메뉴 건너뛰기




Volumn 9, Issue 4, 2007, Pages 971-982

Use of microarrays to assess viral diversity: From genotype to phenotype

Author keywords

[No Author keywords available]

Indexed keywords

CAPSID PROTEIN; DNA DIRECTED DNA POLYMERASE; VIRUS DNA;

EID: 33947125497     PISSN: 14622912     EISSN: 14622920     Source Type: Journal    
DOI: 10.1111/j.1462-2920.2006.01219.x     Document Type: Article
Times cited : (39)

References (25)
  • 2
    • 33645846578 scopus 로고    scopus 로고
    • Preliminary characterisation of repeat families in the genome of EhV-86, a giant algal virus that infects the marine microalga Emiliania huxleyi
    • Allen, M.J., Schroeder, D.C., and Wilson, W.H. (2006b) Preliminary characterisation of repeat families in the genome of EhV-86, a giant algal virus that infects the marine microalga Emiliania huxleyi. Arch Virol 151: 525-535.
    • (2006) Arch Virol , vol.151 , pp. 525-535
    • Allen, M.J.1    Schroeder, D.C.2    Wilson, W.H.3
  • 3
    • 33746214684 scopus 로고    scopus 로고
    • Locus-specific gene expression pattern suggests a unique propagation strategy for a giant algal virus
    • Allen, M.J., Forster, T., Schroeder, D.C., Hall, M., Roy, D., Ghazal, P., and Wilson, W.H. (2006c) Locus-specific gene expression pattern suggests a unique propagation strategy for a giant algal virus. J Virol 80: 7699-7705.
    • (2006) J Virol , vol.80 , pp. 7699-7705
    • Allen, M.J.1    Forster, T.2    Schroeder, D.C.3    Hall, M.4    Roy, D.5    Ghazal, P.6    Wilson, W.H.7
  • 5
    • 1942441434 scopus 로고    scopus 로고
    • Viral control of phytoplankton populations - a review
    • Brussaard, C.P.D. (2004) Viral control of phytoplankton populations - a review. J Eukaryot Microbiol 51: 125-138.
    • (2004) J Eukaryot Microbiol , vol.51 , pp. 125-138
    • Brussaard, C.P.D.1
  • 7
    • 32944469172 scopus 로고    scopus 로고
    • On resemblance measures for ecological studies, including taxonomic dissimilarities and a zero-adjusted Bray-Curtis coefficient for denuded assemblages
    • Clarke, K.R., Somerfield, P.J., and Chapman, M.G. (2006) On resemblance measures for ecological studies, including taxonomic dissimilarities and a zero-adjusted Bray-Curtis coefficient for denuded assemblages. J Exp Mar Biol Ecol 330: 55-80.
    • (2006) J Exp Mar Biol Ecol , vol.330 , pp. 55-80
    • Clarke, K.R.1    Somerfield, P.J.2    Chapman, M.G.3
  • 8
    • 0035881839 scopus 로고    scopus 로고
    • The complete DNA sequence of the Ectocarpus siliculosus virus EsV-1 genome
    • Delaroque, N., Muller, D.G., Bothe, G., Pohl, T., Knippers, R., and Boland, W. (2001) The complete DNA sequence of the Ectocarpus siliculosus virus EsV-1 genome. Virology 287: 112-132.
    • (2001) Virology , vol.287 , pp. 112-132
    • Delaroque, N.1    Muller, D.G.2    Bothe, G.3    Pohl, T.4    Knippers, R.5    Boland, W.6
  • 9
    • 33644858388 scopus 로고    scopus 로고
    • Long serial analysis of gene expression for gene discovery and transcriptome profiling in the widespread marine coccolithophore Emiliania huxleyi
    • Dyhrman, S.T., Haley, S.T., Birkeland, S.R., Wurch, L.L., Cipriano, M.J., and McArthur, A.G. (2006) Long serial analysis of gene expression for gene discovery and transcriptome profiling in the widespread marine coccolithophore Emiliania huxleyi. Appl Environ Microbiol 72: 252-260.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 252-260
    • Dyhrman, S.T.1    Haley, S.T.2    Birkeland, S.R.3    Wurch, L.L.4    Cipriano, M.J.5    McArthur, A.G.6
  • 11
    • 33947176056 scopus 로고    scopus 로고
    • Felsenstein, J, 1995 PHYLIP (Phylogeny Inference Package) Version 3.57c. Seattle, WA, USA: University of Washington
    • Felsenstein, J. (1995) PHYLIP (Phylogeny Inference Package) Version 3.57c. Seattle, WA, USA: University of Washington.
  • 12
    • 27744469077 scopus 로고    scopus 로고
    • maxdLoad2 and maxdBrowse: Standards-compliant tools for microarray experimental annotation, data management and dissemination
    • Hancock, D., Wilson, M., Velarde, G., Morrison, N., Hayes, A., Hulme, H., et al. (2005) maxdLoad2 and maxdBrowse: standards-compliant tools for microarray experimental annotation, data management and dissemination. BMC Bioinformatics 6: 264.
    • (2005) BMC Bioinformatics , vol.6 , pp. 264
    • Hancock, D.1    Wilson, M.2    Velarde, G.3    Morrison, N.4    Hayes, A.5    Hulme, H.6
  • 14
    • 0028797833 scopus 로고
    • Analysis of 45-Kb of DNA located at the left end of the Chlorella-virus PBCV-1 genome
    • Lu, Z.Q., Li, Y., Zhang, Y.P., Kutish, G.F., Rock, D.L., and Vanetten, J.L. (1995) Analysis of 45-Kb of DNA located at the left end of the Chlorella-virus PBCV-1 genome. Virology 206: 339-352.
    • (1995) Virology , vol.206 , pp. 339-352
    • Lu, Z.Q.1    Li, Y.2    Zhang, Y.P.3    Kutish, G.F.4    Rock, D.L.5    Vanetten, J.L.6
  • 15
    • 33846436106 scopus 로고    scopus 로고
    • Molecular dynamics of Emiliana huxleyi and their co-occurring viruses during two separate mesocosm studies
    • in press, Epub ahead of print 10 November
    • Martinez, J.M., Schroeder, D.C., Larsen, A., Bratbak, G., and Wilson, W.H. (2007) Molecular dynamics of Emiliana huxleyi and their co-occurring viruses during two separate mesocosm studies. Appl Environ Microbiol (in press). Epub ahead of print 10 November 2006.
    • (2006) Appl Environ Microbiol
    • Martinez, J.M.1    Schroeder, D.C.2    Larsen, A.3    Bratbak, G.4    Wilson, W.H.5
  • 16
    • 0030203863 scopus 로고    scopus 로고
    • TREEVIEW: An application to display phylogeaetic trees on personal computers
    • Page, R.D.M. (1996) TREEVIEW: An application to display phylogeaetic trees on personal computers. Comput Appl Biosci 12: 357-358.
    • (1996) Comput Appl Biosci , vol.12 , pp. 357-358
    • Page, R.D.M.1
  • 17
    • 0036039656 scopus 로고    scopus 로고
    • Coccolithovirus (Phycodnaviridae): Characterisation of a new large dsDNA algal virus that infects Emiliania huxleyi
    • Schroeder, D.C., Oke, J., Malin, G., and Wilson, W.H. (2002) Coccolithovirus (Phycodnaviridae): characterisation of a new large dsDNA algal virus that infects Emiliania huxleyi. Arch Virol 147: 1685-1698.
    • (2002) Arch Virol , vol.147 , pp. 1685-1698
    • Schroeder, D.C.1    Oke, J.2    Malin, G.3    Wilson, W.H.4
  • 19
    • 25144506135 scopus 로고    scopus 로고
    • Viruses in the sea
    • Suttle, C.A. (2005) Viruses in the sea. Nature 437: 356-361.
    • (2005) Nature , vol.437 , pp. 356-361
    • Suttle, C.A.1
  • 22
    • 0000971392 scopus 로고
    • Emiliania huxleyi as a key to biosphere-geoshere interactions
    • Green, J.C, and Leadbeater, B.S.C, eds, Oxford, UK: Clarendon Press, pp
    • Westbroek, P., vanHinte, J.E., Brummer, G.J., Veldhuis, M., Brownlee, C., Green, J.C., et al. (1994) Emiliania huxleyi as a key to biosphere-geoshere interactions. In The Haptophyte Algae. Green, J.C., and Leadbeater, B.S.C. (eds). Oxford, UK: Clarendon Press, pp. 321-334.
    • (1994) The Haptophyte Algae , pp. 321-334
    • Westbroek, P.1    vanHinte, J.E.2    Brummer, G.J.3    Veldhuis, M.4    Brownlee, C.5    Green, J.C.6
  • 23
    • 0036621805 scopus 로고    scopus 로고
    • Isolation of viruses responsible for the demise of an Emiliania huxleyi bloom in the English Channel
    • Wilson, W.H., Tarran, G.A., Schroeder, D., Cox, M., Oke, J., and Malin, G. (2002) Isolation of viruses responsible for the demise of an Emiliania huxleyi bloom in the English Channel. J Mar Biol Assoc UK 82: 369-377.
    • (2002) J Mar Biol Assoc UK , vol.82 , pp. 369-377
    • Wilson, W.H.1    Tarran, G.A.2    Schroeder, D.3    Cox, M.4    Oke, J.5    Malin, G.6
  • 24
    • 33947106909 scopus 로고    scopus 로고
    • Wilson, W.H., Van Etten, J.L., Schroeder, D.C., Nagasaki, K., Brussaard, C., Delaroque, N., et al. (2005a) Family: Phycodnaviridae. In Virus Taxonomy, VIIIth ICTV Report. Fauquet, C.M., Mayo, M.A., Maniloff, J., Dusselberger, U., and Ball, L.A. (eds). London, UK: Elsevier/Academic Press, pp. 163-175.
    • Wilson, W.H., Van Etten, J.L., Schroeder, D.C., Nagasaki, K., Brussaard, C., Delaroque, N., et al. (2005a) Family: Phycodnaviridae. In Virus Taxonomy, VIIIth ICTV Report. Fauquet, C.M., Mayo, M.A., Maniloff, J., Dusselberger, U., and Ball, L.A. (eds). London, UK: Elsevier/Academic Press, pp. 163-175.
  • 25
    • 23644461765 scopus 로고    scopus 로고
    • Complete genome sequence and lytic phase transcription profile of a Coccolithovirus
    • Wilson, W.H., Schroeder, D.C., Allen, M.J., Holden, M.T.G., Parkhill, J., Barrell, B.G., et al. (2005b) Complete genome sequence and lytic phase transcription profile of a Coccolithovirus. Science 309: 1090-1092.
    • (2005) Science , vol.309 , pp. 1090-1092
    • Wilson, W.H.1    Schroeder, D.C.2    Allen, M.J.3    Holden, M.T.G.4    Parkhill, J.5    Barrell, B.G.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.