메뉴 건너뛰기




Volumn 30, Issue 6-7, 2007, Pages 1593-1607

Visualization and modeling of the colonization dynamics of a bioluminescent bacterium in variably saturated, translucent quartz sand

Author keywords

Bacteria; Bioluminescence; Reactive transport; Unsaturated porous media

Indexed keywords

BIOLUMINESCENCE; COMPUTER SIMULATION; FLOW VISUALIZATION; POROUS MATERIALS; SAND; STEADY FLOW; TRANSPORT PROPERTIES;

EID: 34247109480     PISSN: 03091708     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.advwatres.2006.05.026     Document Type: Article
Times cited : (12)

References (39)
  • 2
    • 0030110876 scopus 로고    scopus 로고
    • Fate of dissolved tolulene during steady infiltration through unsaturated soil: I. method emphasizing chloroflorm as a volatile, sorptive, and recalcitrant tracer
    • Allen-King R.M., Gillham R.W., and Barker J.F. Fate of dissolved tolulene during steady infiltration through unsaturated soil: I. method emphasizing chloroflorm as a volatile, sorptive, and recalcitrant tracer. J Environ Qual 25 (1996) 279-286
    • (1996) J Environ Qual , vol.25 , pp. 279-286
    • Allen-King, R.M.1    Gillham, R.W.2    Barker, J.F.3
  • 3
    • 0030110972 scopus 로고    scopus 로고
    • Fate of dissolved tolulene during steady infiltration through unsaturated soil: II. Biotransformation under nutrient-limited conditions
    • Allen-King R.M., Gillham R.W., Barker J.F., and Sudicky E.A. Fate of dissolved tolulene during steady infiltration through unsaturated soil: II. Biotransformation under nutrient-limited conditions. J Environ Qual 25 (1996) 287-295
    • (1996) J Environ Qual , vol.25 , pp. 287-295
    • Allen-King, R.M.1    Gillham, R.W.2    Barker, J.F.3    Sudicky, E.A.4
  • 5
    • 0029160397 scopus 로고
    • Determination of effective transport coefficients for bacterial migration in sand columns
    • Barton J.W., and Ford R.M. Determination of effective transport coefficients for bacterial migration in sand columns. Appl Environ Microbiol 61 (1995) 3329-3335
    • (1995) Appl Environ Microbiol , vol.61 , pp. 3329-3335
    • Barton, J.W.1    Ford, R.M.2
  • 6
    • 84936620253 scopus 로고
    • Measurement of carbohydrates in soil hydrolyzates with anthrone
    • Brink R.H., Dubach P., and Lynch D.L. Measurement of carbohydrates in soil hydrolyzates with anthrone. Soil Sci 89 (1960) 157-166
    • (1960) Soil Sci , vol.89 , pp. 157-166
    • Brink, R.H.1    Dubach, P.2    Lynch, D.L.3
  • 7
    • 34247136585 scopus 로고    scopus 로고
    • Brooks RH, Corey AT. Hydraulic properties of porous media. Hydrol Paper 3, Colorado State University, Fort Collins, 1964.
  • 8
    • 0001572223 scopus 로고
    • Effect of entrapped air upon the permeability of soils
    • Christiansen J.E. Effect of entrapped air upon the permeability of soils. Soil Sci 58 (1944) 355-365
    • (1944) Soil Sci , vol.58 , pp. 355-365
    • Christiansen, J.E.1
  • 9
    • 0030031186 scopus 로고    scopus 로고
    • Experimental evidence of transport of pesticides through field soils - a review
    • Flury M. Experimental evidence of transport of pesticides through field soils - a review. J Environ Qual 25 (1996) 25-45
    • (1996) J Environ Qual , vol.25 , pp. 25-45
    • Flury, M.1
  • 10
    • 0036218398 scopus 로고    scopus 로고
    • Physical modeling of solute transport in porous media: evaluation of an imaging technique using UV excited fluorescent dye
    • Huang W.E., Smith C.C., Lerner D.N., Thornton S.F., and Oram A. Physical modeling of solute transport in porous media: evaluation of an imaging technique using UV excited fluorescent dye. Water Res 36 (2002) 1843-1853
    • (2002) Water Res , vol.36 , pp. 1843-1853
    • Huang, W.E.1    Smith, C.C.2    Lerner, D.N.3    Thornton, S.F.4    Oram, A.5
  • 11
    • 0345369695 scopus 로고    scopus 로고
    • Transport of Pseudomonas fluorescens through quartz sand columns as a function of water content
    • Jewett D.G., Logan B.E., Arnold R.G., and Bales R.C. Transport of Pseudomonas fluorescens through quartz sand columns as a function of water content. J Contam Hydrol 36 (1999) 73-89
    • (1999) J Contam Hydrol , vol.36 , pp. 73-89
    • Jewett, D.G.1    Logan, B.E.2    Arnold, R.G.3    Bales, R.C.4
  • 12
    • 0001418950 scopus 로고
    • Transport of chemicals through soils: Mechanisms, models, and field applications
    • Jury W.A., and Flühler H. Transport of chemicals through soils: Mechanisms, models, and field applications. Adv Agron (1992) 141-201
    • (1992) Adv Agron , pp. 141-201
    • Jury, W.A.1    Flühler, H.2
  • 13
    • 0034925533 scopus 로고    scopus 로고
    • Numerical analysis of biological clogging in two-dimensional sand box experiments
    • Kildsgaard J., and Engesgaard P. Numerical analysis of biological clogging in two-dimensional sand box experiments. J Contam Hydrol 50 (2001) 261-285
    • (2001) J Contam Hydrol , vol.50 , pp. 261-285
    • Kildsgaard, J.1    Engesgaard, P.2
  • 14
    • 0025112779 scopus 로고
    • Rapid, sensitive bioluminescent reporter technology for naphthalene exposure and biodegradation
    • King J.M.H., DiGrazia P.M., Applegate B.M., Burlage R.S., Sanseverino J., Dunbar P., et al. Rapid, sensitive bioluminescent reporter technology for naphthalene exposure and biodegradation. Science 249 (1990) 778-781
    • (1990) Science , vol.249 , pp. 778-781
    • King, J.M.H.1    DiGrazia, P.M.2    Applegate, B.M.3    Burlage, R.S.4    Sanseverino, J.5    Dunbar, P.6
  • 15
    • 0343618119 scopus 로고
    • Klute A., and Dirksen C. (Eds), Soil Sci Soc Am, Madison, Wisconsin
    • In: Klute A., and Dirksen C. (Eds). Methods of soil analysis - Part 2. Physical and mineralogical methods. Agronomy monograph 9 (1986), Soil Sci Soc Am, Madison, Wisconsin
    • (1986) Agronomy monograph , vol.9
  • 16
  • 17
    • 0034281797 scopus 로고    scopus 로고
    • Predicting the gas diffusion coefficient in repacked soil: water-induced linear reduction model
    • Moldrup P., Olesen T., Gamst J., Schjønning P., Yamaguchi T., and Rolston D.E. Predicting the gas diffusion coefficient in repacked soil: water-induced linear reduction model. Soil Sci Soc Am J 64 (2000) 1588-1594
    • (2000) Soil Sci Soc Am J , vol.64 , pp. 1588-1594
    • Moldrup, P.1    Olesen, T.2    Gamst, J.3    Schjønning, P.4    Yamaguchi, T.5    Rolston, D.E.6
  • 18
    • 0030616548 scopus 로고    scopus 로고
    • The influence of physical heterogeneity on microbial degradation and distribution in porous media
    • Murphy E.M., Ginn T.R., Chilakapati A., Resch C.T., Phillips J.L., Wietsma T.W., et al. The influence of physical heterogeneity on microbial degradation and distribution in porous media. Water Resour Res 33 (1997) 1087-1103
    • (1997) Water Resour Res , vol.33 , pp. 1087-1103
    • Murphy, E.M.1    Ginn, T.R.2    Chilakapati, A.3    Resch, C.T.4    Phillips, J.L.5    Wietsma, T.W.6
  • 19
    • 0032809575 scopus 로고    scopus 로고
    • Factors influencing expression of luxCDABE and nah genes in Pseudomonas putida RB1353 (NAH7, pUTK9) in dynamics systems
    • Neilson J.W., Pierce S.A., and Maier R.M. Factors influencing expression of luxCDABE and nah genes in Pseudomonas putida RB1353 (NAH7, pUTK9) in dynamics systems. Appl Environ Microbiol 65 (1999) 3473-3482
    • (1999) Appl Environ Microbiol , vol.65 , pp. 3473-3482
    • Neilson, J.W.1    Pierce, S.A.2    Maier, R.M.3
  • 20
    • 0035367155 scopus 로고    scopus 로고
    • A new method for quantification of liquid saturation in 2D translucent porous media systems using light transmission
    • Niemet M.R., and Selker J.S. A new method for quantification of liquid saturation in 2D translucent porous media systems using light transmission. Adv Water Resour 24 (2001) 651-666
    • (2001) Adv Water Resour , vol.24 , pp. 651-666
    • Niemet, M.R.1    Selker, J.S.2
  • 21
    • 0036702636 scopus 로고    scopus 로고
    • Relationships between gas-liquid interfacial surface area, liquid saturation, and light transmission in variably saturated porous media
    • 10.1029/2001WR000785
    • Niemet M.R., Rockhold M.L., Weisbrod N., and Selker J.S. Relationships between gas-liquid interfacial surface area, liquid saturation, and light transmission in variably saturated porous media. Water Resour Res 38 8 (2002) 10.1029/2001WR000785
    • (2002) Water Resour Res , vol.38 , Issue.8
    • Niemet, M.R.1    Rockhold, M.L.2    Weisbrod, N.3    Selker, J.S.4
  • 22
    • 0031692551 scopus 로고    scopus 로고
    • Water saturation and surfactant effects on bacterial transport in sand columns
    • Powelson D.K., and Mills A.L. Water saturation and surfactant effects on bacterial transport in sand columns. Soil Sci 163 (1998) 694-704
    • (1998) Soil Sci , vol.163 , pp. 694-704
    • Powelson, D.K.1    Mills, A.L.2
  • 23
    • 0016949852 scopus 로고
    • Trajectory analysis of deep-bed filtration with the sphere-in-cell porous media model
    • Rajagopalan R., and Tien C. Trajectory analysis of deep-bed filtration with the sphere-in-cell porous media model. AIChE J 3 (1976) 523-533
    • (1976) AIChE J , vol.3 , pp. 523-533
    • Rajagopalan, R.1    Tien, C.2
  • 25
    • 0029656615 scopus 로고    scopus 로고
    • Application of similar media scaling and conditional simulation for modeling water flow and tritium transport at the Las Cruces Trench Site
    • Rockhold M.L., Rossi R.E., and Hills R.G. Application of similar media scaling and conditional simulation for modeling water flow and tritium transport at the Las Cruces Trench Site. Water Resour Res 32 (1996) 595-609
    • (1996) Water Resour Res , vol.32 , pp. 595-609
    • Rockhold, M.L.1    Rossi, R.E.2    Hills, R.G.3
  • 26
    • 0030618863 scopus 로고    scopus 로고
    • An analytical solution technique for one-dimensional, steady vertical water flow in layered soils
    • Rockhold M.L., Simmons C.S., and Fayer M.J. An analytical solution technique for one-dimensional, steady vertical water flow in layered soils. Water Resour Res 33 (1997) 897-902
    • (1997) Water Resour Res , vol.33 , pp. 897-902
    • Rockhold, M.L.1    Simmons, C.S.2    Fayer, M.J.3
  • 27
    • 0036563509 scopus 로고    scopus 로고
    • Considerations for modeling bacterial-induced changes in hydraulic properties of variably saturated porous media
    • Rockhold M.L., Yarwood R.R., Niemet M.R., Bottomley P.J., and Selker J.S. Considerations for modeling bacterial-induced changes in hydraulic properties of variably saturated porous media. Adv Water Resour 25 (2002) 477-495
    • (2002) Adv Water Resour , vol.25 , pp. 477-495
    • Rockhold, M.L.1    Yarwood, R.R.2    Niemet, M.R.3    Bottomley, P.J.4    Selker, J.S.5
  • 28
    • 28244498244 scopus 로고    scopus 로고
    • Coupled microbial and transport processes in soils
    • Rockhold M.L., Yarwood R.R., and Selker J.S. Coupled microbial and transport processes in soils. Vadose Zone J 3 (2004) 368-383
    • (2004) Vadose Zone J , vol.3 , pp. 368-383
    • Rockhold, M.L.1    Yarwood, R.R.2    Selker, J.S.3
  • 29
    • 34247122574 scopus 로고    scopus 로고
    • Experimental observations and numerical modeling of coupled microbial and transport processes in variably saturated sand
    • Rockhold M.L., Yarwood R.R., Niemet M.R., Bottomley P.J., and Selker J.S. Experimental observations and numerical modeling of coupled microbial and transport processes in variably saturated sand. Vadose Zone J 4 (2005) 407-471
    • (2005) Vadose Zone J , vol.4 , pp. 407-471
    • Rockhold, M.L.1    Yarwood, R.R.2    Niemet, M.R.3    Bottomley, P.J.4    Selker, J.S.5
  • 30
    • 0003324443 scopus 로고
    • Spreading on liquids: effect of surface tension sinks on the behavior of stagnant liquid layers
    • Schrader M.E., and Loeb G.I. (Eds), Plenum Press, New York
    • Ruckenstein E., Suciu D.G., and Smigelschi O. Spreading on liquids: effect of surface tension sinks on the behavior of stagnant liquid layers. In: Schrader M.E., and Loeb G.I. (Eds). Modern approaches to wettability - theory and applications (1992), Plenum Press, New York 97-422
    • (1992) Modern approaches to wettability - theory and applications , pp. 97-422
    • Ruckenstein, E.1    Suciu, D.G.2    Smigelschi, O.3
  • 32
    • 0030301849 scopus 로고    scopus 로고
    • Characterization of Miller-similar sands for laboratory hydrologic studies
    • Schroth M.H., Ahearn S.J., Selker J.S., and Istok J.D. Characterization of Miller-similar sands for laboratory hydrologic studies. Soil Sci Soc Am J 60 (1996) 1331-1339
    • (1996) Soil Sci Soc Am J , vol.60 , pp. 1331-1339
    • Schroth, M.H.1    Ahearn, S.J.2    Selker, J.S.3    Istok, J.D.4
  • 34
    • 0027045145 scopus 로고
    • Transport of bacteria during unsteady unsaturated soil water flow
    • Tan Y.W., Bond J., and Griffin D.M. Transport of bacteria during unsteady unsaturated soil water flow. Soil Sci Soc Am J 56 (1992) 1331-1340
    • (1992) Soil Sci Soc Am J , vol.56 , pp. 1331-1340
    • Tan, Y.W.1    Bond, J.2    Griffin, D.M.3
  • 35
    • 0035169330 scopus 로고    scopus 로고
    • A model that uses the induction phase of lux-gene dependent bioluminescence in Pseudomonas fluorescens HK44 to quantify cell density in translucent porous media
    • Uesugi S.L., Yarwood R.R., Selker J.S., and Bottomley P.J. A model that uses the induction phase of lux-gene dependent bioluminescence in Pseudomonas fluorescens HK44 to quantify cell density in translucent porous media. J Microbiol Meth 47 (2001) 317-324
    • (2001) J Microbiol Meth , vol.47 , pp. 317-324
    • Uesugi, S.L.1    Yarwood, R.R.2    Selker, J.S.3    Bottomley, P.J.4
  • 36
    • 34247117601 scopus 로고    scopus 로고
    • US Department of Energy. The DOE complex-wide vadose zone science and technology roadmap: characterization, monitoring, and simulation of subsurface contaminant fate and transport. Idaho Falls National Engineering and Environmental Laboratory, Idaho Falls, ID, 2000.
  • 37
    • 0028089351 scopus 로고
    • Influence of gas-water interface on transport of microorganisms through unsaturated porous media
    • Wan J., Wilson J.L., and Kieft T.L. Influence of gas-water interface on transport of microorganisms through unsaturated porous media. Appl Environ Microbiol 60 (1994) 509-516
    • (1994) Appl Environ Microbiol , vol.60 , pp. 509-516
    • Wan, J.1    Wilson, J.L.2    Kieft, T.L.3
  • 38
    • 0041660992 scopus 로고    scopus 로고
    • Light transmission technique for the evaluation of colloidal transport and dynamics in porous media
    • Weisbrod N., Niemet M.R., and Selker J.S. Light transmission technique for the evaluation of colloidal transport and dynamics in porous media. Environ Sci Technol 37 (2003) 3694-3700
    • (2003) Environ Sci Technol , vol.37 , pp. 3694-3700
    • Weisbrod, N.1    Niemet, M.R.2    Selker, J.S.3
  • 39
    • 0036301094 scopus 로고    scopus 로고
    • Bioluminescence as a nondestructive measure of microbial cell density and distribution in unsaturated porous media
    • Yarwood R.R., Rockhold M.L., Niemet M.R., Selker J.S., and Bottomley P.J. Bioluminescence as a nondestructive measure of microbial cell density and distribution in unsaturated porous media. Appl Environ Microbiol 68 (2002) 3597-3605
    • (2002) Appl Environ Microbiol , vol.68 , pp. 3597-3605
    • Yarwood, R.R.1    Rockhold, M.L.2    Niemet, M.R.3    Selker, J.S.4    Bottomley, P.J.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.