메뉴 건너뛰기




Volumn 83, Issue 2, 2007, Pages 363-369

Sub-5-fs real-time spectroscopy of transition states in bacteriorhodopsin during retinal isomerization

Author keywords

[No Author keywords available]

Indexed keywords


EID: 34247186363     PISSN: 00318655     EISSN: None     Source Type: Journal    
DOI: 10.1562/2006-08-19-IR-1006     Document Type: Conference Paper
Times cited : (23)

References (34)
  • 1
    • 0000810473 scopus 로고    scopus 로고
    • Pulse-front-matched optical parametric amplification for sub-10-fs pulse generation tunable in the visible and near infrared
    • Shirakawa, A., I. Sakane and T. Kobayashi (1998) Pulse-front-matched optical parametric amplification for sub-10-fs pulse generation tunable in the visible and near infrared. Opt. Lett. 23, 1292-1294.
    • (1998) Opt. Lett , vol.23 , pp. 1292-1294
    • Shirakawa, A.1    Sakane, I.2    Kobayashi, T.3
  • 2
    • 0032620590 scopus 로고    scopus 로고
    • Sub-5-fs visible pulse generation by pulse-front-matched non-collinear optical parametric amplification
    • Shirakawa, A., I. Sakane, M. Takasaka and T. Kobayashi (1999) Sub-5-fs visible pulse generation by pulse-front-matched non-collinear optical parametric amplification. Appl. Phys. Lett. 74, 2268-2270.
    • (1999) Appl. Phys. Lett , vol.74 , pp. 2268-2270
    • Shirakawa, A.1    Sakane, I.2    Takasaka, M.3    Kobayashi, T.4
  • 3
    • 0016376428 scopus 로고
    • Isolation of the cell membrane of Halobacterium halobium and its fractionation into red and purple membrane
    • Oesterhelt, D. and W. Stoeckenius (1974) Isolation of the cell membrane of Halobacterium halobium and its fractionation into red and purple membrane. Meth. Enzymol. 31, 667-678.
    • (1974) Meth. Enzymol , vol.31 , pp. 667-678
    • Oesterhelt, D.1    Stoeckenius, W.2
  • 4
    • 0345082644 scopus 로고
    • Direct observation of the transition-state
    • Polanyi, J. C. and A. H. Zewail (1995) Direct observation of the transition-state. Acc. Chem. Res. 28, 119-132.
    • (1995) Acc. Chem. Res , vol.28 , pp. 119-132
    • Polanyi, J.C.1    Zewail, A.H.2
  • 5
    • 36549093382 scopus 로고
    • Femtosecond real-time observation of wave packet oscillations (resonance) in dissociation reactions
    • Rose, T. S., M. J. Rosker and A. H. Zewail (1988) Femtosecond real-time observation of wave packet oscillations (resonance) in dissociation reactions. J. Chem. Phys. 88, 6672-6673.
    • (1988) J. Chem. Phys , vol.88 , pp. 6672-6673
    • Rose, T.S.1    Rosker, M.J.2    Zewail, A.H.3
  • 6
    • 0000310740 scopus 로고
    • Femtosecond real-time probing of reactions IV. The reactions of alkali halides
    • Rose, T. S., M. J. Rosker and A. H. Zewail (1989) Femtosecond real-time probing of reactions IV. The reactions of alkali halides. J. Chem. Phys. 91, 7415-7436.
    • (1989) J. Chem. Phys , vol.91 , pp. 7415-7436
    • Rose, T.S.1    Rosker, M.J.2    Zewail, A.H.3
  • 7
    • 0034647672 scopus 로고    scopus 로고
    • Characterization of a conical intersection between the ground and first excited state for a retinal analog
    • Molnar, F., M. Ben-Nun, T. J. Martineez and K. Schulten (2000) Characterization of a conical intersection between the ground and first excited state for a retinal analog. J. Mol. Struct. (Theochem.) 506, 169-178.
    • (2000) J. Mol. Struct. (Theochem.) , vol.506 , pp. 169-178
    • Molnar, F.1    Ben-Nun, M.2    Martineez, T.J.3    Schulten, K.4
  • 8
    • 0001952661 scopus 로고
    • Picosecond time-resolved resonance Raman spectroscopy of the initial trans-cis isomerisation in the bacteriorhodopsin photocycle
    • Atkinson, G. H., T. L. Brack, D. Blanchard and G. Rumbles (1989) Picosecond time-resolved resonance Raman spectroscopy of the initial trans-cis isomerisation in the bacteriorhodopsin photocycle. Chem. Phys. 131, 1-15.
    • (1989) Chem. Phys , vol.131 , pp. 1-15
    • Atkinson, G.H.1    Brack, T.L.2    Blanchard, D.3    Rumbles, G.4
  • 9
    • 0025370049 scopus 로고
    • Subpicosecond resonance Raman spectra of the early intermediates in the photocycle of bacteriorhodopsin
    • van den Berg, R., D. J. Jang, H. C. Bitting and M. A. El-Sayed (1990) Subpicosecond resonance Raman spectra of the early intermediates in the photocycle of bacteriorhodopsin. Biophys. J. 58, 135-141.
    • (1990) Biophys. J , vol.58 , pp. 135-141
    • van den Berg, R.1    Jang, D.J.2    Bitting, H.C.3    El-Sayed, M.A.4
  • 10
    • 33751500154 scopus 로고
    • Picosecond time-resolved resonance Raman spectroscopy of bacteriorhodopsin's J, K, and KL intermediates
    • Doig, S. J., P. J. Reid and R. A. Mathies (1991) Picosecond time-resolved resonance Raman spectroscopy of bacteriorhodopsin's J, K, and KL intermediates. J. Phys. Chem. 95, 6372-6379.
    • (1991) J. Phys. Chem , vol.95 , pp. 6372-6379
    • Doig, S.J.1    Reid, P.J.2    Mathies, R.A.3
  • 12
    • 0001051029 scopus 로고    scopus 로고
    • Vibrational spectrum of the J-625 intermediate in the room temperature bacteriorhodopsin photocycle
    • Atkinson, G. H., L. Ujj and Y. Zhou (2000) Vibrational spectrum of the J-625 intermediate in the room temperature bacteriorhodopsin photocycle. J. Phys. Chem. A 104, 4130-4139.
    • (2000) J. Phys. Chem. A , vol.104 , pp. 4130-4139
    • Atkinson, G.H.1    Ujj, L.2    Zhou, Y.3
  • 13
    • 0027333436 scopus 로고
    • The first step in vision occurs in femtoseconds: Complete blue and red spectral studies
    • Peteanu, L. A., R. W. Shoenlein, Q. Wang, R. A. Mathies and C. V. Shank (1993) The first step in vision occurs in femtoseconds: Complete blue and red spectral studies. Proc. Natl Acad. Sci. USA 90, 11762-11766.
    • (1993) Proc. Natl Acad. Sci. USA , vol.90 , pp. 11762-11766
    • Peteanu, L.A.1    Shoenlein, R.W.2    Wang, Q.3    Mathies, R.A.4    Shank, C.V.5
  • 14
    • 33751384971 scopus 로고
    • Femtosecond dynamics of cis-trans isomerization in a visual pigment analog: Isorhodopsin
    • Shoenlein, R. W., L. A. Peteanu, Q. Wang, R. A. Mathies and C. V. Shank (1993) Femtosecond dynamics of cis-trans isomerization in a visual pigment analog: Isorhodopsin. J. Phys. Chem. 97, 12087-12092.
    • (1993) J. Phys. Chem , vol.97 , pp. 12087-12092
    • Shoenlein, R.W.1    Peteanu, L.A.2    Wang, Q.3    Mathies, R.A.4    Shank, C.V.5
  • 15
    • 0024279842 scopus 로고
    • Direct observation of the femtosecond excited-state cis-trans isomerization in bacteriorhodopsin
    • Mathies, R. A., C. H. Brito Cruz, W. T. Pollard and C. V. Shank (1988) Direct observation of the femtosecond excited-state cis-trans isomerization in bacteriorhodopsin. Science 240, 777-779.
    • (1988) Science , vol.240 , pp. 777-779
    • Mathies, R.A.1    Brito Cruz, C.H.2    Pollard, W.T.3    Shank, C.V.4
  • 16
    • 0030299802 scopus 로고    scopus 로고
    • The photoisomerization of retinal in bacteriorhodopsin: Experimental evidence for a three-state model
    • Hasson, K. C., F. C. Gai and P. A. Anfinrud (1996) The photoisomerization of retinal in bacteriorhodopsin: Experimental evidence for a three-state model. Proc. Natl Acad. Sci. USA 93, 15124-15129.
    • (1996) Proc. Natl Acad. Sci. USA , vol.93 , pp. 15124-15129
    • Hasson, K.C.1    Gai, F.C.2    Anfinrud, P.A.3
  • 17
    • 0030601588 scopus 로고    scopus 로고
    • Excited state dynamics of bacteriorhodopsin revealed by transient stimulated emission spectra
    • Haran, G., K. Wynne, A. H. Xie, Q. He, M. Chance and R. M. Hochstrasser (1996) Excited state dynamics of bacteriorhodopsin revealed by transient stimulated emission spectra. Chem. Phys. Lett. 261, 389-395.
    • (1996) Chem. Phys. Lett , vol.261 , pp. 389-395
    • Haran, G.1    Wynne, K.2    Xie, A.H.3    He, Q.4    Chance, M.5    Hochstrasser, R.M.6
  • 18
    • 0032549731 scopus 로고    scopus 로고
    • Chemical dynamics in proteins: The photoisomerization of retinal in bacteriorhodopsin
    • Gai, F., K. C. Hasson, J. C. McDonald and P. A. Anfinrud (1998) Chemical dynamics in proteins: The photoisomerization of retinal in bacteriorhodopsin. Science 279, 1886-1891.
    • (1998) Science , vol.279 , pp. 1886-1891
    • Gai, F.1    Hasson, K.C.2    McDonald, J.C.3    Anfinrud, P.A.4
  • 19
    • 0027752269 scopus 로고
    • Femtosecond time-resolved fluorescence spectroscopy of bacteriorhodopsin - direct observation of excited-state dynamics in the primary step of the proton pump cycle
    • Du, M. and G. R. Fleming (1993) Femtosecond time-resolved fluorescence spectroscopy of bacteriorhodopsin - direct observation of excited-state dynamics in the primary step of the proton pump cycle. Biophys. Chem. 48, 101-111.
    • (1993) Biophys. Chem , vol.48 , pp. 101-111
    • Du, M.1    Fleming, G.R.2
  • 20
    • 0031660699 scopus 로고    scopus 로고
    • Three electronic state model of the primary phototransformation of bacteriorhodopsin
    • Humphrey, W., H. Lu, I. Logunov, H. J. Werner and K. Schulten (1998) Three electronic state model of the primary phototransformation of bacteriorhodopsin. Biophys. J. 75, 1689-1699.
    • (1998) Biophys. J , vol.75 , pp. 1689-1699
    • Humphrey, W.1    Lu, H.2    Logunov, I.3    Werner, H.J.4    Schulten, K.5
  • 21
    • 0030469179 scopus 로고    scopus 로고
    • Reexamining the primary light-induced events in bacteriorhodopsin using a synthetic C13=C14-locked chromophore
    • Zhong, Q., S. Ruhman and M. Ottolenghi (1996) Reexamining the primary light-induced events in bacteriorhodopsin using a synthetic C13=C14-locked chromophore. J. Am. Chem. Soc. 118, 12828-12829.
    • (1996) J. Am. Chem. Soc , vol.118 , pp. 12828-12829
    • Zhong, Q.1    Ruhman, S.2    Ottolenghi, M.3
  • 22
    • 0345845124 scopus 로고    scopus 로고
    • On the nature of the primary light-induced events in bacteriorhodopsin: Ultrafast spectroscopy of native and C13=C14 locked pigments
    • Ye, T., N. Friedman, Y. Gat, G. H. Atkinson, M. Sheves, M. Ottolenghi and S. Ruhman (1999) On the nature of the primary light-induced events in bacteriorhodopsin: Ultrafast spectroscopy of native and C13=C14 locked pigments. J. Phys. Chem. B 103, 5122-5130.
    • (1999) J. Phys. Chem. B , vol.103 , pp. 5122-5130
    • Ye, T.1    Friedman, N.2    Gat, Y.3    Atkinson, G.H.4    Sheves, M.5    Ottolenghi, M.6    Ruhman, S.7
  • 23
    • 0032475417 scopus 로고    scopus 로고
    • Primary step in bacteriorhodopsin photosynthesis: Bond stretch rather than angle twist of its retinal excited-state structure
    • Song, L. and M. A. El-Sayed (1998) Primary step in bacteriorhodopsin photosynthesis: Bond stretch rather than angle twist of its retinal excited-state structure. J. Am. Chem. Soc. 120, 8889-8890.
    • (1998) J. Am. Chem. Soc , vol.120 , pp. 8889-8890
    • Song, L.1    El-Sayed, M.A.2
  • 25
    • 0033540663 scopus 로고    scopus 로고
    • Initial excited-state relaxation of the isolated 11-cis protonated Schiff base of retinal: Evidence for in-plane motion from ab initio quantum chemical simulation of the resonance Raman spectrum
    • Garavelli, M., F. Negri and M. Olivucci (1999) Initial excited-state relaxation of the isolated 11-cis protonated Schiff base of retinal: Evidence for in-plane motion from ab initio quantum chemical simulation of the resonance Raman spectrum. Am. Chem. Soc. 121, 1023-1029.
    • (1999) Am. Chem. Soc , vol.121 , pp. 1023-1029
    • Garavelli, M.1    Negri, F.2    Olivucci, M.3
  • 26
    • 0036818225 scopus 로고    scopus 로고
    • Adaptive shaping of two-cycle visible pulses using a flexible mirror
    • Baltuska, A. and T. Kobayashi (2002) Adaptive shaping of two-cycle visible pulses using a flexible mirror. Appl. Phys. B: Lasers Opt. 75, 427-443.
    • (2002) Appl. Phys. B: Lasers Opt , vol.75 , pp. 427-443
    • Baltuska, A.1    Kobayashi, T.2
  • 27
    • 0000236364 scopus 로고    scopus 로고
    • Tunable visible and nearinfrared pulse generator in a 5 fs regime
    • Kobayashi, T. and A. Shirakawa (2000) Tunable visible and nearinfrared pulse generator in a 5 fs regime. Appl. Phys. B 70, S239-S246.
    • (2000) Appl. Phys. B , vol.70
    • Kobayashi, T.1    Shirakawa, A.2
  • 28
    • 0343634735 scopus 로고
    • Theory of dynamic absorption spectroscopy of nonstationary states. 4. Application to 12-fs resonant impulsive Raman spectroscopy of bacteriorhodopsin
    • Pollard, W. T., S. L. Dexheimer, W. Qang, L. A. Peteanu, C. V. Shank and R. A. Mathies (1992) Theory of dynamic absorption spectroscopy of nonstationary states. 4. Application to 12-fs resonant impulsive Raman spectroscopy of bacteriorhodopsin. J. Phys. Chem. 96, 6147-6158.
    • (1992) J. Phys. Chem , vol.96 , pp. 6147-6158
    • Pollard, W.T.1    Dexheimer, S.L.2    Qang, W.3    Peteanu, L.A.4    Shank, C.V.5    Mathies, R.A.6
  • 29
    • 2542643371 scopus 로고    scopus 로고
    • Femtosecond chirped pulse excitation of vibrational wave packets in LD690 and bacteriorhodopsin
    • Bardeen, C. J., Q. Wang and C. V. Shank (1998) Femtosecond chirped pulse excitation of vibrational wave packets in LD690 and bacteriorhodopsin. J. Phys. Chem. A 102, 2759-2766.
    • (1998) J. Phys. Chem. A , vol.102 , pp. 2759-2766
    • Bardeen, C.J.1    Wang, Q.2    Shank, C.V.3
  • 30
    • 0035969547 scopus 로고    scopus 로고
    • Real-time spectroscopy of transition states in bacteriorhodopsin during retinal isomerization
    • Kobayashi, T., T. Saito and H. Ohtani (2001) Real-time spectroscopy of transition states in bacteriorhodopsin during retinal isomerization. Naure 414, 531-534.
    • (2001) Naure , vol.414 , pp. 531-534
    • Kobayashi, T.1    Saito, T.2    Ohtani, H.3
  • 31
    • 0020486598 scopus 로고
    • Assignment and interpretation of hydrogen out-of-plane vibrations in the resonance Raman spectra of rhodopsin and bathorhodopsin
    • Eyring, G., B. Curry, A. Broek, J. Lugtenburg and R. Mathies (1982) Assignment and interpretation of hydrogen out-of-plane vibrations in the resonance Raman spectra of rhodopsin and bathorhodopsin. Biochemistry 21, 384-393.
    • (1982) Biochemistry , vol.21 , pp. 384-393
    • Eyring, G.1    Curry, B.2    Broek, A.3    Lugtenburg, J.4    Mathies, R.5
  • 32
    • 0000678850 scopus 로고
    • Resonance Raman excitation profiles of bacteriorhodopsin
    • Myers, A. B., R. A. Harris and R. A. Mathies (1983) Resonance Raman excitation profiles of bacteriorhodopsin. J. Chem. Phys. 79, 603-613.
    • (1983) J. Chem. Phys , vol.79 , pp. 603-613
    • Myers, A.B.1    Harris, R.A.2    Mathies, R.A.3
  • 33
    • 0000722312 scopus 로고    scopus 로고
    • Real-time vibrational mode-coupling associated with ultrafast geometrical relaxation in polydiacetylene induced by sub-5-fs pulses
    • Kobayashi, T., A. Shirakawa, H. Matsuzawa and H. Nakanishi (2000) Real-time vibrational mode-coupling associated with ultrafast geometrical relaxation in polydiacetylene induced by sub-5-fs pulses. Chem. Phys. Lett. 321, 385-393.
    • (2000) Chem. Phys. Lett , vol.321 , pp. 385-393
    • Kobayashi, T.1    Shirakawa, A.2    Matsuzawa, H.3    Nakanishi, H.4
  • 34
    • 36749121298 scopus 로고
    • Raman spectral shifts relevant to electron delocalization in polydiacetylenes
    • Baughman, R. H., J. D. Witt and K. C. Yee (1974) Raman spectral shifts relevant to electron delocalization in polydiacetylenes. J. Chem. Phys. 60, 4755-4759.
    • (1974) J. Chem. Phys , vol.60 , pp. 4755-4759
    • Baughman, R.H.1    Witt, J.D.2    Yee, K.C.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.