-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S.F., Madden, T.L., Schaeffer, A.A., Zhang, J., Zhang, Z., Miller, W., and Lipman, D.J. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaeffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
0030818333
-
Genetics of eubacterial carotenoid biosynthesis: A colorful tale
-
Armstrong, G.A. (1997) Genetics of eubacterial carotenoid biosynthesis: a colorful tale. Annu Rev Microbiol 51: 629-659.
-
(1997)
Annu Rev Microbiol
, vol.51
, pp. 629-659
-
-
Armstrong, G.A.1
-
3
-
-
25444463058
-
Xanthorhodopsin: A proton pump with a light-harvesting carotenoid antenna
-
Balashov, S.P., Imasheva, E.S., Boichenko, V.A., Anton, J., Wang, J.M., and Lanyi, J.K. (2005) Xanthorhodopsin: a proton pump with a light-harvesting carotenoid antenna. Science 309: 2061-2064.
-
(2005)
Science
, vol.309
, pp. 2061-2064
-
-
Balashov, S.P.1
Imasheva, E.S.2
Boichenko, V.A.3
Anton, J.4
Wang, J.M.5
Lanyi, J.K.6
-
4
-
-
8744235102
-
Genome sequence of Haloarcula marismortui: A halophilic archaeon from the Dead Sea
-
Baliga, N.S., Bonneau, R., Facciotti, M.T., Pan, M., Glusman, G., Deutsch, E.W., et al. (2004) Genome sequence of Haloarcula marismortui: a halophilic archaeon from the Dead Sea. Genome Res 14: 2221-2234.
-
(2004)
Genome Res
, vol.14
, pp. 2221-2234
-
-
Baliga, N.S.1
Bonneau, R.2
Facciotti, M.T.3
Pan, M.4
Glusman, G.5
Deutsch, E.W.6
-
5
-
-
26444506791
-
Highways of gene sharing in prokaryotes
-
Beiko, R.G., Harlow, T.J., and Ragan, M.A. (2005) Highways of gene sharing in prokaryotes. Proc Natl Acad Sci USA 102: 14332-14337.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 14332-14337
-
-
Beiko, R.G.1
Harlow, T.J.2
Ragan, M.A.3
-
6
-
-
0034665853
-
Bacterial rhodopsin: Evidence for a new type of phototrophy in the sea
-
Beja, O., Aravind, L., Koonin, E.V., Suzuki, M.T., Hadd, A., Nguyen, L.P., et al. (2000a) Bacterial rhodopsin: evidence for a new type of phototrophy in the sea. Science 289: 1902-1906.
-
(2000)
Science
, vol.289
, pp. 1902-1906
-
-
Beja, O.1
Aravind, L.2
Koonin, E.V.3
Suzuki, M.T.4
Hadd, A.5
Nguyen, L.P.6
-
7
-
-
0034554741
-
Construction and analysis of bacterial artificial chromosome libraries from a marine microbial assemblage
-
Beja, O., Suzuki, M.T., Koonin, E.V., Aravind, L., Hadd, A., Nguyen, L.P., et al. (2000b) Construction and analysis of bacterial artificial chromosome libraries from a marine microbial assemblage. Environ Microbiol 2: 516-529.
-
(2000)
Environ Microbiol
, vol.2
, pp. 516-529
-
-
Beja, O.1
Suzuki, M.T.2
Koonin, E.V.3
Aravind, L.4
Hadd, A.5
Nguyen, L.P.6
-
8
-
-
0035859080
-
Proteorhodopsin phototrophy in the ocean
-
Beja, O., Spudich, E.N., Spudich, J.L., Leclerc, M., and DeLong, E.F. (2001) Proteorhodopsin phototrophy in the ocean. Nature 411: 786-789.
-
(2001)
Nature
, vol.411
, pp. 786-789
-
-
Beja, O.1
Spudich, E.N.2
Spudich, J.L.3
Leclerc, M.4
DeLong, E.F.5
-
9
-
-
0035989637
-
Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family
-
Bernardet, J.F., Nakagawa, Y., and Holmes, B. (2002) Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family. Int J Syst Evol Microbiol 52: 1049-1070.
-
(2002)
Int J Syst Evol Microbiol
, vol.52
, pp. 1049-1070
-
-
Bernardet, J.F.1
Nakagawa, Y.2
Holmes, B.3
-
10
-
-
6944240079
-
Darwinian adaptation of proteorhodopsin to different light intensities in the marine environment
-
Bielawski, J., Dunn, K., Sabehi, G., and Beja, O. (2004) Darwinian adaptation of proteorhodopsin to different light intensities in the marine environment. Proc Natl Acad Sci USA 101: 14824-14829.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 14824-14829
-
-
Bielawski, J.1
Dunn, K.2
Sabehi, G.3
Beja, O.4
-
11
-
-
4544235395
-
Archaeal phylogeny based on proteins of the transcription and translation machineries: Tackling the Methanopyrus kandleri paradox
-
Brochier, C., Forterre, P., and Gribaldo, S. (2004) Archaeal phylogeny based on proteins of the transcription and translation machineries: tackling the Methanopyrus kandleri paradox. Genome Biol 5: R17.
-
(2004)
Genome Biol
, vol.5
-
-
Brochier, C.1
Forterre, P.2
Gribaldo, S.3
-
12
-
-
24044433279
-
ACT: The Artemis comparison tool
-
Carver, T.J., Rutherford, K.M., Berriman, M., Rajandream, M.-A., Barrell, B.G., and Parkhill, J. (2005) ACT: the Artemis comparison tool. Bioinformatics 21: 3422-3423.
-
(2005)
Bioinformatics
, vol.21
, pp. 3422-3423
-
-
Carver, T.J.1
Rutherford, K.M.2
Berriman, M.3
Rajandream, M.-A.4
Barrell, B.G.5
Parkhill, J.6
-
13
-
-
0033617475
-
Cryptochromes: Blue light receptors for plants and animals
-
Cashmore, A.R., Jarillo, J.A., Wu, Y.-J., and Liu, D. (1999) Cryptochromes: blue light receptors for plants and animals. Science 284: 760-765.
-
(1999)
Science
, vol.284
, pp. 760-765
-
-
Cashmore, A.R.1
Jarillo, J.A.2
Wu, Y.-J.3
Liu, D.4
-
14
-
-
31544483932
-
Community genomics among stratified microbial assemblages in the ocean's interior
-
DeLong, E.F., Preston, C.M., Mincer, T., Rich, V., Hallam, S.J., Frigaard, N.U., et al. (2006) Community genomics among stratified microbial assemblages in the ocean's interior. Science 311: 496-503.
-
(2006)
Science
, vol.311
, pp. 496-503
-
-
DeLong, E.F.1
Preston, C.M.2
Mincer, T.3
Rich, V.4
Hallam, S.J.5
Frigaard, N.U.6
-
15
-
-
32344444896
-
Photolyases and cryptochromes: Common mechanisms of DNA repair and light-driven signaling?
-
Essen, L.O. (2006) Photolyases and cryptochromes: common mechanisms of DNA repair and light-driven signaling? Curr Opin Struct Biol 16: 51-59.
-
(2006)
Curr Opin Struct Biol
, vol.16
, pp. 51-59
-
-
Essen, L.O.1
-
16
-
-
32844465575
-
Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea
-
Frigaard, N.U., Martinez, A., Mincer, T.J., and DeLong, E.F. (2006) Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea. Nature 439: 847-850.
-
(2006)
Nature
, vol.439
, pp. 847-850
-
-
Frigaard, N.U.1
Martinez, A.2
Mincer, T.J.3
DeLong, E.F.4
-
17
-
-
0037464589
-
The genome sequence of the filamentous fungus Neurospora crassa
-
Galagan, J.E., Calvo, S.E., Borkovich, K.A., Selker, E.U., Read, N.D., Jaffe, D., et al. (2003) The genome sequence of the filamentous fungus Neurospora crassa. Nature 422: 859-868.
-
(2003)
Nature
, vol.422
, pp. 859-868
-
-
Galagan, J.E.1
Calvo, S.E.2
Borkovich, K.A.3
Selker, E.U.4
Read, N.D.5
Jaffe, D.6
-
18
-
-
23844446418
-
Genome streamlining in a cosmopolitan oceanic bacterium
-
Giovannoni, S.J., Tripp, H.J., Givan, S., Podar, M., Vergin, K.L., Baptista, D., et al. (2005a) Genome streamlining in a cosmopolitan oceanic bacterium. Science 309: 1242-1245.
-
(2005)
Science
, vol.309
, pp. 1242-1245
-
-
Giovannoni, S.J.1
Tripp, H.J.2
Givan, S.3
Podar, M.4
Vergin, K.L.5
Baptista, D.6
-
19
-
-
27744438187
-
Proteorhodopsin in the ubiquitous marine bacterium SAR11
-
Giovannoni, S.J., Bibbs, L., Cho, J.-C., Stapels, M.D., Desiderio, R., Vergin, K.L., et al. (2005b) Proteorhodopsin in the ubiquitous marine bacterium SAR11. Nature 438: 82-85.
-
(2005)
Nature
, vol.438
, pp. 82-85
-
-
Giovannoni, S.J.1
Bibbs, L.2
Cho, J.-C.3
Stapels, M.D.4
Desiderio, R.5
Vergin, K.L.6
-
20
-
-
0038676914
-
Carotenoid oxygenases: Cleave it or leave it
-
Giuliano, G., Al-Babili, S., and von Lintig, J. (2003) Carotenoid oxygenases: cleave it or leave it. Trends Plant Sci 8: 145-149.
-
(2003)
Trends Plant Sci
, vol.8
, pp. 145-149
-
-
Giuliano, G.1
Al-Babili, S.2
von Lintig, J.3
-
21
-
-
0037478650
-
Complete genome sequence of the marine planctomycete Pirellula sp. strain 1
-
Glockner, F.O., Kube, M., Bauer, M., Teeling, H., Lombardot, T., Ludwig, W., et al. (2003) Complete genome sequence of the marine planctomycete Pirellula sp. strain 1. Proc Natl Acad Sci USA 100: 8298-8303.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 8298-8303
-
-
Glockner, F.O.1
Kube, M.2
Bauer, M.3
Teeling, H.4
Lombardot, T.5
Ludwig, W.6
-
22
-
-
4444370893
-
Reverse methanogenesis: Testing the hypothesis with environmental genomics
-
Hallam, S.J., Putnam, N., Preston, C.M., Detter, J.C., Rokhsar, D., Richardson, P.M., and DeLong, E.F. (2004) Reverse methanogenesis: testing the hypothesis with environmental genomics. Science 305: 1457-1462.
-
(2004)
Science
, vol.305
, pp. 1457-1462
-
-
Hallam, S.J.1
Putnam, N.2
Preston, C.M.3
Detter, J.C.4
Rokhsar, D.5
Richardson, P.M.6
DeLong, E.F.7
-
23
-
-
33646260901
-
Pathways of carbon assimilation and ammonia oxidation suggested by environmental genomic analyses of marine Crenarchaeota
-
Hallam, S.J., Mincer, T.J., Schleper, C., Preston, C.M., Roberts, K., Richardson, P.M., and DeLong, E.F. (2006) Pathways of carbon assimilation and ammonia oxidation suggested by environmental genomic analyses of marine Crenarchaeota. PLoS Biol 4: 520-536.
-
(2006)
PLoS Biol
, vol.4
, pp. 520-536
-
-
Hallam, S.J.1
Mincer, T.J.2
Schleper, C.3
Preston, C.M.4
Roberts, K.5
Richardson, P.M.6
DeLong, E.F.7
-
24
-
-
0034660609
-
Bacterial cryptochrome and photolyase: Characterization of two photolyase-like genes of Synechocystis sp. PCC6803
-
Hitomi, K., Okamoto, K., Daiyasu, H., Miyashita, H., Iwai, S., Toh, H., et al. (2000) Bacterial cryptochrome and photolyase: characterization of two photolyase-like genes of Synechocystis sp. PCC6803. Nucleic Acids Res 28: 2353-2362.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 2353-2362
-
-
Hitomi, K.1
Okamoto, K.2
Daiyasu, H.3
Miyashita, H.4
Iwai, S.5
Toh, H.6
-
25
-
-
0037346546
-
Demonstration of a sensory rhodopsin in eubacteria
-
Jung, K.-H., Trivedi, V.D., and Spudich, J.L. (2003) Demonstration of a sensory rhodopsin in eubacteria. Mol Microbiol 47: 1513-1522.
-
(2003)
Mol Microbiol
, vol.47
, pp. 1513-1522
-
-
Jung, K.-H.1
Trivedi, V.D.2
Spudich, J.L.3
-
26
-
-
0030970352
-
Expression of an exogenous isopentenyl diphosphate isomerase gene enhances isoprenoid biosynthesis in Escherichia coli
-
Kajiwara, S., Fraser, P.D., Kondo, K., and Misawa, N. (1997) Expression of an exogenous isopentenyl diphosphate isomerase gene enhances isoprenoid biosynthesis in Escherichia coli. Biochem J 324: 421-426.
-
(1997)
Biochem J
, vol.324
, pp. 421-426
-
-
Kajiwara, S.1
Fraser, P.D.2
Kondo, K.3
Misawa, N.4
-
27
-
-
0035970116
-
An unusual isopentenyl diphosphate isomerase found in the mevalonate pathway gene cluster from Streptomyces sp. strain CL190
-
Kaneda, K., Kuzuyama, T., Takagi, M., Hayakawa, Y., and Seto, H. (2001) An unusual isopentenyl diphosphate isomerase found in the mevalonate pathway gene cluster from Streptomyces sp. strain CL190. Proc Natl Acad Sci USA 98: 932-937.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 932-937
-
-
Kaneda, K.1
Kuzuyama, T.2
Takagi, M.3
Hayakawa, Y.4
Seto, H.5
-
28
-
-
0035980822
-
Complete genomic sequence of the filamentous nitrogen-fixing cyanobacterium Anabaena sp. strain PCC 7120
-
Kaneko, T., Nakamura, Y., Wolk, C.P., Kuritz, T., Sasamoto, S., Watanabe, A., et al. (2001) Complete genomic sequence of the filamentous nitrogen-fixing cyanobacterium Anabaena sp. strain PCC 7120. DNA Res 8: 205-213.
-
(2001)
DNA Res
, vol.8
, pp. 205-213
-
-
Kaneko, T.1
Nakamura, Y.2
Wolk, C.P.3
Kuritz, T.4
Sasamoto, S.5
Watanabe, A.6
-
29
-
-
0034780910
-
Horizontal gene transfer in prokaryotes: Quantification and classification
-
Koonin, E.V., Makarova, K.S., and Aravind, L. (2001) Horizontal gene transfer in prokaryotes: quantification and classification. Annu Rev Microbiol 55: 709-742.
-
(2001)
Annu Rev Microbiol
, vol.55
, pp. 709-742
-
-
Koonin, E.V.1
Makarova, K.S.2
Aravind, L.3
-
30
-
-
0037394552
-
Diversity of the biosynthesis of the isoprene units
-
Kuzuyama, T., and Seto, H. (2003) Diversity of the biosynthesis of the isoprene units. Nat Prod Rep 20: 171-183.
-
(2003)
Nat Prod Rep
, vol.20
, pp. 171-183
-
-
Kuzuyama, T.1
Seto, H.2
-
31
-
-
0038391981
-
Diversification and spectral tuning in marine proteorhodopsins
-
Man, D., Wang, W., Sabehi, G., Aravind, L., Post, A.F., Massana, R., et al. (2003) Diversification and spectral tuning in marine proteorhodopsins. EMBO J 22: 1725-1731.
-
(2003)
EMBO J
, vol.22
, pp. 1725-1731
-
-
Man, D.1
Wang, W.2
Sabehi, G.3
Aravind, L.4
Post, A.F.5
Massana, R.6
-
32
-
-
29144485325
-
The genome of Salinibacter ruber: Convergence and gene exchange among hyperhalophilic bacteria and archaea
-
Mongodin, E.F., Nelson, K.E., Daugherty, S., DeBoy, R.T., Wister, J., Khouri, H., et al. (2005) The genome of Salinibacter ruber: convergence and gene exchange among hyperhalophilic bacteria and archaea. Proc Natl Acad Sci USA 102: 18147-18152.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 18147-18152
-
-
Mongodin, E.F.1
Nelson, K.E.2
Daugherty, S.3
DeBoy, R.T.4
Wister, J.5
Khouri, H.6
-
33
-
-
12444292075
-
Complete genome structure of Gloeobacter violaceus PCC 7421, a cyanobacterium that lacks thylakoids
-
Nakamura, Y., Kaneko, T., Sato, S., Mimuro, M., Miyashita, H., Tsuchiya, T., et al. (2003) Complete genome structure of Gloeobacter violaceus PCC 7421, a cyanobacterium that lacks thylakoids. DNA Res 10: 137-145.
-
(2003)
DNA Res
, vol.10
, pp. 137-145
-
-
Nakamura, Y.1
Kaneko, T.2
Sato, S.3
Mimuro, M.4
Miyashita, H.5
Tsuchiya, T.6
-
34
-
-
28644452091
-
Lateral gene transfer and phylogenetic assignment of environmental fosmid clones
-
Nesbo, C.L., Boucher, Y., Dlutek, M., and Doolittle, W.F. (2005) Lateral gene transfer and phylogenetic assignment of environmental fosmid clones. Environ Microbiol 7: 2011-2026.
-
(2005)
Environ Microbiol
, vol.7
, pp. 2011-2026
-
-
Nesbo, C.L.1
Boucher, Y.2
Dlutek, M.3
Doolittle, W.F.4
-
35
-
-
0038009383
-
Novel dinoflagellate clock-related genes identified through microarray analysis
-
Okamoto, O.K., and Hastings, J.W. (2003) Novel dinoflagellate clock-related genes identified through microarray analysis. J Phycol 39: 519-526.
-
(2003)
J Phycol
, vol.39
, pp. 519-526
-
-
Okamoto, O.K.1
Hastings, J.W.2
-
36
-
-
0642312313
-
Evolution of mosaic operons by horizontal gene transfer and gene displacement in situ
-
Omelchenko, M.V., Makarova, K.S., Wolf, Y.I., Rogozin, I.B., and Koonin, E.V. (2003) Evolution of mosaic operons by horizontal gene transfer and gene displacement in situ. Genome Biol 4: R55.
-
(2003)
Genome Biol
, vol.4
-
-
Omelchenko, M.V.1
Makarova, K.S.2
Wolf, Y.I.3
Rogozin, I.B.4
Koonin, E.V.5
-
37
-
-
0035937192
-
brp and blh are required for synthesis of the retinal cofactor of bacteriorhodopsin in Halobacterium salinarum
-
Peck, R.F., Echavarri-Erasun, C., Johnson, E.A., Ng, W.V., Kennedy, S.P., Hood, L., et al. (2001) brp and blh are required for synthesis of the retinal cofactor of bacteriorhodopsin in Halobacterium salinarum. J Biol Chem 276: 5739-5744.
-
(2001)
J Biol Chem
, vol.276
, pp. 5739-5744
-
-
Peck, R.F.1
Echavarri-Erasun, C.2
Johnson, E.A.3
Ng, W.V.4
Kennedy, S.P.5
Hood, L.6
-
38
-
-
1842531691
-
New insights into the evolutionary history of type 1 rhodopsins
-
Ruiz-Gonzalez, M.X., and Marin, I. (2004) New insights into the evolutionary history of type 1 rhodopsins. J Mol Evol 58: 348-358.
-
(2004)
J Mol Evol
, vol.58
, pp. 348-358
-
-
Ruiz-Gonzalez, M.X.1
Marin, I.2
-
39
-
-
0033635022
-
Artemis: Sequence visualization and annotation
-
Rutherford, K., Parkhill, J., Crook, J., Horsnell, T., Rice, P., Rajandream, M.A., and Barrell, B. (2000) Artemis: sequence visualization and annotation. Bioinformatics 16: 944-945.
-
(2000)
Bioinformatics
, vol.16
, pp. 944-945
-
-
Rutherford, K.1
Parkhill, J.2
Crook, J.3
Horsnell, T.4
Rice, P.5
Rajandream, M.A.6
Barrell, B.7
-
40
-
-
0141676335
-
Novel proteorhodopsin variants from the Mediterranean and Red Seas
-
Sabehi, G., Massana, R., Bielawski, J.P., Rosenberg, M., Delong, E.F., and Beja, O. (2003) Novel proteorhodopsin variants from the Mediterranean and Red Seas. Environ Microbiol 5: 842-849.
-
(2003)
Environ Microbiol
, vol.5
, pp. 842-849
-
-
Sabehi, G.1
Massana, R.2
Bielawski, J.P.3
Rosenberg, M.4
Delong, E.F.5
Beja, O.6
-
41
-
-
4344584482
-
Different SAR86 subgroups harbour divergent proteorhodopsins
-
Sabehi, G., Beja, O., Suzuki, M.T., Preston, C.M., and DeLong, E.F. (2004) Different SAR86 subgroups harbour divergent proteorhodopsins. Environ Microbiol 6: 903-910.
-
(2004)
Environ Microbiol
, vol.6
, pp. 903-910
-
-
Sabehi, G.1
Beja, O.2
Suzuki, M.T.3
Preston, C.M.4
DeLong, E.F.5
-
42
-
-
23944505538
-
New insights into metabolic properties of marine bacteria encoding proteorhodopsins
-
Sabehi, G., Loy, A., Jung, K.-H., Partha, R., Spudich, J.L., Isaacson, T., et al. (2005) New insights into metabolic properties of marine bacteria encoding proteorhodopsins. PLoS Biol 3: e273.
-
(2005)
PLoS Biol
, vol.3
-
-
Sabehi, G.1
Loy, A.2
Jung, K.-H.3
Partha, R.4
Spudich, J.L.5
Isaacson, T.6
-
43
-
-
0028332220
-
Carotenoid biosynthesis in microorganisms and plants
-
Sandmann, G. (1994) Carotenoid biosynthesis in microorganisms and plants. Eur J Biochem 223: 7-24.
-
(1994)
Eur J Biochem
, vol.223
, pp. 7-24
-
-
Sandmann, G.1
-
44
-
-
0036896020
-
Molecular evolution of carotenoid biosynthesis from bacteria to plants
-
Sandmann, G. (2002) Molecular evolution of carotenoid biosynthesis from bacteria to plants. Physiol Planta 116: 431-440.
-
(2002)
Physiol Planta
, vol.116
, pp. 431-440
-
-
Sandmann, G.1
-
45
-
-
29144522344
-
Diversity of carotenoid synthesis gene clusters from environmental Enterobacteriaceae strains
-
Sedkova, N., Tao, L., Rouviere, P.E., and Cheng, Q. (2005) Diversity of carotenoid synthesis gene clusters from environmental Enterobacteriaceae strains. Appl Environ Microbiol 71: 8141-8146.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 8141-8146
-
-
Sedkova, N.1
Tao, L.2
Rouviere, P.E.3
Cheng, Q.4
-
46
-
-
0037173051
-
Two rhodopsins mediate phototaxis to low- and highintensity light in Chlamydomonas reinhardtii
-
Sineshchekov, O.A., Jung, K.-H., and Spudich, J.L. (2002) Two rhodopsins mediate phototaxis to low- and highintensity light in Chlamydomonas reinhardtii. Proc Natl Acad Sci USA 99: 8689-8694.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 8689-8694
-
-
Sineshchekov, O.A.1
Jung, K.-H.2
Spudich, J.L.3
-
47
-
-
0034519206
-
Retinylidene proteins: Structures and functions from archaea to humans
-
Spudich, J.L., Yang, C.S., Jung, K.H., and Spudich, E.N. (2000) Retinylidene proteins: structures and functions from archaea to humans. Annu Rev Cell Dev Biol 16: 365-392.
-
(2000)
Annu Rev Cell Dev Biol
, vol.16
, pp. 365-392
-
-
Spudich, J.L.1
Yang, C.S.2
Jung, K.H.3
Spudich, E.N.4
-
48
-
-
0035208354
-
Phylogenetic analysis of ribosomal RNA operons from uncultivated coastal marine bacterioplankton
-
Suzuki, M.T., Beja, O., Taylor, L.T., and DeLong, E.F. (2001) Phylogenetic analysis of ribosomal RNA operons from uncultivated coastal marine bacterioplankton. Environ Microbiol 3: 323-331.
-
(2001)
Environ Microbiol
, vol.3
, pp. 323-331
-
-
Suzuki, M.T.1
Beja, O.2
Taylor, L.T.3
DeLong, E.F.4
-
49
-
-
12244263975
-
Phylogenetic screening of ribosomal RNA gene-containing clones in bacterial artificial chromosome (BAC) libraries from different depths in Monterey Bay
-
Suzuki, M.T., Preston, C.M., Beja, O., de la Torre, J.R., Steward, G.F., and DeLong, E.F. (2004) Phylogenetic screening of ribosomal RNA gene-containing clones in bacterial artificial chromosome (BAC) libraries from different depths in Monterey Bay. Microb Ecol 48: 473-488.
-
(2004)
Microb Ecol
, vol.48
, pp. 473-488
-
-
Suzuki, M.T.1
Preston, C.M.2
Beja, O.3
de la Torre, J.R.4
Steward, G.F.5
DeLong, E.F.6
-
50
-
-
33645464254
-
RibAlign: A software tool and database for eubacterial phylogeny based on concatenated ribosomal protein subunits
-
Teeling, H., and Gloeckner, F.O. (2006) RibAlign: a software tool and database for eubacterial phylogeny based on concatenated ribosomal protein subunits. BMC Bioinformatics 7: 66.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 66
-
-
Teeling, H.1
Gloeckner, F.O.2
-
51
-
-
0242331634
-
Proteorhodopsin genes are distributed among divergent marine bacterial taxa
-
de la Torre, J.R., Christianson, L.M., Beja, O., Suzuki, M.T., Karl, D.M., Heidelberg, J., and DeLong, E.F. (2003) Proteorhodopsin genes are distributed among divergent marine bacterial taxa. Proc Natl Acad Sci USA 100: 12830-12835.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 12830-12835
-
-
de la Torre, J.R.1
Christianson, L.M.2
Beja, O.3
Suzuki, M.T.4
Karl, D.M.5
Heidelberg, J.6
DeLong, E.F.7
-
52
-
-
11144354360
-
Environmental genome shotgun sequencing of the Sargasso Sea
-
Venter, J.C., Remington, K., Heidelberg, J.F., Halpern, A.L., Rusch, D., Eisen, J.A., et al. (2004) Environmental genome shotgun sequencing of the Sargasso Sea. Science 304: 66-74.
-
(2004)
Science
, vol.304
, pp. 66-74
-
-
Venter, J.C.1
Remington, K.2
Heidelberg, J.F.3
Halpern, A.L.4
Rusch, D.5
Eisen, J.A.6
-
53
-
-
0035085816
-
Genome alignment, evolution of prokaryotic genome organization, and prediction of gene function using genomic context
-
Wolf, Y.I., Rogozin, I.B., Kondrashov, A.S., and Koonin, E.V. (2001) Genome alignment, evolution of prokaryotic genome organization, and prediction of gene function using genomic context. Genome Res 11: 356-372.
-
(2001)
Genome Res
, vol.11
, pp. 356-372
-
-
Wolf, Y.I.1
Rogozin, I.B.2
Kondrashov, A.S.3
Koonin, E.V.4
|