A DNA aptamer population specifically detects Leishmania infantum H2A antigen

Laboratory Investigation

Volumn 87, Issue 5, 2007, Pages 409-416

  Ramos, Edurne ^a   Pĩeiro, David ^a   Soto, Manuel ^b   Abanades, Daniel R ^b   Martín, M Elena ^a   Salinas, Matilde ^a   González, Víctor M ^a  

^a HOSPITAL RAMÓN Y CAJAL   (Spain)

^b UNIVERSIDAD AUTÓNOMA DE MADRID   (Spain)

Author keywords

Aptamer; Diagnosis; ELONA; Leishmania infantum; SELEX; Slot blot

Indexed keywords

APTAMER; DNA; H2 ANTIGEN; HISTONE; PARASITE ANTIGEN;

ANTIGEN BINDING; ANTIGEN DETECTION; ARTICLE; DNA SEQUENCE; LEISHMANIA INFANTUM; NONHUMAN; PRIORITY JOURNAL; SLOT BLOT HYBRIDIZATION; WESTERN BLOTTING;

AMINO ACID SEQUENCE; ANIMALS; ANTIGENS, PROTOZOAN; APTAMERS, NUCLEOTIDE; DNA, PROTOZOAN; ENZYME-LINKED IMMUNOSORBENT ASSAY; LEISHMANIA INFANTUM; LEISHMANIASIS, VISCERAL; MOLECULAR SEQUENCE DATA; OLIGONUCLEOTIDE PROBES; PEPTIDE MAPPING; SELEX APTAMER TECHNIQUE;

EID: 34247344113     PISSN: 00236837     EISSN: 15300307     Source Type: Journal    
DOI: 10.1038/labinvest.3700535     Document Type: Article

References (31)

1. Tuerk C, Gold L. Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase. Science 1990;249:505-510.
2. Ellington AD, Szostak JW. Selection in vitro of single-stranded DNA molecules that fold into specific ligand-binding structures. Nature 1992;355:850-852.
3. Famulok M. Oligonucleotide aptamers that recognize small molecules. Curr Opin Struct Biol 1999;9:324-329.
4. Mannironi C, Di Nardo A, Fruscoloni P, et al. In vitro selection of dopamine RNA ligands. Biochemistry 1997;36:9726-9734.
5. Nieuwlandt D, Wecker M, Gold L. In vitro selection of RNA ligands to substance P. Biochemistry 1995;34:5651-5659.
6. Green LS, Jellinek D, Jenison R, et al. Inhibitory DNA ligands to plateletderived growth factor B-chain. Biochemistry 1996;35:14413-14424.
7. Takeno H, Yamamoto S, Tanaka T, et al. Selection of an RNA molecule that specifically inhibits the protease activity of subtilisin. J Biochem (Tokyo) 1999;125:1115-1119.
8. Bock LC, Griffin LC, Latham JA, et al. Selection of single-stranded DNA molecules that bind and inhibit human thrombin. Nature 1992;355:564-566.
9. Moreno M, Rincon E, Pineiro D, et al. Selection of aptamers against KMP-11 using colloidal gold during the SELEX process. Biochem Biophys Res Commun 2003;308:214-218.
10. Green LS, Jellinek D, Bell C, et al. Nuclease-resistant nucleic acid ligands to vascular permeability factor/vascular endothelial growth factor. Chem Biol 1995;2:683-695.
11. Hermann T, Patel DJ. Adaptive recognition by nucleic acid aptamers. Science 2000;287:820-825.
12. Marshall KA, Robertson MP, Ellington AD. A biopolymer by any other name would bind as well: a comparison of the ligand-binding pockets of nucleic acids and proteins. Structure 1997;5:729-734.
13. Gold L, Polisky B, Uhlenbeck O, et al. Diversity of oligonucleotide functions. Annu Rev Biochem 1995;64:763-797.
14. Uphoff KW, Bell SD, Ellington AD. In vitro selection of aptamers: the dearth of pure reason. Curr Opin Struct Biol 1996;6:281-288.
15. Jenison RD, Gill SC, Pardi A, et al. High-resolution molecular discrimination by RNA. Science 1994;263:1425-1429.
16. Galanti N, Galindo V, Sabaj V, et al. Histone genes in Trypanosomatids. Parasitology Today 1998;14:64-70.
17. Requena JM, Alonso C, Soto M. Evolutionarily conserved proteins as prominent immunogens during Leishmania infections. Parasitol Today 2000;16:246-250.
18. Soto M, Requena JM, Quijada L, et al. Multicomponent chimeric antigen for serodiagnosis of canine visceral leishmaniasis. J Clin Microbiol 1998;36:58-63.
19. Iborra S, Soto M, Carrion J, et al. Vaccination with a plasmid DNA cocktail encoding the nucleosomal histones of Leishmania confers protection against murine cutaneous leishmaniosis. Vaccine 2004;22:3865-3876.
20. Shi PY, Maizels N, Weiner AM. Recovery of soluble, active recombinant protein from inclusion bodies. Biotechniques 1997;23:1036-1038.
21. Morris KN, Jensen KB, Julin CM, et al. High affinity ligands from in vitro selection: complex targets. Proc Natl Acad Sci USA 1998;95:2902-2907.
22. Schreiber E, Matthias P, Muller MM, et al. Rapid detection of octamer binding proteins with 'mini-extracts', prepared from a small number of cells. Nucleic Acids Res 1989;17:6419.
23. Houghten RA. General method for the rapid solid-phase synthesis of large numbers of peptides: specificity of antigen-antibody interaction at the level of individual amino acids. Proc Natl Acad Sci USA 1985;82:5131-5135.
24. Soto M, Requena JM, Gomez LC, et al. Molecular characterization of a Leishmania donovani infantum antigen identified as histone H2A. Eur J Biochem 1992;205:211-216.
25. Soto M, Requena JM, Quijada L, et al. Mapping of the linear antigenic determinants from the Leishmania infantum histone H2A recognized by sera from dogs with leishmaniasis. Immunol Lett 1995;48:209-214.
26. Drolet DW, Moon-McDermott L, Romig TS. An enzyme-linked oligonucleotide assay. Nat Biotechnol 1996;14:1021-1025.
27. Rye PD, Nustad K. Immunomagnetic DNA aptamer assay. Biotechniques 2001;30:290-292, 294-5.
28. Yang X, Li X, Prow TW, et al. Immunofluorescence assay and flowcytometry selection of bead-bound aptamers. Nucleic Acids Res 2003;31:e54.
29. Lee M, Walt DR. A fiber-optic microarray biosensor using aptamers as receptors. Anal Biochem 2000;282:142-146.
30. Liss M, Petersen B, Wolf H, et al. An aptamer-based quartz crystal protein biosensor. Anal Chem 2002;74:4488-4495.
31. Baldrich E, Acero JL, Reekmans G, et al. Displacement enzyme linked aptamer assay. Anal Chem 2005;77:4774-4784.