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Volumn 92, Issue 7, 2007, Pages

Acceptable protein and solvent behavior in primary hydration shell simulations of hen lysozyme

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; AMMONIA; ASPARAGINE; GLUTAMINE; LYSOZYME;

EID: 34047211305     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1529/biophysj.106.103010     Document Type: Article
Times cited : (15)

References (14)
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  • 3
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  • 4
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    • Im, W.1    Lee, M.S.2    Brooks, C.L.3
  • 5
    • 0028854127 scopus 로고
    • Dominant solvation effects from primary shell of hydration: Approximation for molecular dynamics simulations
    • Beglov, D., and B. Roux. 1994. Dominant solvation effects from primary shell of hydration: approximation for molecular dynamics simulations. Biopolymers. 35:171-178.
    • (1994) Biopolymers , vol.35 , pp. 171-178
    • Beglov, D.1    Roux, B.2
  • 6
    • 0001450853 scopus 로고    scopus 로고
    • Solvation in simulated annealing and high-temperature molecular dynamics of proteins: A restrained water droplet model
    • Sankararamakrishnan, R., K. Konvicka, E. L. Mehler, and H. Weinstein. 2000. Solvation in simulated annealing and high-temperature molecular dynamics of proteins: a restrained water droplet model. Int. J. Quantum Chem. 77:174-186.
    • (2000) Int. J. Quantum Chem , vol.77 , pp. 174-186
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  • 7
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    • Hydrated myoglobin's anharmonic fluctuations are not primarily due to dihedral transitions
    • Steinbach, P. J., and B. R. Brooks. 1996. Hydrated myoglobin's anharmonic fluctuations are not primarily due to dihedral transitions. Proc. Natl. Acad. Sci. USA. 93:55-59.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 55-59
    • Steinbach, P.J.1    Brooks, B.R.2
  • 8
    • 0344603605 scopus 로고    scopus 로고
    • Towards molecular dynamics simulation of large proteins with a hydration shell at constant pressure
    • Lounnas, V., S. K. Ludemann, and R. C. Wade. 1999. Towards molecular dynamics simulation of large proteins with a hydration shell at constant pressure. Biophys. Chem. 78:157-182.
    • (1999) Biophys. Chem , vol.78 , pp. 157-182
    • Lounnas, V.1    Ludemann, S.K.2    Wade, R.C.3
  • 9
    • 15744363770 scopus 로고    scopus 로고
    • Evaluation of Poisson solvation models using a hybrid explicit/implicit solvent method
    • Lee, M. S., and M. A. Olson. 2005. Evaluation of Poisson solvation models using a hybrid explicit/implicit solvent method. J. Phys. Chem. B. 109:5223-5236.
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  • 10
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    • Application of the primary hydration shell approach to locally enhanced sampling simulated annealing: Computer simulation of thyrotropin-releasing hormone in water
    • Rosenhouse-Dantsker, A., and R. Osman. 2000. Application of the primary hydration shell approach to locally enhanced sampling simulated annealing: computer simulation of thyrotropin-releasing hormone in water. Biophys. J. 79:66-79.
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    • Rosenhouse-Dantsker, A.1    Osman, R.2
  • 12
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    • Importance of the CMAP correction to the CHARMM22 protein force field: Dynamics of hen lysozyme
    • Buck, M., S. Bouguet-Bonnet, R. W. Pastor, and A. D. MacKerell Jr. 2006. Importance of the CMAP correction to the CHARMM22 protein force field: dynamics of hen lysozyme. Biophys. J. 90:L36-L38.
    • (2006) Biophys. J , vol.90
    • Buck, M.1    Bouguet-Bonnet, S.2    Pastor, R.W.3    MacKerell Jr., A.D.4
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* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.