Establishing bioinformatics research in the Asia Pacific

BMC Bioinformatics

Volumn 7, Issue SUPPL.5, 2006, Pages

  Ranganathan, Shoba ^a,b   Tammi, Martti ^b,c   Gribskov, Michael ^d   Tan, Tin Wee ^b  

^a MACQUARIE UNIVERSITY   (Australia)

^b NATIONAL UNIVERSITY OF SINGAPORE   (Singapore)

^c NATIONAL UNIVERSITY OF SINGAPORE   (Singapore)

^d PURDUE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AUCKLAND; CRITICAL MASS; MALAYSIA; NEW DELHI , INDIA; NEW ZEALAND; RESEARCH CULTURE; SOUTH KOREA; THAILAND; BANGKOK;

RESEARCH;

BIOINFORMATICS;

ASIA; BIOINFORMATICS; EDITORIAL; GENETIC ANALYSIS; IMMUNE SYSTEM; INDIA; INFORMATION PROCESSING; MALAYSIA; NEW ZEALAND; ORGANIZATION; PEER REVIEW; PROTEIN ANALYSIS; PROTEIN STRUCTURE; PUBLICATION; RESEARCH; SCIENTIFIC LITERATURE; SOUTH KOREA; THAILAND;

EID: 33947434476     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-7-S5-S1     Document Type: Editorial

References (35)

1. The Asia-Pacific Bioinformatics Network [http://apbionet.org]
2. Miyano S, Ranganathan S: The Asia-Pacific Regional Perspective on Bloinformatics. IEEE Intelligent Systems 2001, 16:19-61.
3. RangTnathan S, Subbiah S, Tan TW: APBioNet: the Asia-Pacific regional consortium for bioinformatics. Appl Bioinformatics 2002, 1:101-105.
4. Sugawara H, Miyazaki S: Towards the Asia-Pacific Bioinformatics Network. Pac Symp Biocomput 1998:759-764.
5. Gilbert D, Ugawa Y, Buchhorn M, Tan TW, Mizushima A, Kim H, Chon K, Weon S, Ma J, Ichiyanagi Y, Liou DM, Keretho S, Napis S: Bio-Mirror project for public bio-data distribution. Bioinformatics 2004, 20:3238-3240.
6. Lim YP, Höög JC, Gardner PS, Ranganathan S, Andersson S, Subbiah S, Tan TW, Hide W, Weiss AS: The S-Star Trial Bioinformatics Course: An On-Line Learning Success. Biochem Mol Biol Edu 2003, 31:20-23.
7. Genome Informatics Workshop [http://giw.ims.u-tokyo.ac.jp/giw/index.html]
8. International Life Science Grid Workshop (LSGRID) [http://www.lsgrid.org/ ]
9. th International Conference on Intelligent Systems for Molecular Biology (ISMB), Brisbane, Australia, June 29-July 3, 2003 [http://www.iscb.org/ ismb2003/]
10. Journal of Bioinformatics and Computational Biology (JBCB) http://www.worldscinet.com/jbcb/wbcb.shtml]
11. Applied Bioinformatics http://bioinformatics.adisonline.com]
12. Foret S, Kantorovitz MR, Burden C: Asymptotic behavior and optimal word size for exact and approximate k-word matches between random sequences. BMC Bioinformatics 2006, 7(Suppl 5):S20.
13. Sprenger J, Fink JL, Teasdale RD: Evaluation and comparison of mammalian subcellular localization prediction methods. BMC Bioinformatics 2006, 7(Suppl 5):S3.
14. Wee LJK, Tan TW, Ranganathan S: SVM-based prediction of caspase substrate cleavage sites. BMC Bioinformatics 2006, 7(Suppl 5):S14.
15. Lin HH, Han LY, Zhang HL, Zheng CJ, Xie B, Chen YZ: Prediction of the Functional Class of Metal-Binding Proteins from Sequence Derived Physicochemical Properties by Support Vector Machine Approach. BMC Bioinformatics 2006, 7(Suppl 5):S13.
16. Bhattacharya S, Chiranjib Bhattacharyya C, Chandra NR: Projections for Fast Retrieval of Protein Structures. BMC Bioinformatics 2006, 7(Suppl 5):S5.
17. Sikder AR, Zomaya AY: Improving the performance of Domain-Discovery of Protein Domain Boundary Assignment Using inter-domain Linker index. BMC Bioinformatics 2006, 7(Suppl 5):S6.
18. Suresh A, Verma C: Modelling study of dimerization in mammalian defensins. BMC Bioinformatics 2006, 7(Suppl 5):S17.
19. Thadani R, Tammi MT: MlicroTar. predicting microRNA targets from RNA duplexes. BMC Bioinformatics 2006, 7(Suppl 5):S21.
20. Takasaki S, Kawamura Y, Konagaya A: Selecting Effective siRNA Sequences by using Radial Basis Function Network and Decision Tree Learning. BMC Bioinformatics 2006, 7(Suppl 5):S20.
21. Baten AKMA, Chang BCH, Halgamuge SK, Li J: Splice site identification using probabilistic parameters and SVM classification. BMC Bioinformatics 2006, 7(SuppI 5):S15.
22. Brahmachary M, Schönbach C, Yang L, Huang E, Tan SL, Chowdhary R, Krishnan SPT, Lin CY, Hume DA, Kai C, Kawai J, Carninci P, Hayashizald Y, Bajic VB: Computational Promoter Analysis of Mouse, Rat and Human Antimicrobial Peptide-coding Genes. BMC Bioinformatics 2006, 7(Suppl 5):S8.
23. Wu X, Zhu L, Guo J, Fu C, Zhou H, Dong D, Li Z, Zhang DY, Lin K: SPIDer. Saccharomyces Protein-protein Interaction Database. BMC Bioinformatics 2006, 7(Suppl 5):S16.
24. Lin CY, Cho CS, Chen CL, Lin FK, Lin CH, Chen SH, Chen PY, Lo CZ, Hsiung CA: Fly-DPI: Database of Protein Interactomes for D. melanogaster in the Approach of Systems Biology. BMC Bioinformatics 2006, 7(Suppl 5):S18.
25. Mathivanan S, Periaswamy B, Gandhi TKB, Kandasamy K, Suresh S, Mohmood R, Ramachandra YL, Pandey A. An evaluation of human protein-protein interaction data in the public domain. BMC Bioinformatics 2006, 7(Suppl 5):S19.
26. Kulkarni-Kale U, Bhosle SG, Maniari GS, Joshi M, Bansode S, Kolaskar AS: Curation of viral genomes: Challenges, applications and the way forward. BMC Bioinformatics 2006, 7(Suppl 5):S12.
27. Ranjan S, Gundu RK, Ranjan A: MycoperonDB: A database of computationally identified operons and transcriptional units in Mycobacteria. BMC Bioinformatics 2006, 7(Suppl 5):S9.
28. Christoffels A, Bartfai R, Srinivasan H, Komen H, Orban L: Comparative genomics in cyprinids: Common carp ESTs help the annotation of the zebrafish genome. BMC Bioinformatics 2006, 7(Suppl 5):S2.
29. TsUi RTH, Sung CL, Dai HJ, Hung HC, Sung TY, Hsu WL: NERBio: using selected word conjunction, term normalization, and global patterns to improve biomedical named entity recognition. BMC Bioinformatics 2006, 7(Suppl 5):S11.
30. Khan AM, Heiny AT, Lee KX, Srinivasan KN, Tan TW, August JT, Brusic V: Large-scale sequence analysis of genetic and T-cell epitope antigenic diversity in dengue virus. BMC Bioinformatics 2006, 7(Suppl 5):S4.
31. Tong JC, Tan TW, Sinha AA, Ranganathan S: Prediction of desmoglein-3 peptides reveals multiple shared T-cell epitopes in HLA DR4- and DR6- associated Pemphigus vulgaris. BMC Bioinformatics 2006, 7(Suppl 5):S7.
32. Konagaya A: Trends in Life Science Grid: From Computing Grid to Knowledge Grid. BMC Bioinformatics 2006, 7(Suppl 5):S10.
33. The Association of Asian Societies for Bioinformatics [http://www.aasbi.org/]
34. Atkins DE, Droegemeier KK, Feldman SI, Garcia-Molina H, Klein ML, Messerschmitt DG, Messina P, Ostriker JP, Wright MH: Revolutionizing Science and Engineering Through Cyberinfrastructure: Report of the National Science Foundation Blue-Ribbon Advisory Panel on Cyberinfrastructure. [http://www.nsf.gov/cise/sci/reports/atkins.pdf].
35. East Asia Bioinformatics Network (EABN) [http://biocc.ngic.re.kr/ BiomeetinMediawikindex.php?title=EABN&redirect=no]