2005) Manipulation and Analysis of Biomolecules, Cells, and Tissues II , vol.5699 , pp. 325-333
    • Leif, R.C.1
  • 10
    • 0346874502 scopus 로고    scopus 로고
    • CytometryML, An XML Format based on DICOM for Analytical Cytology Data
    • R. C. Leif, S. B. Leif, and S. H. Leif, "CytometryML, An XML Format based on DICOM for Analytical Cytology Data", Cytometry 54A. pp. 56-65 (2003).
    • (2003) Cytometry , vol.54 A , pp. 56-65
    • Leif, R.C.1    Leif, S.B.2    Leif, S.H.3
  • 11
    • 0031288969 scopus 로고    scopus 로고
    • R. C. Leif and S. B. Leif, Evolution of Flow Cytometry Standard, FCS3.0, into a DICOM-Compatible Format, in Optical Diagnostics of Biological Fluids and Advanced Techniques in Analytical Cytology, Ed. A. V. Priezzhev, T. Asakura, and R. C. Leif. A. Katzir Series Editor, Progress Biomedical Optics Series, SPIE Proceedings Series, 2982, pp 354-366 (1997).
    • R. C. Leif and S. B. Leif, "Evolution of Flow Cytometry Standard, FCS3.0, into a DICOM-Compatible Format", in Optical Diagnostics of Biological Fluids and Advanced Techniques in Analytical Cytology, Ed. A. V. Priezzhev, T. Asakura, and R. C. Leif. A. Katzir Series Editor, Progress Biomedical Optics Series, SPIE Proceedings Series, Vol. 2982, pp 354-366 (1997).
  • 12
    • 0242665664 scopus 로고    scopus 로고
    • CytometryML, a markup language for analytical cytology
    • Manipulation and Analysis of Biomolecules, Cells and Tissues, D. V. Nicolau, I. Enderlein, and R. C. Leif, Editors
    • R.C. Leif, S.H. Leif, S.B. Leif, "CytometryML, a markup language for analytical cytology", in Manipulation and Analysis of Biomolecules, Cells and Tissues, D. V. Nicolau, I. Enderlein, and R. C. Leif, Editors, SPIE Proceedings Vol. 4962 pp 288-297 (2003).
    • (2003) SPIE Proceedings , vol.4962 , pp. 288-297
    • Leif, R.C.1    Leif, S.H.2    Leif, S.B.3
  • 13
    • 0003840045 scopus 로고    scopus 로고
    • W3C Recommendation 28 October
    • "XML Schema Part 2: Datatypes Second Edition", W3C Recommendation 28 October 2004 (http://www.w3.org/TR/2004/REC-xmlschema-2- 20041028/).
    • (2004) XML Schema Part 2: Datatypes Second Edition
  • 15
    • 34247368798 scopus 로고    scopus 로고
    • Digital Imaging and Communications in Medicine (DICOM) Part 3: Information Object Definitions, PS 3.3-2006, National Electrical Manufacturers Association, NEMA, (http://medical.nema.org/dicom/2006/) (2006).
    • "Digital Imaging and Communications in Medicine (DICOM) Part 3: Information Object Definitions", PS 3.3-2006, National Electrical Manufacturers Association, NEMA, (http://medical.nema.org/dicom/2006/) (2006).
  • 16
    • 0024012763 scopus 로고
    • A spiral model of software development and enhancement
    • B.W. Boehm, "A spiral model of software development and enhancement", IEEE Computer, pp. 61-72 (1988).
    • (1988) IEEE Computer , pp. 61-72
    • Boehm, B.W.1
  • 18
    • 34247325070 scopus 로고    scopus 로고
    • Data Standards Task Force, Bioinformatics Standards for Flow Cytometry Consortium: Proposal for International Society for Analytical Cytology ISAC, Gating-ML: Draft Standard for Gating in Flow Cytometry, version 1.1;, 2006
    • Data Standards Task Force, Bioinformatics Standards for Flow Cytometry Consortium: "Proposal for International Society for Analytical Cytology (ISAC), Gating-ML: Draft Standard for Gating in Flow Cytometry, version 1.1"; http://flowcyt.sourceforge.net/gating/ (2006)
  • 19
    • 34247360314 scopus 로고    scopus 로고
    • Data Standards Task Force, Bioinformatics Standards for Flow Cytometry Consortium: Proposal for International Society for Analytical Cytology ISAC, Transformation-ML: Draft Standard for Transformation Description in Flow Cytometry, version 1.0;, 2006
    • Data Standards Task Force, Bioinformatics Standards for Flow Cytometry Consortium: "Proposal for International Society for Analytical Cytology (ISAC), Transformation-ML: Draft Standard for Transformation Description in Flow Cytometry, version 1.0"; http://flowcyt.sourceforge.net/transformation/ (2006).
  • 20
    • 34247365340 scopus 로고    scopus 로고
    • Data Standards Task Force, Bioinformatics Standards for Flow Cytometry Consortium: Proposal for International Society for Analytical Cytology ISAC, Compensation-ML: Draft Standard for Compensation Description in Flow Cytometry, version 1.0;, 2006
    • Data Standards Task Force, Bioinformatics Standards for Flow Cytometry Consortium:" Proposal for International Society for Analytical Cytology (ISAC), Compensation-ML: Draft Standard for Compensation Description in Flow Cytometry, version 1.0"; http://flowcyt.sourceforge.net/compensation/ (2006).
  • 21
    • 33847012539 scopus 로고    scopus 로고
    • RDF Vocabulary Description Language 1.0: RDF Schema, W3C Recommendation 10 February 2004
    • "RDF Vocabulary Description Language 1.0: RDF Schema, W3C Recommendation 10 February 2004" (http://www.w3.org/TR/2004/REC-rdf-schema- 20040210/).
  • 22
    • 34247398630 scopus 로고    scopus 로고
    • R. Brinkman, J. Spidlen, and the Bioinformatics Standards for Flow Cytometry Consortium, FlowRDF: A Proposal for Describing Flow Cytometry Metadata Using the Resource Description Framework, http://flowcyt. sourceforge.net/flowrdf/ (2006)
    • R. Brinkman, J. Spidlen, and the Bioinformatics Standards for Flow Cytometry Consortium, "FlowRDF: A Proposal for Describing Flow Cytometry Metadata Using the Resource Description Framework", http://flowcyt. sourceforge.net/flowrdf/ (2006)
  • 23
    • 33847032086 scopus 로고    scopus 로고
    • RDF Semantics W3C Recommendation 10 February 2004
    • "RDF Semantics W3C Recommendation 10 February 2004", (http://www.w3.org/TR/2004/REC-rdf-mt-20040210/).
  • 24
    • 34247325910 scopus 로고    scopus 로고
    • XML Schema Datatypes in RDF and OWL, W3C Working Group Note 14 March 2006 (http://www.w3.org/TR/2006/NOTE-swbp-xsch-datatypes-20060314/).
    • "XML Schema Datatypes in RDF and OWL, W3C Working Group Note 14 March 2006" (http://www.w3.org/TR/2006/NOTE-swbp-xsch-datatypes-20060314/).
  • 27
    • 34247327676 scopus 로고    scopus 로고
    • FCS, Flow Cytometry Standard
    • Then search for FCS
    • "FCS, Flow Cytometry Standard", http://www.isac-net.org/ Then search for FCS.
  • 28
    • 34247342049 scopus 로고    scopus 로고
    • RDFA: The Easy Way to Publish Your Metadata, XTech 2006:
    • 16-19 May, Amsterdam, The Netherlands
    • M. Birbeck, "RDFA: The Easy Way to Publish Your Metadata, XTech 2006: "Building Web 2.0" - 16-19 May 2006, Amsterdam, The Netherlands, http://xtech06.userulinc.com/schedule/paper/58 (2006).
    • (2006) Building Web 2.0
    • Birbeck, M.1
  • 29
    • 34247329349 scopus 로고    scopus 로고
    • Semantic Web Best Practices and Deployment Working Group, part of the W3C Semantic Web Activity, XML Schema Datatypes in RDF and OWL, W3C Working Group Note 14 March 2006, http://www.w3.org/TR/swbp-xsch-datatypes/.
    • "Semantic Web Best Practices and Deployment Working Group, part of the W3C Semantic Web Activity, XML Schema Datatypes in RDF and OWL", W3C Working Group Note 14 March 2006, http://www.w3.org/TR/swbp-xsch-datatypes/.


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.