Structural characterization of dimeric murine aminoacylase III

FEBS Letters

Volumn 581, Issue 9, 2007, Pages 1898-1902

  Ryazantsev, Sergey ^a   Abuladze, Natalia ^a   Newman, Debra ^a   Bondar, Galyna ^a   Kurtz, Ira ^a   Pushkin, Alexander ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

3D reconstruction; Deacetylation; Electron microscopy; Kidney; Murine aminoacylase III

Indexed keywords

AMINOACYLASE; AMINOACYLASE 3; DIMER; UNCLASSIFIED DRUG;

ANIMAL CELL; ARTICLE; CONTROLLED STUDY; ELECTRON MICROSCOPY; ENZYME ACTIVITY; ENZYME ANALYSIS; ENZYME STRUCTURE; HUMAN; HUMAN CELL; MOUSE; NONHUMAN; PRIORITY JOURNAL; PROTEIN DOMAIN; THREE DIMENSIONAL IMAGING;

AMIDOHYDROLASES; ANIMALS; CATALYSIS; DIMERIZATION; IMAGING, THREE-DIMENSIONAL; MICE; MICROSCOPY, ELECTRON; MODELS, MOLECULAR; TRYPSIN;

MURINAE;

EID: 34247231405     PISSN: 00145793     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.febslet.2007.03.088     Document Type: Article

References (25)

1. Anders M.W., and Dekant W. Aminoacylases Adv. Pharmacol. 27 (1994) 431-448
2. Giardina T., Biagini A., Dalle Ore F., Ferre E., Reynier M., and Puigserver A. The hog intestinal mucosa acylase I: subcellular localization, isolation, kinetic studies and biological function. Biochemie 79 (1997) 265-273
3. Heese D., Loffler H.G., and Rohm K.H. Further characterization on porcine kidney aminoacylase 1 reveals close similarity to "renal dipeptidase". Biol. Chem. Hoppe-Seyler 369 (1988) 559-566
4. Kördel W., and Schneider F. Renal aminoacylase, a zink enzyme. Z. Naturforsch. 32C (1977) 342-344
5. Uttamsingh V., Keller D.A., and Anders M.W. Acylase I-catalyzed deacetylation of N-acetyl-l-cysteines. Chem. Res. Toxicol. 11 (1998) 800-809
6. Giardina T., Perrier J., and Puigserver A. The rat kidney acylase 1, characterization and molecular cloning. Differences with other acylases. Eur. J. Biochem. 267 (2000) 6249-6255
7. Lindner H.A., Alary A., Boju L.I., Sulea T., and Menard R. Roles of dimerization domain residues in binding and catalysis by aminoacylase-1. Biochemistry 44 (2005) 15645-15651
8. Lindner H.A., Lunin V.V., Alary A., Hecker R., Cygler M., and Menard R. Essential roles of zink ligation and enzyme dimerization for catalysis of the aminoacylase-1/M20 family. J. Biol. Chem. 278 (2003) 44496-44504
9. Palm G.J., and Röhm K.H. Aminoacylase I from porcine kidney: identification and characterization of two major protein domains. J. Prot. Chem. 14 (1995) 233-240
10. Uttamsingh V., and Anders M.W. Acylase-catalyzed deacetylation of haloalkene-derived mercapturates. Chem. Res. Toxicol. 12 (1999) 937-942
11. Pushkin A., Carpenito G., Abuladze N., Newman D., Tsuprun V., Ryazantsev S., Motemoturu S., Sassani P., Solovieva N., Dukkipati R., and Kurtz I. Structural characterization, tissue distribution, and functional expression of murine aminoacylase III. Am. J. Physiol. 286 (2004) C848-C856
12. Driessen H.P., de Jong W.W., Tesser G.I., and Bloemendal H. The mechanism of N-terminal acetylation of proteins. CRC Crit. Rev. Biochem. 18 (1985) 281-325
13. Perrier J., Durand A., Giardina T., and Puigserver A. Catabolism of intracellular N-terminal acetylated proteins: involvement of acylpeptide hydrolase and acylase. Biochimie 87 (2005) 673-685
14. Newman D., Abuladze N., Scholz K., Dekant W., Tsuprun V., Ryazantsev S., Bondar G., Sassani P., Kurtz I., and Pushkin A. Specificity of aminoacylase III-mediated deacetylation of mercapturic acids. Drug Metabol. Dispos. 35 (2007) 43-50
15. Anders M.W., Dekant W., and Vamvakas S. Formation and fate of nephrotoxic and cytotoxic glutathione S-conjugates: cysteine conjugate beta-lyase pathway. Adv. Pharmacol. 27 (1994) 115-162
16. Hayden P.J., and Stevens J.L. Cysteine conjugate toxicity, metabolism and binding to macromolecules in isolated rat kidney mitochondria. Mol. Pharmacol. 37 (1990) 468-476
17. Suzuki S., and Tateishi M. Purification and characterization of a rat liver enzyme catalyzing N-deacetylation of mercapturic acid conjugates. Drug Metabol. Dispos. 9 (1981) 573-577
18. Ludtke S.J., Baldwin P.R., and Chiu W. EMAN: semiautomated software for high-resolution single-particle reconstructions. J. Struct. Biol. 128 (1999) 82-97
19. Udenfriend S., Stein S., Bohlen P., Dairman W., Leimgruber W., and Weigele M. Fluorescamine: a reagent for assay of amino acids, peptides, proteins, and primary amines in the picomole range. Science 178 (1972) 871-872
20. Ryazantsev S. Use of "double-carbon" negative staining technique in biological applications. Microsc. Today April (2001) 16-19
21. Frank J. Three Dimensional Electron Microscopy of Macromolecular Assemblies. first ed. (1996), Academic Press, San Diego pp. 208-209
22. Bottcher B., Wynne S.A., and Crowther R.A. Determination of the fold of the core protein of hepatitis B virus by electron cryomicroscopy. Nature 386 (1997) 88-91
23. 2+ channel by electron cryomicroscopy. Proc. Natl. Acad. Sci. USA 99 (2002) 10370-10375
24. http://www.cgl.ucsf.edu/chimera.
25. Brink J., Ludtke S.J., Yang C.Y., Gu Z.W., Wakil S.J., and Chiu W. Quaternary structure of human fatty acid synthase by electron cryomicroscopy. Proc. Natl. Acad. Sci. USA 99 (2002) 138-143