SKY analysis of childhood neural tumors and cell lines demonstrates a susceptibility of aberrant chromosomes to further rearrangements

Cancer Letters

Volumn 250, Issue 1, 2007, Pages 47-52

  Stanchescu, Racheli ^a   Betts, David R ^b   Yekutieli, Daniel ^c   Ambros, Peter ^d   Cohen, Ninette ^a   Rechavi, Gideon ^a   Amariglio, Ninette ^a   Trakhtenbrot, Luba ^a  

^a Edmond and Lily Safra Children's Hospital   (Israel)

^b UNIVERSITY CHILDREN S HOSPITAL   (Switzerland)

^c TEL AVIV UNIVERSITY   (Israel)

^d ST ANNA CHILDREN S HOSPITAL   (Austria)

Author keywords

Additional rearrangements; Neural tumors; Spectral karyotyping

Indexed keywords

ARTICLE; CANCER CELL CULTURE; CHILDHOOD CANCER; CHROMOSOMAL INSTABILITY; CHROMOSOME ABERRATION; CHROMOSOME REARRANGEMENT; CONTROLLED STUDY; GENETIC SUSCEPTIBILITY; HUMAN; HUMAN CELL; NERVE TUMOR; PRIORITY JOURNAL; SOLID TUMOR; SPECTRAL KARYOTYPING;

ANEUPLOIDY; CELL LINE, TUMOR; CHILD; CHROMOSOMAL INSTABILITY; CHROMOSOME ABERRATIONS; CHROMOSOME BANDING; CHROMOSOMES, HUMAN; DISEASE SUSCEPTIBILITY; HUMANS; NERVOUS SYSTEM NEOPLASMS; SPECTRAL KARYOTYPING; TRANSLOCATION, GENETIC; TUMOR CELLS, CULTURED;

EID: 33947712211     PISSN: 03043835     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.canlet.2006.09.015     Document Type: Article

References (24)

1. Frigyesi A., Gisselsson D., Mitelman F., and Hoglund M. Power law distribution of chromosome aberrations in cancer. Cancer Res. 63 (2003) 7094-7097
2. Hoglund M., Jin C., Gisselsson D., Hansen G.B., Mitelman F., and Mertens F. Statistical analyses of karyotypic complexity in head and neck squamous cell carcinoma. Cancer Genet. Cytogenet. 150 (2004) 1-8
3. Hoglund M., Sehn L., Connors J.M., Gascoyne R.D., Siebert R., Sall T., Mitelman F., and Horsman D.E. Identification of cytogenetic subgroups and karyotypic pathways of clonal evolution in follicular lymphomas. Genes Chromosomes Cancer 39 (2004) 195-204
4. Gisselsson D., and Hoglund M. Connecting mitotic instability and chromosome aberrations in cancer - can telomeres bridge the gap?. Semin. Cancer Biol. 15 (2005) 13-23
5. Hoglund M., Frigyesi A., Sall T., Gisselsson D., and Mitelman F. Statistical behavior of complex cancer karyotypes. Genes Chromosomes Cancer 42 (2005) 327-341
6. Hjelm M., Hoglund M., and Lagergren J. New probabilistic network models and algorithms for oncogenesis. J. Comput. Biol. 13 (2006) 853-865
7. Schrock E., du Manoir S., Veldman T., Schoell B., Wienberg J., Ferguson-Smith M.A., Ning Y., Ledbetter D.H., Bar-Am I., Soenksen D., Garini Y., and Ried T. Multicolor spectral karyotyping of human chromosomes. Science 273 (1996) 494-497
8. Bayani J., and Squire J.A. Advances in the detection of chromosomal aberrations using spectral karyotyping. Clin. Genet. 59 (2001) 65-73 Review
9. Bayani J., Brenton J.D., Macgregor P.F., Beheshti B., Albert M., Nallainathan D., Karaskova J., Rosen B., Murphy J., Laframboise S., Zanke B., and Squire J.A. Parallel analysis of sporadic primary ovarian carcinomas by spectral karyotyping, comparative genomic hybridization, and expression microarrays. Cancer Res. 62 (2002) 3466-3476
10. Bayani J., Zielenska M., Pandita A., Al-Romaih K., Karaskova J., Harrison K., Bridge J.A., Sorensen P., Thorner P., and Squire J.A. Spectral karyotyping identifies recurrent complex rearrangements of chromosomes 8, 17, and 20 in osteosarcomas. Genes Chromosomes Cancer 36 (2003) 7-16
11. Betts D.R., Cohen N., Leibundgut K.E., Kühne T., Caflisch U., Greiner J., Trakhtenbrot L., and Niggli F.K. Characterization of karyotypic events and evolution in neuroblastoma. Pediatr. Blood Cancer 44 (2005) 147-157
12. Cohen N., Betts D.R., Trakhtenbrot L., Niggli F.K., Amariglio N., Brok-Simoni F., Rechavi G., and Meitar D. Detection of unidentified chromosome abnormalities in human neuroblastoma by spectral karyotyping (SKY). Genes Chromosomes Cancer 31 (2001) 201-208
13. Cohen N., Betts D.R., Tavori U., Toren A., Ram T., Constantini S., Grotzer M.A., Amariglio N., Rechavi G., and Trakhtenbrot L. Karyotypic evolution pathways in medulloblastoma/primitive neuroectodermal tumor determined with a combination of spectral karyotyping, G-banding, and fluorescence in situ hybridization. Cancer Genet Cytogenet. 149 (2004) 44-52
14. Betts D.R., Koesters R., Pluss H.J., and Niggli F.K. Routine karyotyping in Wilms tumor. Cancer Genet. Cytogenet. 96 (1997) 151-156
15. Cohen N., Betts D.R., Rechavi G., Amariglio N., and Trakhtenbrot L. Clonal expansion and not cell interconversion is the basis for the neuroblast and nonneuronal types of the SK-N-SH neuroblastoma cell lines. Cancer Genet. Cytogenet. 143 (2003) 80-84
16. Cremer T., and Cremer C. Chromosome territories, nuclear architecture and gene regulation in mammalian cells. Nut. Rev. Genet. 2 (2001) 292-301
17. Labrador M., and Corces V.G. Setting the boundaries of chromatin domains and nuclear organization. Cell 111 (2002) 151-154 Review
18. Marshall W.F. Order and disorder in the nucleus. Cur. Biol. 12 (2002) R185-R192 Review
19. Aten J.A., and Kanaar R. Chromosomal organization: mingling with the neighbors. PLoS Biol. 4 (2006) 686-689
20. O'Brien T.P., Bult C.J., Cremer C., Grunze M., Knowles B.B., Langowski J., McNally J., Pederson T., Politz J.C., Pombo A., Schmahl G., Spatz J.P., and van Driel R. Genome function and nuclear architecture: from gene expression to nanoscience. Genome Res. 13 (2003) 1029-1041 Review
21. Tsafrir D., Bacolod M., Selvanayagam Z., Tsafrir I., Shia J., Zeng Z., Liu H., Krier C., Stengel R.F., Barany F., Gerald W.L., Paty P.B., Domany E., and Notterman D.A. Relationship of gene expression and chromosomal abnormalities in colorectal cancer. Cancer Res. 66 (2006) 2129-2137
22. Wetzler M., Dodge R.K., Mrozek K., Stewart C.C., Carroll A.J., Tantravahi R., Vardiman J.W., Larson R.A., and Bloomfield C.D. Additional cytogenetic abnormalities in adults with Philadelphia chromosome-positive acute lymphoblastic leukaemia: a study of the Cancer and Leukaemia Group B. Br. J. Haematol. 24 (2004) 275-288
23. Rothman R., Trakhtenbrot L., Bielorai B., Izraeli S., Ishoev G., Amariglio N., Rechavi G., and Toren A. Co-existence of multiple sub-clones in TEL-AML1 at diagnosis of acute lymphoblastic leukemia in association with sub-microscopic deletion of AML1. Br. J. Haematol. 129 (2005) 491-498
24. Attarbaschi A., Mann G., Konig M., Dworzak M.N., Trebo M.M., Muhlegger N., Gadner H., and Haas O.A. Austrian Berlin-Frankfurt-Munster (BFM) Cooperative Study Group: incidence and relevance of secondary chromosome abnormalities in childhood TEL/AML1+ acute lymphoblastic leukemia: an interphase FISH analysis. Leukemia 18 (2004) 1611-1616