메뉴 건너뛰기




Volumn 24, Issue 2, 2006, Pages 169-184

TaqMan real-time PCR versus four conventional PCR assays for detection of apple proliferation phytoplasma

Author keywords

Diagnosis; Malus domestica; PCR inhibition; TaqMan real time PCR; Test sensitivity; Test specificity

Indexed keywords

CANDIDATUS PHYTOPLASMA; CANDIDATUS PHYTOPLASMA MALI; MALUS X DOMESTICA;

EID: 34147166603     PISSN: 07359640     EISSN: None     Source Type: Journal    
DOI: 10.1007/BF02914056     Document Type: Review
Times cited : (37)

References (34)
  • 1
    • 0001314701 scopus 로고
    • Detection of DNA of plant pathogenic mycoplasmalike organisms by a polymerase chain reaction that amplifies a sequence of the 16S rRNA gene
    • Ahrens U and Seemüller E (1992) Detection of DNA of plant pathogenic mycoplasmalike organisms by a polymerase chain reaction that amplifies a sequence of the 16S rRNA gene. Phytopathology 82: 828-832.
    • (1992) Phytopathology , vol.82 , pp. 828-832
    • Ahrens, U.1    Seemüller, E.2
  • 2
    • 1542315365 scopus 로고    scopus 로고
    • A new approach to apple proliferation detection: A highly sensitive real-time PCR assay
    • Baric S and Dalla Via J (2004) A new approach to apple proliferation detection: a highly sensitive real-time PCR assay. J Microbiol Meth 57: 135-145.
    • (2004) J Microbiol Meth , vol.57 , pp. 135-145
    • Baric, S.1    Dalla Via, J.2
  • 3
    • 33646484714 scopus 로고    scopus 로고
    • Diagnostics of apple proliferation phytoplasma hampered by bacterial DNAs
    • Baric S and Dalla Via J (2005) Diagnostics of apple proliferation phytoplasma hampered by bacterial DNAs. Laimburg Journal 2: 27-33.
    • (2005) Laimburg Journal , vol.2 , pp. 27-33
    • Baric, S.1    Dalla Via, J.2
  • 4
    • 0142102434 scopus 로고    scopus 로고
    • Detection of apple proliferation phytoplasma by ELISA and PCR in growing and dormant apple trees
    • Brzin J, Ermacora P, Osler R, Loi N, Ravnikar M and Petrovic N (2003) Detection of apple proliferation phytoplasma by ELISA and PCR in growing and dormant apple trees. J Plant Dis Prot 110: 476-483.
    • (2003) J Plant Dis Prot , vol.110 , pp. 476-483
    • Brzin, J.1    Ermacora, P.2    Osler, R.3    Loi, N.4    Ravnikar, M.5    Petrovic, N.6
  • 5
    • 4444313743 scopus 로고    scopus 로고
    • The recovery phenomenon in apple proliferation-infected apple trees
    • Carraro L, Ermacora P, Loi N and Osler R (2004) The recovery phenomenon in apple proliferation-infected apple trees. J Plant Path 86: 141-146.
    • (2004) J Plant Path , vol.86 , pp. 141-146
    • Carraro, L.1    Ermacora, P.2    Loi, N.3    Osler, R.4
  • 6
    • 0025902153 scopus 로고
    • Amplification of 16S rRNA genes from culturable and nonculturable Mollicutes
    • Deng S and Hiruki C (1991) Amplification of 16S rRNA genes from culturable and nonculturable Mollicutes. J Microbiol Meth 14: 53-61.
    • (1991) J Microbiol Meth , vol.14 , pp. 53-61
    • Deng, S.1    Hiruki, C.2
  • 7
    • 34147117660 scopus 로고    scopus 로고
    • EPPO (2004) EPPO Standards. EPPO A1 and A2 Lists of pests recommended for regulation as quarantine pests. PM 1/2(13). European and Mediterranean Plant Protection Organization. Paris, France, Online Resources.
    • EPPO (2004) EPPO Standards. EPPO A1 and A2 Lists of pests recommended for regulation as quarantine pests. PM 1/2(13). European and Mediterranean Plant Protection Organization. Paris, France, Online Resources.
  • 8
    • 0036766992 scopus 로고    scopus 로고
    • Seasonal variations in detection and transmission of pear decline phytoplasma
    • Errea P, Aguelo V and Hormaza JI (2002) Seasonal variations in detection and transmission of pear decline phytoplasma. J Phytopathol 150: 439-443.
    • (2002) J Phytopathol , vol.150 , pp. 439-443
    • Errea, P.1    Aguelo, V.2    Hormaza, J.I.3
  • 9
    • 0033832385 scopus 로고    scopus 로고
    • Cacopsylla costalis (Flor 1861), as a vector of apple proliferation in Trentino
    • Frisinghelli C, Delaiti L, Grando MS, Forti D and Vindimian ME (2000) Cacopsylla costalis (Flor 1861), as a vector of apple proliferation in Trentino. J Phytopathol 148: 425-431.
    • (2000) J Phytopathol , vol.148 , pp. 425-431
    • Frisinghelli, C.1    Delaiti, L.2    Grando, M.S.3    Forti, D.4    Vindimian, M.E.5
  • 10
    • 0032954326 scopus 로고    scopus 로고
    • Easy and efficient DNA extraction from woody plants for the detection of phytoplasmas by polymerase chain reaction
    • Green MJ, Thompson DA and MacKenzie DJ (1999) Easy and efficient DNA extraction from woody plants for the detection of phytoplasmas by polymerase chain reaction. Plant Dis 83: 482-485.
    • (1999) Plant Dis , vol.83 , pp. 482-485
    • Green, M.J.1    Thompson, D.A.2    MacKenzie, D.J.3
  • 11
    • 0000621566 scopus 로고    scopus 로고
    • Ultrasensitive detection of phytoplasmas by nested-PCR assays using two universal primer pairs
    • Gundersen DE and Lee IM (1996) Ultrasensitive detection of phytoplasmas by nested-PCR assays using two universal primer pairs. Phytopathol Mediter 35: 144-151.
    • (1996) Phytopathol Mediter , vol.35 , pp. 144-151
    • Gundersen, D.E.1    Lee, I.M.2
  • 12
    • 0005799994 scopus 로고    scopus 로고
    • Heinrich M, Botti S, Caprara L, Arthofer W, Strommer S, Hanzer V, Katinger H, Bertaccini A and Laimer da Câmara Machado M (2001) Improved detection methods for fruit tree phytoplasmas. Plant Mol Biol Rep 19: 169-179.
    • Heinrich M, Botti S, Caprara L, Arthofer W, Strommer S, Hanzer V, Katinger H, Bertaccini A and Laimer da Câmara Machado M (2001) Improved detection methods for fruit tree phytoplasmas. Plant Mol Biol Rep 19: 169-179.
  • 13
    • 34147134469 scopus 로고    scopus 로고
    • Applying modern diagnostics to plant disease control
    • Hollomon D (2003) Applying modern diagnostics to plant disease control. Ann Rev Plant Path 2: 287-297.
    • (2003) Ann Rev Plant Path , vol.2 , pp. 287-297
    • Hollomon, D.1
  • 14
    • 0028105844 scopus 로고
    • Differentiation of mycoplasmalike organisms (MLOs) in European fruit trees by PCR using specific primers derived from the sequence of a chromosomal fragment of the apple proliferation MLO
    • Jarausch W, Saillard C, Dosba F and Bove JM (1994) Differentiation of mycoplasmalike organisms (MLOs) in European fruit trees by PCR using specific primers derived from the sequence of a chromosomal fragment of the apple proliferation MLO. Appl Environ Microbiol 60: 2916-2923.
    • (1994) Appl Environ Microbiol , vol.60 , pp. 2916-2923
    • Jarausch, W.1    Saillard, C.2    Dosba, F.3    Bove, J.M.4
  • 15
    • 0034105757 scopus 로고    scopus 로고
    • Genetic variability of apple proliferation phytoplasmas as determined by PCR-RFLP and sequencing of a non-ribosomal fragment
    • Jarausch W, Saillard C, Helliot B, Garnier M and Dosba F (2000) Genetic variability of apple proliferation phytoplasmas as determined by PCR-RFLP and sequencing of a non-ribosomal fragment. Mol Cell Probes 14: 17-24.
    • (2000) Mol Cell Probes , vol.14 , pp. 17-24
    • Jarausch, W.1    Saillard, C.2    Helliot, B.3    Garnier, M.4    Dosba, F.5
  • 16
    • 0035595430 scopus 로고    scopus 로고
    • Magnetic capture hybridisation for improved PCR detection of Nectria galligena from lignified apple extracts
    • Langrell SRH and Barbara DJ (2001) Magnetic capture hybridisation for improved PCR detection of Nectria galligena from lignified apple extracts. Plant Mol Biol Rep 19: 5-11.
    • (2001) Plant Mol Biol Rep , vol.19 , pp. 5-11
    • Langrell, S.R.H.1    Barbara, D.J.2
  • 17
    • 0001365577 scopus 로고
    • Universal amplification and analysis of pathogen 16S rDNA for classification and identification of mycoplasmalike organisms
    • Lee IM, Hammond RW, Davis RE and Gundersen DE (1993) Universal amplification and analysis of pathogen 16S rDNA for classification and identification of mycoplasmalike organisms. Phytopathology 83: 834-842.
    • (1993) Phytopathology , vol.83 , pp. 834-842
    • Lee, I.M.1    Hammond, R.W.2    Davis, R.E.3    Gundersen, D.E.4
  • 18
    • 0028852323 scopus 로고
    • Detection of multiple phytoplasmas in perennial fruit trees with decline symptoms in Italy
    • Lee IM, Bertaccini A, Vibio M and Gundersen DE (1995) Detection of multiple phytoplasmas in perennial fruit trees with decline symptoms in Italy. Phytopathology 85: 728-735.
    • (1995) Phytopathology , vol.85 , pp. 728-735
    • Lee, I.M.1    Bertaccini, A.2    Vibio, M.3    Gundersen, D.E.4
  • 19
    • 0028794467 scopus 로고
    • Detection of the apple proliferation and pear decline phytoplasmas by PCR amplification of ribosomal and nonribosomal DNA
    • Lorenz KH, Schneider B, Ahrens U and Seemüller E (1995) Detection of the apple proliferation and pear decline phytoplasmas by PCR amplification of ribosomal and nonribosomal DNA. Phytopathology 85: 771-776.
    • (1995) Phytopathology , vol.85 , pp. 771-776
    • Lorenz, K.H.1    Schneider, B.2    Ahrens, U.3    Seemüller, E.4
  • 20
    • 1642318064 scopus 로고    scopus 로고
    • Real-time PCR in the microbiology laboratory
    • Mackay IM (2004) Real-time PCR in the microbiology laboratory. Clin Microbiol Infect 10: 190-212.
    • (2004) Clin Microbiol Infect , vol.10 , pp. 190-212
    • Mackay, I.M.1
  • 22
    • 0029108726 scopus 로고
    • Detection of the German grapevine yellows (Vergilbungskrankheit) MLO in grapevine, alternative hosts and a vector by a specific PCR procedure
    • Maixner M, Ahrens U and Seemüller E (1995) Detection of the German grapevine yellows (Vergilbungskrankheit) MLO in grapevine, alternative hosts and a vector by a specific PCR procedure. Eur J Plant Path 101: 241-250.
    • (1995) Eur J Plant Path , vol.101 , pp. 241-250
    • Maixner, M.1    Ahrens, U.2    Seemüller, E.3
  • 23
    • 0033642398 scopus 로고    scopus 로고
    • Histopathology and polyphenol content in plants infected by phytoplasmas
    • Musetti R, Favali MA and Pressacco L (2000) Histopathology and polyphenol content in plants infected by phytoplasmas. Cytobios 102: 133-147.
    • (2000) Cytobios , vol.102 , pp. 133-147
    • Musetti, R.1    Favali, M.A.2    Pressacco, L.3
  • 24
    • 34147126344 scopus 로고    scopus 로고
    • NAPPO (2004) NAPPO Regional Standards for Phytosanitary Measures (RSPM). RSPM No.25. Guidelines for international movement of pome and stone fruit trees into a NAPPO member country. Part 1: Viruses and virus-like pests, viroids, phytoplasmas and Xylella fastidiosa. North American Plant Protection Organization. Ottawa, Canada, Online Resources.
    • NAPPO (2004) NAPPO Regional Standards for Phytosanitary Measures (RSPM). RSPM No.25. Guidelines for international movement of pome and stone fruit trees into a NAPPO member country. Part 1: Viruses and virus-like pests, viroids, phytoplasmas and Xylella fastidiosa. North American Plant Protection Organization. Ottawa, Canada, Online Resources.
  • 25
    • 0002401070 scopus 로고    scopus 로고
    • Immunoenzymatic detection of PCR products for the identification of phytoplasmas in plants
    • Poggi Pollini C, Giunchedi L and Bissani R (1997) Immunoenzymatic detection of PCR products for the identification of phytoplasmas in plants. J Phytopathol 145: 371-374.
    • (1997) J Phytopathol , vol.145 , pp. 371-374
    • Poggi Pollini, C.1    Giunchedi, L.2    Bissani, R.3
  • 27
    • 0036759015 scopus 로고    scopus 로고
    • Real-time PCR and its application for rapid plant disease diagnostics
    • Schaad NW and Frederick RD (2002) Real-time PCR and its application for rapid plant disease diagnostics. Can J Plant Path 24: 250-258.
    • (2002) Can J Plant Path , vol.24 , pp. 250-258
    • Schaad, N.W.1    Frederick, R.D.2
  • 28
    • 0001616773 scopus 로고
    • Seasonal variation in the colonization patterns of mycoplasmalike organisms associated with apple proliferation and pear decline
    • Seemüller E, Schaper U and Zimbelmann F (1984) Seasonal variation in the colonization patterns of mycoplasmalike organisms associated with apple proliferation and pear decline. J Plant Dis Prot 91: 371-382.
    • (1984) J Plant Dis Prot , vol.91 , pp. 371-382
    • Seemüller, E.1    Schaper, U.2    Zimbelmann, F.3
  • 29
    • 0031667637 scopus 로고    scopus 로고
    • On the geographic distribution and prevalence of the apple proliferation phytoplasma in low-intensity orchards in Germany
    • Seemüller E, Kison H and Lorenz KH (1998a) On the geographic distribution and prevalence of the apple proliferation phytoplasma in low-intensity orchards in Germany. J Plant Dis Prot 105: 404-410.
    • (1998) J Plant Dis Prot , vol.105 , pp. 404-410
    • Seemüller, E.1    Kison, H.2    Lorenz, K.H.3
  • 30
    • 34147143384 scopus 로고    scopus 로고
    • Seemüller E, Kison H, Lorenz KH, Schneider B, Marcone C, Smart CD and Kirkpatrick B (1998b) Detection and identification of fruit tree phytoplasmas by PCR amplification of ribosomal and nonribosomal DNA. In: Manceau C and Spak J (eds), COST 823: New technologies to improve phytodiagnosis. Advances in the detection of plant pathogens by polymerase chain reaction, pp 56-66, Office of the Official Publication of the European Community, Luxembourg.
    • Seemüller E, Kison H, Lorenz KH, Schneider B, Marcone C, Smart CD and Kirkpatrick B (1998b) Detection and identification of fruit tree phytoplasmas by PCR amplification of ribosomal and nonribosomal DNA. In: Manceau C and Spak J (eds), COST 823: New technologies to improve phytodiagnosis. Advances in the detection of plant pathogens by polymerase chain reaction, pp 56-66, Office of the Official Publication of the European Community, Luxembourg.
  • 31
    • 0141589465 scopus 로고    scopus 로고
    • Mycoplasmas of plants and insects
    • Razin S and Herrmann R eds, Kluver Academic/Plenum Publishers, New York
    • Seemüller E, Garnier M and Schneider B (2002) Mycoplasmas of plants and insects. In: Razin S and Herrmann R (eds), Molecular Biology and Pathogenicity of Mycoplasmas, pp 91-115, Kluver Academic/Plenum Publishers, New York.
    • (2002) Molecular Biology and Pathogenicity of Mycoplasmas , pp. 91-115
    • Seemüller, E.1    Garnier, M.2    Schneider, B.3
  • 33
    • 1542647149 scopus 로고    scopus 로고
    • Transmission of apple proliferation phytoplasma by Cacopsylla melanoneura (Homoptera: Psyllidae)
    • Tedeschi R and Alma A (2004) Transmission of apple proliferation phytoplasma by Cacopsylla melanoneura (Homoptera: Psyllidae). J Econ Entom 97: 8-13.
    • (2004) J Econ Entom , vol.97 , pp. 8-13
    • Tedeschi, R.1    Alma, A.2
  • 34
    • 0032722270 scopus 로고    scopus 로고
    • An assessment of nested PCR to detect phytoplasmas in imported dormant buds and internodal tissues of quarantined tree fruit germ plasm
    • Waterworth HE and Mock R (1999) An assessment of nested PCR to detect phytoplasmas in imported dormant buds and internodal tissues of quarantined tree fruit germ plasm. Plant Dis 83: 1047-1050.
    • (1999) Plant Dis , vol.83 , pp. 1047-1050
    • Waterworth, H.E.1    Mock, R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.