The automation of Nested Clade Phylogeographic Analysis

Bioinformatics

Volumn 23, Issue 4, 2007, Pages 509-510

  Panchal, Mahesh ^a  

^a UNIVERSITY OF READING   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ACCESS TO INFORMATION; ARTICLE; AUTOMATION; CLADISTICS; COMPUTER PROGRAM; DEMOGRAPHY; EVOLUTION; GENE SEQUENCE; GENETIC POLYMORPHISM; GEOGRAPHY; INTERNET; PHYLOGENY; PHYLOGEOGRAPHY; POPULATION STRUCTURE; PRIORITY JOURNAL;

EID: 33847255037     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/btl614     Document Type: Article

References (8)

1. Clement,M., Posada,D. and Crandall,K.A. (2000) TCS: A computer program to estimate gene genealogies. Mol. Ecol., 9, 1657-1659.
2. Knowles,L.L. and Maddison,W.P. (2002) Statistical phylogeography. Mol. Ecol., 11, 2623-2635.
3. Posada,D., Crandall,K.A. and Templeton,A.R. (2000) GeoDis: A program for the cladistic nested analysis of the geographical distribution of genetic haplotypes. Mol. Ecol., 9, 487-488.
4. Posada,D., Crandall,K.A. and Templeton,A.R. (2006) Nested clade analysis statistics. Mol. Ecol. Notes, 6, 590-593.
5. Templeton,A.R., Crandall,K.A. and Sing,C.F. (1992) A Cladistic analysis of Phenotypic Associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. 3. cladogram estimation. Genetics, 132, 619-633.
6. Templeton,A.R., Routman,E. and Phillips,C.A. (1995) Separating population structure from population history: A cladistic analysis of the geographical distribution of mitochondrial DNA haplotypes in the tiger salamander, ambystoma tigrinum. Genetics, 140, 767-782.
7. Templeton,A.R. (2004) Statistical phylogeography: Methods of evaluating and minimizing inference errors. Mol. Ecol., 13, 789-809.
8. Zhang,A.-B., Tan,S. and Sota,T. (2006) Autoinfer 1.0: A computer program to infer biogeographical events automatically. Mol. Ecol. Notes, 6, 597-599.