Niabella aurantiaca gen. nov., sp. nov., isolated from a greenhouse soil in Korea

International Journal of Systematic and Evolutionary Microbiology

Volumn 57, Issue 3, 2007, Pages 538-541

  Kim, Byung Yong ^a   Weon, Hang Yeon ^b   Yoo, Seung Hee ^a   Hong, Seung Beom ^a   Kwon, Soon Wo ^a   Stackebrandt, Erko ^c   Goo, Seung Joo ^a  

^a National Institute of Agricultural Science   (South Korea)

^b National Institute of Animal Science   (South Korea)

^c LEIBNIZ INSTITUTE DSMZ GERMAN COLLECTION OF MICROORGANISMS AND CELL CULTURES   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; BACTERIAL RNA; FATTY ACID; GENOMIC DNA; QUINONE DERIVATIVE; RNA 16S; SODIUM CHLORIDE;

AEROBIC BACTERIUM; ARTICLE; BACTERIAL CELL; BACTERIAL GROWTH; BACTERIAL STRAIN; BACTERIUM ISOLATION; BACTEROIDETES; CONTROLLED STUDY; DNA CONTENT; GENE SEQUENCE; GENETIC SIMILARITY; GRAM NEGATIVE BACTERIUM; GREENHOUSE; KOREA; NIABELLA AURANTIACA; NIASTELLA KOREENSIS; NIASTELLA YEONGJUENSIS; NONHUMAN; NUCLEOTIDE SEQUENCE; PH MEASUREMENT; PHYLOGENY; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SOIL ANALYSIS; TEMPERATURE MEASUREMENT; TERRIMONAS FERRUGINEA; TERRIMONAS LUTEA;

DNA, BACTERIAL; DNA, RIBOSOMAL; FLAVOBACTERIUM; KOREA; MOLECULAR SEQUENCE DATA; PHYLOGENY; RNA, RIBOSOMAL, 16S; SOIL MICROBIOLOGY;

BACTERIA (MICROORGANISMS); BACTEROIDETES; NEGIBACTERIA; NIASTELLA; NIASTELLA KOREENSIS;

EID: 33947320940     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.64614-0     Document Type: Article

References (14)

1. Groth, L, Schumann, P., Weiss, N., Martin, K. & Rainey, F. A. (1996). Agrococcus jenensis gen. nov., sp. nov., a new genus of actinomycetes with diaminobutyric acid in the cell wall. Int J Syst Bacteriol 46, 234-239.
2. Kumar, S., Tamura, K. & Nei, M. (2004). MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5, 150-163.
3. Kwon, S. W., Kim, J. S., Park, I. C., Yoon, S. H., Park, D. H., Lim, C. K. & Go, S. J. (2003). Pseudornonas koreensis sp. nov., Pseudomonas umsongensis sp. nov. and Pseudomonas jinjuensis sp. nov., novel species from farm soils in Korea. Int J Syst Evol Microbiol 53, 21-27.
4. Liu, W. T., Nielsen, A. T., Wu, J. H., Tsai, C. S., Matsuo, Y. & Molin, S. (2001). In situ identification of polyphosphate- and polyhydroxyalkanoate-accumulating traits for microbial populations in a biological phosphorus removal process. Environ Microbiol 3, 110-122.
5. Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
6. Nakagawa, Y. & Yamasato, K. (1993). Phylogenetic diversity of the genus Cytophaga revealed by 16S rRNA sequencing and menaquinone analysis. J Gen Microbiol 139, 1155-1161.
7. Nakagawa, Y., Sakane, T., Suzuki, M. & Hatano, K. (2002). Phylogenetic structure of the genera Flexibacter, Flexithrix, and Microscilla deduced from 16S rRNA sequence analysis. J Gen Appl Microbiol 48, 155-165.
8. Reichenbach, H. (1992). The order Cytophagales. In The Prokaryotes. A Handbook on the Biology of Bacteria: Ecophysiology, Isolation, Identification, Applications, 2nd edn, pp. 3631-3675. Edited by A. Balows, H. G. Trüper, M. Dworkin, W. Harder & K. H. Schleifer. New York: Springer.
9. Sasser, M. (1990). Identification of bacteria by gas chromatography of cellular fatty acids. USFCC Newsl 20, 1-6.
10. Sly, L. I., Taghavi, M. & Fegan, M. (1999). Phylogenetic position of Chitinophaga pinensis in the Flexibacter-Bacteroides-Cytophaga phylum. Int J Syst Bacteriol 49, 479-481.
11. Smibert, R. M. & Krieg, N. R. (1994). Phenotypic characterization. In Methods for General and Molecular Bacteriology, pp. 607-654. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
12. Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
13. Weon, H. Y., Kim, B.-Y., Yoo, S.-H., Lee, S.-Y., Kwon, S.-W., Go, S.-J. & Stackebrandt, E. (2006). Niastella koreensis gen. nov., sp. nov. and Niastella yeongjuensis sp. nov., novel members of the phylum Bacteroidetes, isolated from soil cultivated with Korean ginseng. Int J Syst Evol Microbiol 56, 1777-1782.
14. Xie, C. H. & Yokota, A. (2006). Reclassification of [Flavobacterium] ferrugineum as Terrimonas ferruginea gen. nov., comb. nov., and description of Terrimonas lutea sp. nov., isolated from soil. Int J Syst Evol Microbiol 56, 1117-1121.