메뉴 건너뛰기




Volumn 14, Issue 1, 2007, Pages 57-81

Solitons in Yakushevich-like models of DNA dynamics with improved intrapair potential

Author keywords

[No Author keywords available]

Indexed keywords


EID: 33947188255     PISSN: 14029251     EISSN: None     Source Type: Journal    
DOI: 10.2991/jnmp.2007.14.1.6     Document Type: Article
Times cited : (16)

References (27)
  • 1
    • 0041779020 scopus 로고    scopus 로고
    • Helicoidal model for DNA opening
    • BARBI M, COCCO S and PEYRARD M, Helicoidal model for DNA opening, Phys. Lett. A 253 (1999), 358-369.
    • (1999) Phys. Lett. A , vol.253 , pp. 358-369
    • BARBI, M.1    COCCO, S.2    PEYRARD, M.3
  • 3
    • 33847622192 scopus 로고    scopus 로고
    • A composite Y model of DNA torsion dynamics
    • to appear; arXiv:q-bio.BM/0604014
    • CADONI M, DE LEO R and GAETA G, A composite Y model of DNA torsion dynamics, Phys. Rev. E (2007), to appear; arXiv:q-bio.BM/0604014
    • (2007) Phys. Rev. E
    • CADONI, M.1    DE LEO, R.2    GAETA, G.3
  • 6
    • 0000280897 scopus 로고
    • Dynamics of breather modes in a nonlinear helicoidal model of DNA
    • DAUXOIS TH, Dynamics of breather modes in a nonlinear helicoidal model of DNA, Phys. Lett. A 159 (1991), 390-395.
    • (1991) Phys. Lett. A , vol.159 , pp. 390-395
    • TH, D.1
  • 9
    • 1842601618 scopus 로고
    • Nature of the open state in long polynucleotide double helices: Possibility of soliton excitations
    • ENGLANDER S W, KALLENBACH N R, HEEGER A J, KRUMHANSL J A and LITWIN A, Nature of the open state in long polynucleotide double helices: possibility of soliton excitations, PNAS USA 77 (1980), 7222-7226.
    • (1980) PNAS USA , vol.77 , pp. 7222-7226
    • ENGLANDER, S.W.1    KALLENBACH, N.R.2    HEEGER, A.J.3    KRUMHANSL, J.A.4    LITWIN, A.5
  • 10
    • 0000043352 scopus 로고
    • On a model of DNA torsion dynamics
    • GAETA G, On a model of DNA torsion dynamics, Phys. Lett. A 143 (1990), 227-232.
    • (1990) Phys. Lett. A , vol.143 , pp. 227-232
    • GAETA, G.1
  • 11
    • 0000132905 scopus 로고
    • Solitons in planar and helicoidal Yakushevich model of DNA dynamics
    • GAETA G, Solitons in planar and helicoidal Yakushevich model of DNA dynamics, Phys. Lett. A 168 (1992), 383-389.
    • (1992) Phys. Lett. A , vol.168 , pp. 383-389
    • GAETA, G.1
  • 12
    • 2342512000 scopus 로고
    • A realistic version of the Y model for DNA dynamics; and selection of soliton speed
    • GAETA G, A realistic version of the Y model for DNA dynamics; and selection of soliton speed; Phys. Lett. A 190 (1994), 301-308.
    • (1994) Phys. Lett. A , vol.190 , pp. 301-308
    • GAETA, G.1
  • 13
    • 0001961501 scopus 로고    scopus 로고
    • Results and limits of the soliton theory of DNA transcription
    • GAETA G, Results and limits of the soliton theory of DNA transcription, J. Biol. Phys. 24 (1999), 81-96.
    • (1999) J. Biol. Phys , vol.24 , pp. 81-96
    • GAETA, G.1
  • 14
    • 33748270255 scopus 로고    scopus 로고
    • Solitons in the Yakushevich model of DNA beyond the contact approximation
    • GAETA G, Solitons in the Yakushevich model of DNA beyond the contact approximation, Phys. Rev. E 74 (2006), 021921.
    • (2006) Phys. Rev. E , vol.74 , pp. 021921
    • GAETA, G.1
  • 15
    • 51249161338 scopus 로고    scopus 로고
    • GAETA G, REISS C, PEYRARD M and DAUXOIS TH, Simple models of non-linear DNA dynamics, Rivista del Nuovo Cimento 17 (1994) n.4, 1-48.
    • GAETA G, REISS C, PEYRARD M and DAUXOIS TH, Simple models of non-linear DNA dynamics, Rivista del Nuovo Cimento 17 (1994) n.4, 1-48.
  • 16
    • 0000539669 scopus 로고    scopus 로고
    • GONZALEZ J A and MARTIN-LANDROVE M, Solitons in a nonlinear DNA model, Phys. Lett. A 191 (1994), 409-415.
    • GONZALEZ J A and MARTIN-LANDROVE M, Solitons in a nonlinear DNA model, Phys. Lett. A 191 (1994), 409-415.
  • 18
    • 33947130411 scopus 로고
    • Nonlinear excitations in biomolecules
    • PEYRARD M editor, held in Les Houches, Springer, Berlin and Les Editions de Physique, Paris
    • PEYRARD M (editor), Nonlinear excitations in biomolecules, (Proceedings of a workshop held in Les Houches, 1994), Springer, Berlin and Les Editions de Physique, Paris, 1995.
    • (1994) (Proceedings of a workshop
  • 19
    • 1642365792 scopus 로고    scopus 로고
    • Nonlinear dynamics and statistical physics of DNA
    • PEYRARD M, Nonlinear dynamics and statistical physics of DNA, Nonlinearity 17 (2004) R1-R40.
    • (2004) Nonlinearity , vol.17
    • PEYRARD, M.1
  • 20
    • 4243187319 scopus 로고
    • Statistical mechanics of a nonlinear model for DNA denaturation
    • PEYRARD M and BISHOP A R, Statistical mechanics of a nonlinear model for DNA denaturation, Phys. Rev. Lett. 62 (1989), 2755-2758.
    • (1989) Phys. Rev. Lett , vol.62 , pp. 2755-2758
    • PEYRARD, M.1    BISHOP, A.R.2
  • 21
    • 33750618208 scopus 로고    scopus 로고
    • The relevance of nonlinear stacking interactions in simple models of double-stranded DNA
    • SACCOMANDI G and SGURA I, The relevance of nonlinear stacking interactions in simple models of double-stranded DNA, J. Royal Soc. Interface 3 (2006), 655-667.
    • (2006) J. Royal Soc. Interface , vol.3 , pp. 655-667
    • SACCOMANDI, G.1    SGURA, I.2
  • 23
    • 0026495432 scopus 로고
    • Direct mechanical measurements of the elasticity of single DNA molecules by using magnetic beads
    • SMITH S B, FINZI L and BUSTAMANTE C, Direct mechanical measurements of the elasticity of single DNA molecules by using magnetic beads, Science 258 (1992), 1122-1126.
    • (1992) Science , vol.258 , pp. 1122-1126
    • SMITH, S.B.1    FINZI, L.2    BUSTAMANTE, C.3
  • 24
    • 0000784785 scopus 로고
    • Nonlinear DNA dynamics: A new model
    • YAKUSHEVICH L V, Nonlinear DNA dynamics: a new model, Phys. Lett. A 136 (1989), 413-417.
    • (1989) Phys. Lett. A , vol.136 , pp. 413-417
    • YAKUSHEVICH, L.V.1
  • 25
    • 0002216927 scopus 로고
    • Nonlinear DNA dynamics: Hyerarchy of the models
    • YAKUSHEVICH L V, Nonlinear DNA dynamics: hyerarchy of the models, Physica D 79 (1994), 77-86.
    • (1994) Physica D , vol.79 , pp. 77-86
    • YAKUSHEVICH, L.V.1
  • 27


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.