Temporal changes in allele frequencies in two European F2 flint maize populations under modified recurrent full-sib selection

Theoretical and Applied Genetics

Volumn 114, Issue 5, 2007, Pages 765-776

  Falke, K C ^a   Flachenecker, C ^a   Melchinger, A E ^a   Piepho, H P ^a   Maurer, H P ^a   Frisch, M ^a  

^a UNIVERSITY OF HOHENHEIM   (Germany)

Author keywords

Allele frequency changes; Random genetic drift; Recurrent selection; SSR; Zea mays L.

Indexed keywords

BIOASSAY; CROPS; DNA SEQUENCES;

ALLELE FREQUENCIES; GENETIC DRIFT; GENETIC EFFECTS; RESTRICTION FRAGMENT LENGTH POLYMORPHISMS (RFLP);

GENES;

ALLELE; ARTICLE; BIOLOGICAL MODEL; BREEDING; CLASSIFICATION; EUROPE; GENE; GENE FREQUENCY; GENETIC DRIFT; GENETIC LINKAGE; GENETIC MARKER; GENETIC SELECTION; GENETICS; MAIZE; QUANTITATIVE TRAIT LOCUS;

ALLELES; BREEDING; EUROPE; GENE FREQUENCY; GENES, PLANT; GENETIC DRIFT; GENETIC MARKERS; LOD SCORE; MODELS, GENETIC; QUANTITATIVE TRAIT LOCI; SELECTION (GENETICS); ZEA MAYS;

CORN; GENES;

ZEA MAYS;

EID: 33847347705     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-006-0443-7     Document Type: Article

References (40)

1. Bernardo R (2002) Breeding for quantitative traits in plants. Stemma, Woodbury
2. Bernardo R, Romero-Severson J, Ziegle J, Hauser J, Joe L, Hookstra G, Doerge RW (2000) Parental contribution and coefficient of coancestry among maize inbreds: Pedigree, RFLP, and SSR data. Theor Appl Genet 100:552-556
3. Brown AHD, Allard RW (1971) Effect of reciprocal recurrent selection for yield on isozyme polymorphisms in maize (Zea mays L.). Crop Sci 11:888-893
4. Charbonnel N, Rasatavonjizay R, Sellin E, Bremond P, Jarne P (2005) The influence of genetic factors and population dynamics on the mating system of the hermaphroditic freshwater snail Biomphalaria pfeifferi. Oikos 108:283-296
5. Cockerham CC, Burrows PM (1980) Selection limits and strategies. Proc Natl Acad Sci USA 77:546-549
6. Coque M, Gallais A (2006) Genomic regions involved in response to grain yield selection at high and low nitrogen fertilization in maize. Theor Appl Genet 112:1205-1220
7. 2 and three times intermated generations in two populations of European flint maize (Zea mays L.). Theor Appl Genet 113:857-866
8. 2 maize population under modified recurrent full-sib selection. Theor Appl Genet 112:483-491
9. 2 maize population. Plant Breed 125:248-253
10. 2 populations of European flint maize. Theor Appl Genet 113:1113-1120
11. Guzman PS, Lamkey KR (1999) Predicted gains from recurrent selection in the BS11 maize population. Maydica 44:93-99
12. Guzman PS, Lamkey KR (2000) Effective population size and genetic variability in the BS11 maize population. Crop Sci 40:338-346
13. Haldane JBS (1919) The combination of linkage values, and the calculation of distance between the loci of linked factors. J Genet 8:299-309
14. Haley CS, Knott SA (1992) A simple regression method for mapping quantitative trait loci in line crosses using flanking markers. Heredity 69:315-324
15. Hallauer AR (1985) Compendium on recurrent selection methods and their application. Crit Rev Plant Sci 3:1-33
16. Hallauer AR, Miranda JBF (1988) Quantitative genetics in maize breeding, 2nd edn. Iowa State University Press, Ames
17. Hartl DL, Clark AG (1997) Principles of population genetics. Sinauer Associates, Sunderland
18. Heredia-Diaz O, Alsirt A, Darrah LL, Coe EH (1996) Allelic frequency changes in the MoSCSSS maize synthetic in response to bi-directional recurrent selection for rind penetrometer resistance. Maydica 41:65-76
19. Hospital F, Chevalet C (1996) Interactions of selection, linkage and drift in the dynamics of polygenic characters. Genet Res Camb 67:77-87
20. Jansen RC, Stam P (1994) High resolution of quantitative traits into multiple loci via interval mapping. Genetics 136:1447-1455
21. Kahler AL (1983) Effect of half-sib and S1 recurrent selection for increased grain yield on allozyme polymorphisms in maize (Zea mays L.). Crop Sci 23:572-576
22. Labate JA, Lamkey KR, Lee M, Woodman WL (1999) Temporal changes in allele frequencies in two reciprocally selected maize populations. Theor Appl Genet 99:1166-1178
23. Lande R, Thompson R (1990) Efficiency of marker-assisted selection in the improvement of quantitative traits. Genetics 124:743-756
24. Lander ES, Botstein D (1989) Mapping mendelian factors underlying quantitative traits using RFLP linkage maps. Genetics 121:185-199
25. Lübberstedt T, Melchinger AE, Fähr S, Klein D, Dally A, Westhoff P (1998) QTL mapping in testcrosses of flint lines of maize: III. Comparison across populations for forage traits. Crop Sci 38:1278-1289
26. Melchinger AE, Utz HF, Schön CC (1998) Quantitative trait locus (QTL) mapping using different testers and independent population samples in maize reveals low power of QTL detection and large bias in estimates of QTL effects. Genetics 149:383-403
27. Mihaljevic R, Schön CC, Utz HF, Melchinger AE (2005) Correlations and QTL correspondence between line per se and testcross performance for agronomic traits in four populations of European maize. Crop Sci 45:114-122
28. Miller AJ (1990) Subset selection in regression. Chapman and Hall, London
29. Patterson HD, Williams ER (1976) A new class of resolvable incomplete block designs. Biometrica 63:83-92
30. Pinto LR, Carneiro Vieira ML, de Souza CL Jr, de Souza AP (2003) Reciprocal recurrent selection effects on the genetic structure of tropical maize populations assessed at microsatellite loci. Genet Mol Biol 26:355-364
31. Queney G, Ferrand N, Marchandeau S, Azevedo M, Mougel F, Branco M, Monnerot M (2000) Absence of a genetic bottleneck in a wild rabbit (Oryctolagus cuniculus) population exposed to a severe viral epizootic. Mol Ecol 9:1253-1264
32. R Development Core Team (2004) R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna
33. Schön CC, Melchinger AE, Boppenmaier J, Brunklaus-Jung E, Herrmann RG, Seitzer JF (1994) RFLP mapping in maize: Quantitative trait loci affecting testcross performance of elite European flint lines. Crop Sci 34:378-389
34. Smith OS (1979) A model for evaluating progress from recurrent selection. Crop Sci 19:223-226
35. Stuber CW, Moll RH, Goodman MM, Schaffer HE, Weir BS (1980) Allozyme frequency changes associated with selection for increased grain yield in maize (Zea mays L.). Genetics 95:225-236
36. Utz HF (2001) PLABSTAT: a computer program for the statistical analysis of plant breeding experiments. Institute for Plant Breeding, Seed Science and Population Genetics, University of Hohenheim, Stuttgart
37. Utz HF, Melchinger AE (1996) PLABQTL: a program for composite interval mapping of QTL. J Quant Trait Loci 2 (1). Available at http://www.uni-hohenheim. de/~ipspwww/soft.html (verified 10 Sept. 2004)
38. Utz HF, Melchinger AE, Schön CC (2000) Bias and sampling error of the estimated proportion of genotypic variance explained by quantitative trait loci determined from experimental data in maize using cross validation and validation with independent samples. Genetics 154:1839-1849
39. Van Ooijen JW, Voorrips RE (2001) JoinMap Version 3.0 software for the calculation of genetic linkage maps. Plant Research International, Wageningen
40. Waples RS (1989) Temporal variation in allele frequencies: Testing the right hypothesis. Evolution 43:1236-1251