Characterization of a polycyclic aromatic hydrocarbon-degrading microbial consortium from a petrochemical sludge landfarming site

Bioremediation Journal

Volumn 11, Issue 1, 2007, Pages 1-11

  Jacques, Rodrigo J S ^a   Okeke, Benedict C ^b   Bento, Fatima M ^a   Peralba, Maria C R ^a   Camargo, Flávio A O ^a  

^a FEDERAL UNIVERSITY OF RIO GRANDE DO SUL   (Brazil)

^b AUBURN UNIVERSITY AT MONTGOMERY   (United States)

Author keywords

Anthracene; Biosurfactant; Degradation; Microbial consortium; Phenanthrene; Pyrene

Indexed keywords

1-DECENE; 1-OCTENE; 16S RRNA; ALIPHATIC HYDROCARBONS; BIO SURFACTANT; BIOSURFACTANT PRODUCTION; BIOTREATMENTS; CARCINOGENIC PROPERTIES; DEGRADATION RATE; DIESEL OIL; DIHYDROXYBENZOIC ACIDS; EMULSIFICATION INDEX; ENRICHMENT CULTURE; FUSARIUM OXYSPORUMS; GORDONIA; HYDROCARBON MIXTURE; LAND-FARMING; MICROBACTERIUM SP; MICROBIAL CONSORTIA; MICROBIAL DEGRADATION; PETROCHEMICAL SLUDGE; PHENANTHRENE; POLYCYCLIC AROMATIC HYDROCARBONS(PAHS); POLYCYCLIC AROMATICS; SALICYLIC ACIDS; SOIL AND WATER; SOIL SAMPLE; WIDE SPECTRUM;

BACTERIA; BENZENE; BIODEGRADATION; BIOMOLECULES; BOTTLES; CARBON DIOXIDE; DEGRADATION; DIESEL FUELS; EMULSIFICATION; ETHANOL; ETHYLBENZENE; HEXANE; MINERALS; ORGANIC COMPOUNDS; PETROCHEMICALS; PHENOLS; PYRENE; RNA; SOIL SURVEYS; SOILS; SURFACE ACTIVE AGENTS; SURFACE TENSION; TOLUENE; XYLENE;

ANTHRACENE;

EID: 33847240147     PISSN: 10889868     EISSN: 15476529     Source Type: Journal    
DOI: 10.1080/10889860601185822     Document Type: Article

References (40)

1. Aislabie, J., J. Foght, and D. Saul. 2000. Aromatic hydrocarbon-degrading bacteria from soil near Scott Base, Antartica. Polar Biol. 23:183-188. (Pubitemid 30146909)
2. Alef, K. 1995. Estimation of microbial activities. In: Methods in applied soil microbiology and biochemistry, eds. K. Alef and P. Nanipieri, 193-270. San Diego: Academic Press.
3. Altschul, S. F., T.I.Madden, A. A. Schaffer, J. H. Zhang, Z. Zhang,W. Miller, and W. Lipman. 1997. http://wos.isiknowledge.com/CIW.cgi?SID= V25JP878D4MJGPEb8bh&Func=OneClickSearch&field=AU&val= Lipman+DJ&currdoc=10/19&Form=FullRecordPage&doc=10/19 Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402. (Pubitemid 27359211)
4. Asubel, F. M., R. Brent, R. E. Kingston, D. D. Moore, J. G. Seidman, J. A. Smith, and K. Struhl (eds.) 1997. Current protocols in molecular biology. New York: John Wiley and Sons.
5. Berekaa, M. M., and A. Steinbüchel chel. 2000. Microbial degradation of the multiply branched alkane 2,6,10,15,19,23-hexamethyltetracosane (squalene) by Mycobacterium fortuitum and Mycobacterium ratisbonense. Appl. Environ. Microbiol. 66:4462-4467.
6. Boonchan, S, M. L. Britz, and G.A. Stanley. 2000. Degradation and mineralization of high-molecular-weight polycyclic aromatic hydrocarbons by defined fungal-bacterial cocultures. Appl. Environ. Microbiol. 66:1007-1019. (Pubitemid 30130020)
7. Boopathy, R. 2000. Factors limiting bioremediation technologies. Bioresour. Technol. 74:63-67. (Pubitemid 30190278)
8. ++. Appl. Microbiol. Biotechnol. 62:569-573. (Pubitemid 37372453)
9. Cameotra, S., and J. M. Bollag. 2003. Biosurfactant-enhanced bioremediation of polycyclic aromatic hydrocarbons. Crit. Rev. Env. Sci. Technol. 30:111-126. (Pubitemid 36569923)
10. Cavalca L., E. Dell'amico, and V. Andreoni. 2004. Intrinsic bioremediability of an aromatic hydrocarbon-polluted groundwater: Diversity of bacterial population and toluene monoxygenase genes. Appl. Microbiol. Biotechnol. 64:576-587.
11. Cerniglia, C. E. 1984. Microbial metabolism of polycyclic aromatic hydrocarbons. Adv. Appl. Microbiol. 30:31-71.
12. Cerniglia, C. E. 1997. Fungal metabolism of polycyclic aromatic hydrocarbons: Past, present and future applications in bioremediation. J. Ind. Microbiol. Biotechnol. 19:324-333. (Pubitemid 28025377)
13. Chaillan, F., L. E. A. Fleche, E. Bury, Y. H. Phantavong, P. Grimont, A. Saliot, and J. Oudot. 2004. Identification and biodegradation potential of tropical aerobic hydrocarbon-degrading microorganisms. Res. Microbiol. 155:587-595. (Pubitemid 39094212)
14. Cybulski, Z., E. Dziurla, E. Kaczorek, and A. Olszanowski. 2003. The influence of emulsifiers on hydrocarbon biodegradation by Pseudomonadaceae and Bacillacea strains. Spill Sci. Tech. Bull. 8:503-507. (Pubitemid 37160259)
15. Gauthier, E, E. Deziel, R. Villemur, P. Juteau, F. Lepine, and R. Beaudet. 2003. Initial characterization of new bacteria degrading highmolecular weight polycyclic aromatic hydrocarbons isolated from a 2-year enrichment in a two-liquid-phase culture system. J. Appl. Microbiol. 94:301-311. (Pubitemid 36120956)
16. Ghazali, F. M., R. N. Z. A. Rahman, A. B. Salleh, and M. Basri. 2004. http://wos.isiknowledge.com/CIW.cgi?SID=V25JP878D4MJGPEb8bh&Func= OneClickSearch&field=AU&val=Basri+M&curr doc=23/1&Form= FullRecordPage&doc=23/1 Biodegradation of hydrocarbonsin soil by microbial consortium. Int. Biodeterior. Biodegrad. 54:61-67. (Pubitemid 38498087)
17. Huesemann, M. H. E., T. S. E. Hausmann, and T. H. E. Fortman. 2002. Microbial factors rather than bioavailability limit the rate and extent of PAH biodegradation in aged crude oil contaminated model soils. Biorem. J. 6:321-336.
18. Jacques, R.J.S., E.C.Santos, F.M.Bento, M.C.R.Peralba, P.A.Selbach, E.L.S.Sá , and F.A.O.Camargo.2005.Anthracene biodegradation by Pseudomonas sp isolated from a Petrochemical Sludge Landfarming.Int. Biodeterior. Biodegrad.56:143-150. (Pubitemid 41456698)
19. Johnsen, A.R., L.Y.Wick, and H.Harms.2005.Principles of microbial PAH-degradation in soil.Environ. Pollut.133:71-84. (Pubitemid 41569171)
20. Johnsen, A.R., and U.Karlson.2004.Evaluation of bacterial strategies to promote the bioavailability of polycyclic aromatic hydrocarbons.Appl. Microbiol. Biotechnol. 63:452-459. (Pubitemid 38134784)
21. Kastner, M. , M. Breuerjammali, and B. Mahro. 1994. Enumeration and characterization of the soil microflora from hydrocarboncontaminated soil sites able to mineralize polycyclic aromatic hydrocarbons (PAH). Appl. Microbiol. Biotechnol. 41:267-273. (Pubitemid 24162379)
22. Kazunga, C. , and M. D. Aitken. 2000. Products from incomplete metabolism of pyrene by polycyclic aromatic hydrocarbondegrading bacteria. Appl. Environ. Microbiol. 66:1917-1922. (Pubitemid 30253711)
23. Kiyohara, H. , K. Nagao, and K. Yana. 1982. Rapid screen for bacteria degrading water-insoluble, solid hydrocarbons on agar plates. Appl. Environ. Microbiol. 43:454-457. (Pubitemid 12104891)
24. Kumar, S. , K. Tamura, and M. Nei. 2004. MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief. Bioinform. 5:150-163.
25. Leys, N. M. , L. Bastiaens,W. Verstraete, and D. Springael. 2005. Influence of the carbon/nitrogen/phosphorus ratio on polycyclic aromatic hydrocarbon degradation by Mycobacterium and Sphingomonas in soil. Appl. Environ. Microbiol. 66:726-736. (Pubitemid 40392428)
26. Linos, A. , M. M. Berekaa, R. Reichelt, U. Keller, J. Schmitt, H. -C. Flemming, R. M. Kroppenstedt, and A. Steinbuchel. 2000. Biodegradation of cis-1,4-polyisoprene rubbers by distinct actinomycetes: Mycrobial strategies and detailed surface analysis. Appl. Environ. Microbiol. 66:1639-1645. (Pubitemid 30185644)
27. Maier, R. 2003. Biosurfactants: Evolution and diversity in bacteria. Adv. Appl. Microbiol. 52:101-121. (Pubitemid 37012795)
28. Miyata, N. , K. Iwahori, J. M. Foght, and M. R. Gray. 2004. Saturable, energy-dependent uptake of phenanthrene in aqueous phase by Mycobacterium sp. Strain RJGII-153. Appl. Environ. Microbiol. 70:363-369. (Pubitemid 38090226)
29. Mutnuri, S. , N. Vasudevan, and M. Kastner. 2005. Degradation of anthracene and pyrene supplied by microcrystals and non-aqueousphase liquids. Appl. Microbiol. Biotechnol. 67:569-576. (Pubitemid 40909604)
30. Samanta, S. K. , O. V. Singh, and R. K. Jain. 2002. Polycyclic aromatic hydrocarbons: Environmental pollution and bioremediation. Trends Biotechnol. 20:243-248. (Pubitemid 34451059)
31. Schabereiter-Gurtner, C. , G. Piñar, W. Lubitz, and S. Rölleke. 2001. Analysis of fungal communities on historical church window glass by denaturing gradient gel electrophoresis and phylogenitic 18S rDNA sequence analysis. J. Microbiol. Methods 47:345-354. (Pubitemid 33063652)
32. Schippers, A. , K. Bosecker, C. Sproer, and P. Schumann. 2005. Microbacterium oleivorans sp nov and Microbacterium hydrocarbon oxydans sp nov. , novel crude-oil-degrading gram-positive bacteria. Int. J. Syst. Evol. Microbiol. 55:655-660. (Pubitemid 40485048)
33. Shuttleworth, K. L. , and C. E. Cerniglia. 1996. Practical methods fore the isolation of polycyclic aromatic hydrocarbon (PAH) degrading microrganisms and biodegradation intermediates. In: Manual of environmental microbiology, ed. J. Hurst, G. R. Knudsen, M. J. Mcinerney, L. D. Stetzenbach, and M. V. Walter, 766-775. Washington, DC: ASM.
34. Stotzky, G. 1965. Microbial respiration. In: Methods in soil analisys, ed. C. A. Black, 1550-1572. Madison, WI: SSSA.
35. Van Veen, J. A. , L. S. van Overbeek, and J. D. van Elsas. 1997. Fate and activity of microorganisms introduced into soil. Microbiol. Mol. Biol. Rev. 61:121-135. (Pubitemid 27283797)
36. Verdin, A. , A. L. H. Sahraoui, and R. Durand. 2004. Degradation fo benzo[a]pyrene by mitosporic fungi and extracellular oxidative enzymes. Int. Biodeterior. Biodegrad. 53:65-70.
37. Verdin, A. , A. L. H. Sahraoui, G. Robinson, and R. Durand. 2005. Effect of the polycyclic aromatic hydrocarbon, benzo[a]pyrene, on the intracellular protein composition of Fusarium solani and Fusarium oxysporum. Int. Biodeterior. Biodegrad. 55:171-174. (Pubitemid 40428051)
38. Verschueren, K. 2001. Handbook of environmental data of organic chemicals, 4th ed. Chichester: Wiley.
39. Wick, L. Y. , A. R. De Munain, D. Springael, and H. Harms. 2002. Responses of Mycobacterium sp. LB501T to the low bioavailability of solid anthracene. Appl. Environ. Microbiol. 58:378-385. (Pubitemid 34185584)
40. Zhang, H. J. , A. J. Kallimanis, A. I. J. Koukkou, and C. J. Drainas. 2004. Isolation and characterization of novel bacteria degrading polycyclic aromatic hydrocarbons from polluted Greek soils. Appl. Microbiol. Biotechnol. 65:124-131.