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Volumn 7, Issue SUPPL.5, 2006, Pages

NERBio: Using selected word conjunctions, term normalization, and global patterns to improve biomedical named entity recognition

Author keywords

[No Author keywords available]

Indexed keywords

AMBIGUOUS CONTEXTS; BASELINE SYSTEMS; BIOMEDICAL NAMED ENTITY RECOGNITION; CONDITIONAL RANDOM FIELD; LINGUISTIC PROPERTIES; MACHINE-LEARNING; REDUNDANT FEATURES; SEQUENTIAL FORWARD SEARCH ALGORITHMS; CONTEXT WINDOW; CUTTING EDGES; DATA SPARSENESS; FEATURE GROUPS; GLOBAL PATTERNS; LOCAL ALIGNMENT; MEMORY RESOURCES; NAMED ENTITIES; POST PROCESSING; PROTEIN NAMES; SMITH-WATERMAN;

EID: 33947384560     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-7-S5-S11     Document Type: Article
Times cited : (103)

References (39)
  • 1
    • 9544257285 scopus 로고    scopus 로고
    • iProLINK: An integrated protein resource for literature mining
    • Hu ZA, Mani I, Hermoso V, Liu H, Wu CH: IProLINK: an integrated protein resource for literature mining. Comput Biol Chem 2004, 28:409-416.
    • (2004) Comput Biol Chem , vol.28 , pp. 409-416
    • Hu, Z.Z.1    Mani, I.2    Hermoso, V.3    Liu, H.4    Wu, C.H.5
  • 2
    • 19944415036 scopus 로고    scopus 로고
    • Natural Language Processing and Systems Biology
    • In Springer Edited by: Dubitzky W, Azuaje F
    • Cohen KB, Hunter L: Natural Language Processing and Systems Biology. In Artificial Intelligence and Systems Biology. Springer Edited by: Dubitzky W, Azuaje F.; 2005.
    • (2005) Artificial Intelligence and Systems Biology
    • Cohen, K.B.1    Hunter, L.2
  • 4
    • 0742321913 scopus 로고    scopus 로고
    • Mining the biomedical literature in the genomic era: An overview
    • Shatkay H, Feldman R: Mining the biomedical literature in the genomic era: An overview. Journal of Computational Biology 2003, 10(6):821-855.
    • (2003) Journal of Computational Biology , vol.10 , Issue.6 , pp. 821-855
    • Shatkay, H.1    Feldman, R.2
  • 14
    • 33947429069 scopus 로고    scopus 로고
    • Feature Engineering and Post-Processing for Temporal Expression Recognition Using Conditional Random Fields
    • Adafre SF, Rijke Md: Feature Engineering and Post-Processing for Temporal Expression Recognition Using Conditional Random Fields. In ACL-05 Workshop on Feature Engineering Ann Arbor, 2005:9-16.
    • (2005) ACL-05 Workshop on Feature Engineering Ann Arbor , pp. 9-16
    • Adafre, S.F.1    Rijke, Md.2
  • 16
    • 33947305118 scopus 로고    scopus 로고
    • Identifying gene and protein mentions in text using conditional random fields
    • McDonald R, Pereira F: Identifying gene and protein mentions in text using conditional random fields. BMC Bioinformatics 2005, 6(Suppl 1):S6.
    • (2005) BMC Bioinformatics , vol.6 , Issue.SUPPL. 1
    • McDonald, R.1    Pereira, F.2
  • 17
    • 0013157252 scopus 로고    scopus 로고
    • Representing text chunks
    • EACL-99
    • Sang EFTK, Veenstra J: Representing text chunks. EACL-99 1999.
    • (1999)
    • Sang, E.F.T.K.1    Veenstra, J.2
  • 18
    • 84935113569 scopus 로고
    • Error bounds for convolutional codes and an asymptotically optimum decording algorithm
    • Viterbi AJ: Error bounds for convolutional codes and an asymptotically optimum decording algorithm. IEEE Transaction on Information Theory 1967, 13:260-269.
    • (1967) IEEE Transaction on Information Theory , vol.13 , pp. 260-269
    • Viterbi, A.J.1
  • 19
    • 24344501601 scopus 로고    scopus 로고
    • Maximum entropy Markov, models for information extraction and segmentation
    • ICML' 00
    • McCallum A, Freitag D, Pereira F: Maximum entropy Markov, models for information extraction and segmentation. ICML' 00 2000.
    • (2000)
    • McCallum, A.1    Freitag, D.2    Pereira, F.3
  • 20
    • 0042945288 scopus 로고
    • Une approche th'eorique del'apprentissage connexionniste: Applications'a la reconnaissance de la parole
    • Universit'e de Paris XI
    • Bottou L: Une approche th'eorique del'apprentissage connexionniste: Applications'a la reconnaissance de la parole. Universit'e de Paris XI 1991.
    • (1991)
    • Bottou, L.1
  • 21
    • 25444533246 scopus 로고    scopus 로고
    • Conditional random fields: Probabilistic models for segmenting and labeling sequence data
    • ICML'O1
    • Lafferty J, McCallum A, Pereira F: Conditional random fields: probabilistic models for segmenting and labeling sequence data. ICML'O1 2001.
    • (2001)
    • Lafferty, J.1    McCallum, A.2    Pereira, F.3
  • 24
    • 33947433116 scopus 로고    scopus 로고
    • Table extraction using conditional random fields
    • ACM SIGIR'03
    • Pinto D, McCallum A, Wei X, Croft WB: Table extraction using conditional random fields. ACM SIGIR'03 2003.
    • (2003)
    • Pinto, D.1    McCallum, A.2    Wei, X.3    Croft, W.B.4
  • 25
    • 33646436650 scopus 로고    scopus 로고
    • Shallow parsing with conditional random fields
    • HLT & NAACL' 03
    • Sha F, Pereira F: Shallow parsing with conditional random fields. HLT & NAACL' 03 2003.
    • (2003)
    • Sha, F.1    Pereira, F.2
  • 27
    • 2442702846 scopus 로고    scopus 로고
    • Recognizing names in biomedical texts: A machine learning approach
    • Zhou G, Zhang J, Su J, Shen D, Tan C: Recognizing names in biomedical texts: A machine learning approach. Bioinformatics 2004, 20:1178-1190.
    • (2004) Bioinformatics , vol.20 , pp. 1178-1190
    • Zhou, G.1    Zhang, J.2    Su, J.3    Shen, D.4    Tan, C.5
  • 30
    • 16244395412 scopus 로고    scopus 로고
    • Using biological resources to bootstrap text mining
    • Hirschman L: Using biological resources to bootstrap text mining. 2003.
    • (2003)
    • Hirschman, L.1
  • 36
    • 33745202625 scopus 로고    scopus 로고
    • An evaluation of filter and wrapper methods for feature selection in categorical clustering
    • In IDA-05 Madrid, Spain: Springer Verlag
    • Talavera L: An evaluation of filter and wrapper methods for feature selection in categorical clustering. In IDA-05 Madrid, Spain: Springer Verlag; 2005:440-451.
    • (2005) , pp. 440-451
    • Talavera, L.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.