SBaddon: High performance simulation for the Systems Biology Toolbox for MATLAB

Bioinformatics

Volumn 23, Issue 5, 2007, Pages 646-647

  Schmidt, Henning ^a  

^a FRAUNHOFER CHALMERS CENTRE   (Sweden)

Author keywords

[No Author keywords available]

Indexed keywords

ACCESS TO INFORMATION; ALGORITHM; ARTICLE; AUTOMATION; BIOINFORMATICS; COMPUTER PROGRAM; COMPUTER SIMULATION; INTERNET; PRIORITY JOURNAL; PROCESS OPTIMIZATION; SENSITIVITY ANALYSIS; SYSTEMS BIOLOGY;

EID: 34047103529     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/btl668     Document Type: Article

References (6)

1. Hucka,M. et al. (2001) The ERATO systems biology workbench: An integrated environment for multiscale and multitheoretic simulations in systems biology. In Foundations in System Biology. MIT Press, http://sbw.kgi.edu.
2. Hynne,F. et al. (2001) Full-scale model of glycolysis in Saccharomyces cerevisiae. Biophysical Chemistry, 94, 121-163.
3. Novak,B. and Tyson,J.J. (1993) Modeling the cell division cycle: M-phase trigger, oscillations and size control. J. Theoretical Biology, 165, 101-134.
4. Runarsson,T.P. and Yao,X. (2005) Search Biases in Constrained Evolutionary Optimization. IEEE Trans SystMan Cybernetics Part C: Appl Rev, 35, 233-243.
5. Schmidt,H. and Jirstrand,M. (2006) Systems Biology Toolbox for MATLAB: A computational platform for research in Systems Biology. Bioinformatics, 22, 514-515, http://www.sbtoolbox.org.
6. Serban,R. and Hindmarsh,A.C. (2005) CVODES: The sensitivity-enabled ode solver in SUNDIALS. In Proceedings of IDETC/CIE 2005. Long Beach, CA.