Systematic assessment of the tagging polymorphisms of the COL1A1 gene for high myopia

Journal of Human Genetics

Volumn 52, Issue 4, 2007, Pages 374-377

  Liang, Chung Ling ^a,b   Hung, Kuo Sheng ^c   Tsai, Yueh Ying ^d   Chang, Wansu ^d   Wang, Hsin Shih ^b   Juo, Suh Hang Hank ^d,e,f  

^a Bright Eyes Clinic   (Taiwan)

^b CHANG GUNG UNIVERSITY   (Taiwan)

^c TAIPEI MEDICAL UNIVERSITY   (Taiwan)

^d KAOHSIUNG MEDICAL UNIVERSITY   (Taiwan)

^e KAOHSIUNG MEDICAL UNIVERSITY HOSPITAL   (Taiwan)

^f MACKAY MEMORIAL HOSPITAL   (Taiwan)

Author keywords

Case control study; COL1A1; Haplotype; Myopia; SNP

Indexed keywords

COLLAGEN TYPE 1;

ADULT; ARTICLE; CASE CONTROL STUDY; CONTROLLED STUDY; FAMILY HISTORY; GENE INTERACTION; GENOTYPE; HAPLOTYPE; HIGH MYOPIA; HUMAN; MALE; SINGLE NUCLEOTIDE POLYMORPHISM;

ADOLESCENT; ADULT; ASIAN CONTINENTAL ANCESTRY GROUP; CASE-CONTROL STUDIES; COLLAGEN TYPE I; FEMALE; HAPLOTYPES; HUMANS; MALE; MYOPIA; POLYMORPHISM, SINGLE NUCLEOTIDE; RISK FACTORS; TAIWAN;

EID: 33947687063     PISSN: 14345161     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10038-007-0117-6     Document Type: Article

References (13)

1. Altshuler D, Brooks LD, Chakravarti A, Collins FS, Daly MJ, Donnelly P, International HapMap Consortium (2005) A haplotype map of the human genome. Nature 437:1299-1320
2. Barrett JC, Fry B, Maller J, Daly MJ (2005) Haploview: analysis and visualization of LD and haplotype maps. Bioinformatics 21:263-265
3. de Bakker PI, Yelensky R, Pe'er I, Gabriel SB, Daly MJ, Altshuler D (2005) Efficiency and power in genetic association studies. Nat Genet 37:1217-1223
4. Gentle A, Liu Y, Martin JE, Conti GL, McBrien NA (2003) Collagen gene expression and the altered accumulation of scleral collagen during the development of high myopia. J Biol Chem 278:16587-16594
5. Keeley FW, Morin JD, Vesely S (1984) Characterization of collagen from normal human sclera. Exp Eye Res 39:533-542
6. Liang CL, Yen E, Su JY, Liu C, Chang TY, Park N, Wu MJ, Lee S, Flynn JT, Juo SH (2004) The impact of the family history of high myopia on level and onset of myopia. Invest Ophthalmol Vis Sci 45:3446-3452
7. Lin LL, Shih YF, Hsiao CK, Chen CJ, Lee LA, Hung PT (2001) Epidemiologic study of the prevalence and severity of myopia among schoolchildren in Taiwan in 2000. J Formos Med Assoc 100:684-691
8. Mutti DO, Mitchell GL, Moeschberger ML, Jones LA, Zadnik K (2002) Parental myopia, near work, school achievement, and children's refractive error. Invest Ophthalmol Vis Sci 43:3633-3640
9. Norton TT, Rada JA (1995) Reduced extracellular matrix in mammalian sclera with induced myopia. Vision Res 35:1271-1281
10. Paluru P, Ronan SM, Heon E, Devoto M, Wildenberg SC, Scavello G, Holleschau A, Makitie O, Cole WG, King RA, Young TL (2003) New locus for autosomal dominant high myopia maps to the long arm of chromosome 17. Invest Ophthalmol Vis Sci 44:1830-1836
11. Tzeng JY, Wang CH, Kao JT, Hsiao CK (2006) Regression-based association analysis with clustered haplotypes through use of genotypes. Am J Hum Genet 78:231-242
12. Zeggini E, Rayner W, Morris AP, Hattersley AT, Walker M, Hitman GA, Deloukas P, Cardon LR, McCarthy MI (2005) An evaluation of HapMap sample size and tagging SNP performance in large-scale empirical and simulated data sets. Nat Genet 37:1320-1322
13. Lei SF, Deng FY, Liu XH, Huang QR, Qin Y, Zhou Q, Jiang DK, Li YM, Mo XY, Liu MY, Chen XD, Wu XS, Shen H, Dvornyk V, Zhao L, Recker RR, Deng HW (2003) Polymorphisms of four bone mineral density candidate genes in Chinese populations and comparison with other populations of different ethnicity. J Bone Miner Metab 21:34-42