14th International HLA and Immunogenetics Workshop: Report of progress in methodology, data collection, and analyses

Tissue Antigens

Volumn 69, Issue SUPPL. 1, 2007, Pages 185-187

  Single, R M ^a   Meyer, D ^b   MacK, S J ^c,d   Lancaster, A ^e   Erlich, H A ^c,d   Thomson, G ^e  

^a University of Vermont   (United States)

^b UNIVERSITY OF SÃO PAULO   (Brazil)

^c ROCHE MOLECULAR SYSTEMS   (United States)

^d CHILDREN S HOSPITAL OAKLAND   (United States)

^e UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Anthropology; Biostatistics; International Workshop; Major Histocompatibility Complex database; Population genetics

Indexed keywords

ALLELE; AMINO ACID SEQUENCE; CONFERENCE PAPER; DATA ANALYSIS SOFTWARE; GENETIC ANALYSIS; GENETIC VARIABILITY; GENOTYPE; HAPLOTYPE; HLA SYSTEM; HUMAN; INFORMATION PROCESSING; METHODOLOGY; NUCLEOTIDE SEQUENCE; POPULATION GENETICS; PRIORITY JOURNAL; QUALITY CONTROL; SEQUENCE ANALYSIS;

DATA COLLECTION; DATABASES; GENETICS, POPULATION; HISTOCOMPATIBILITY TESTING; HLA ANTIGENS; HUMANS; IMMUNOGENETICS; INTERNET; MAJOR HISTOCOMPATIBILITY COMPLEX;

EID: 34247205463     PISSN: 00012815     EISSN: 13990039     Source Type: Journal    
DOI: 10.1111/j.1399-0039.2006.00767.x     Document Type: Conference Paper

References (12)

1. Lancaster A, Nelson MP, Meyer D, Single RM, Thomson G. PyPop: a software framework for population genomics: analyzing large-scale multi-locus genotype data. Pac Symp Biocomput 2003: 8: 514-25.
2. Lancaster A, Nelson MP, Single RM, Meyer D, Thomson G. Software framework for the biostatistics core. In: Hansen JA, ed. Immunobiology of the Human MHC: Proceedings of the 13th International Histocompatibility Workshop and Conference, Volume I. Seattle: IHWG Press, 2007.
3. Mack SJ, Sanchez-Mazas A, Single RM et al. Population samples and genotyping technology. Tissue Antigens 2007: 69 (Suppl. 1): 188-91.
4. Meyer D, Single RM, Mack SJ, Lancaster AK, Nelson MP, Thomson G. Haplotype frequencies and linkage disequilibrium among classical HLA genes. In: Hansen JA, ed. Immunobiology of the Human MHC: Proceedings of the 13th International Histocompatibility Workshop and Conference, Volume I. Seattle: IHWG Press, 2007.
5. Single RM, Meyer D, Mack SJ et al. Single locus polymorphism of classical HLA genes. In: Hansen JA, ed. Immunobiology of the Human MHC: Proceedings of the 13th International Histocompatibility Workshop and Conference, Volume I. Seattle: IHWG Press, 2007.
6. Single RM, Malkki M, Thomson G, Mather KA, Carrington M, Petersdorf E. Linkage disequilibrium and HLA-A: B: DRB1 haplotype probabilities for class I, II, III microsatellite markers in unrelated donor hematopoietic stem cell transplantation. In: Hansen JA, ed. Immunobiology of the Human MHC: Proceedings of the 13th International Histocompatibility Workshop and Conference, Volume I. Seattle: IHWG Press, 2007.
7. Thomson G, Hongzhe L, Dorman J et al. Statistical approaches for analyses of HLA-associated and other complex diseases. In: Hansen JA, ed. Immunobiology of the Human MHC: Proceedings of the 13th International Histocompatibility Workshop and Conference, Volume I. Seattle: IHWG Press, 2007.
8. Salamon H, Klitz W, Easteal S et al. Evolution of HLA class II molecules: allelic and amino acid site variability across populations. Genetics 1999: 152: 393-400.
9. Valdes AM, Meyer D, McWeeney SK, Nelson MP, Thomson G. Locus and population specific evolution in HLA class II genes. Ann Hum Genet 1999: 63: 27-43.
10. Lancaster AK, Single RM,Solberg OD, Nelson MP, Thomson G. PyPop update - a software pipeline for large-scale multilocus population genomics. Tissue Antigens 2007: 69 (Suppl. 1): 192-7.
11. Prugnolle F, Manica A, Charpentier M, Guegan JF, Guernier V, Balloux F. Pathogen-driven selection and worldwide HLA class I diversity. Curr Biol 2005: 15: 1022-7.
12. Meyer D, Single RM, Mack SJ, Erlich H, Thomson G. Signatures of demographic history and natural selection in the human MHC loci. Genetics 2006: 173: 2121-42.