Alteration of iron-rich lacustrine sediments by dissimilatory iron-reducing bacteria

Geobiology

Volumn 5, Issue 1, 2007, Pages 63-73

  Crowe, S A ^a,c   Roberts, J A ^c   Weisener, C G ^a,b   Fowle, D A ^a,c  

^a UNIVERSITY OF WINDSOR   (Canada)

^b UNIVERSITY OF WINDSOR   (Canada)

^c UNIVERSITY OF KANSAS   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOGEOCHEMISTRY; CHEMICAL ALTERATION; GOETHITE; IRON; IRON-REDUCING BACTERIUM; LACUSTRINE DEPOSIT; MICROBIAL ACTIVITY; MOBILITY; NUTRIENT; ORGANIC MATTER; REDUCTION; SEDIMENTARY ROCK; TRACE METAL;

ASIA; EURASIA; INDONESIA; LAKE MATANO; MALILI LAKES; SOUTH SULAWESI; SOUTHEAST ASIA;

BACTERIA (MICROORGANISMS); SHEWANELLA PUTREFACIENS;

EID: 33847208178     PISSN: 14724677     EISSN: 14724669     Source Type: Journal    
DOI: 10.1111/j.1472-4669.2006.00086.x     Document Type: Article

References (52)

1. Ainsworth CC, Zachara JM, Smith SC (1989) Carbazole sorption by surface and subsurface materials - influence of sorbent and solvent properties. Soil Science Society of America Journal 53, 1391-1401.
2. Benner SG, Hansel CM, Wielinga BW, Barber TM, Fendorf S (2002) Reductive dissolution and biomineralization of iron hydroxide under dynamic flow conditions. Environmental Science and Technology 36, 1705-1711.
3. Bennett PC, Engel AS, Roberts JA (2006) Counting and imaging bacteria on mineral surfaces. In Methods of Investigating Microbial-Mineral Interactions, CMS Workshop Lectures (eds. Maurice JPA, Warren A). The Clay Mineral Society, Chantilly, Vol. 14, 37-78.
4. Bostrom B, Andersen JM, Fleischer S, Jansson M (1988) Exchange of phosphorus across the sediment-water interface. Hydrobiologia 170, 229-244.
5. Bousserrhine N, Gasser UG, Jeanroy E, Berthelin J (1999) Bacterial and chemical reductive dissolution of Mn-, Co-, Cr-, and Al-substituted goethites. Geomicrobiology Journal 16, 245-258.
6. 2, and S(-II) in porewaters of marine and fresh-water sediments. Environmental Science and Technology 29, 751-761.
7. Carey E, Taillefert M (2005) The role of soluble Fe(III) in the cycling of iron and sulfur in coastal marine sediments. Limnology and Oceanography 50, 1129-1141.
8. Cornell RM, Schwertmann U (1996) The Iron Oxides: Structure, Properties, Reactions, Occurrences and Uses. Wiley VCH, Weinheim, Germany.
9. Crowe SA, Pannalal SJ, Fowle DA, Cioppa MT, Symons DTA, Haffner GD, Fryer BJ, McNeely R, Sundby B, Hehanussa PE (2004) Biogeochemical cycling in Fe-rich sediments from Lake Matano, Indonesia. 13th International Symposium on Water-Rock Interaction, 1185-1189.
10. Cummings DE, Caccavo F, Fendorf S, Rosenzweig RF (1999) Arsenic mobilization by the dissimilatory Fe(III)-reducing bacterium Shewanella alga BrY. Environmental Science and Technology 33, 723-729.
11. Fredrickson JK, Zachara JM, Kukkadapu RK, Gorby YA, Smith SC, Brown CF (2001) Biotransformation of Ni-substituted hydrous ferric oxide by an Fe(III)-reducing bacterium. Environmental Science and Technology 35, 703-712.
12. Gerth J (1990) Unit-cell dimensions of pure and trace metal-associated goethites. Geochimica et Cosmochimica Acta 54, 363-371.
13. Golightly JP (1981) Nickeliferous laterite deposits. Economic Geology 75th Anniversary Volume, 710-735.
14. Gorby YA, Yanina S, McLean JS, Rosso KM, Moyles D, Dohnalkova A, Beveridge TJ, Chang IS, Kim BH, Kim KS, Culley DE, Reed SB, Romine MF, Saffarini DA, Hill EA, Shi L, Elias DA, Kennedy DW, Pinchuk G, Watanabe K, Ishii S, Logan B, Nealson KH, Fredrickson JK (2006) Electrically conductive bacterial nanowires produced by Shewanella oneidensis strain MR-1 and other microorganisms. Proceedings of the National Academy of Sciences of the United States of America 103, 11358-11363.
15. Grantham MC, Dove PM, DiChristina TJ (1997) Microbially catalyzed dissolution of iron and aluminium oxyhydroxide mineral surface coatings. Geochimica et Cosmochimica Acta 61, 4467-4477.
16. Hamilton-Taylor J, Davison W (1995) Redox-driven cycling of trace elements in lakes. In Physics and Chemistry of Lakes (eds Lerman A, Imboden D, Gat J). Springer-Verlag, Berlin, Germany, pp. 217-263.
17. Hansel CM, Wielinga BW, Fendorf SR (2003) Structural and compositional evolution of Cr/Fe solids after indirect chromate reduction by dissimilatory iron-reducing bacteria. Geochimica et Cosmochimica Acta 67, 401-412.
18. Hering JG, Stumm W (1990) Oxidative and reductive dissolution of minerals. Reviews in Mineralogy 23, 427-465.
19. Heron G, Christensen TH (1995) Impact of sediment-bound iron on redox buffering in a landfill leachate polluted aquifer (Vejen, Denmark). Environmental Science and Technology 29, 187-192.
20. Kukkadapu RK, Zachara JM, Smith SC, Fredrickson JK, Liu CX (2001) Dissimilatory bacterial reduction of Al-substituted goethite in subsurface sediments. Geochimica et Cosmochimica Acta 65 (17), 2913-2924.
21. Landa ER, Phillips EJP, Lovley DR (1991) Release of Ra-226 from uranium mill tailings by microbial Fe(iii) reduction. Applied Geochemistry 6, 647-652.
22. Larsen I, Little B, Nealson KH, Ray R, Stone A, Tian JH (1998) Manganite reduction by Shewanella putrefaciens MR-4. American Mineralogist 83, 1564-1572.
23. van der Lee J (1993) CHESS, Another Speciation and Surface Complexation Computer Code. CIG-Ecole des Mines de Paris, Fountainebleau, France.
24. Little BJ, Wagner PA, Lewandowski Z (1997) Spatial relationships between bacteria and mineral surfaces. Geomicrobiology: Interactions Between Microbes and Minerals 35, 123-159.
25. Lovley DR (1991) Dissimilatory Fe(III) and Mn(IV) Reduction. Microbiological Reviews 55, 259-287.
26. Lovley DR, Stolz JF, Nord GL, Phillips EJP (1987) Anaerobic production of magnetite by a dissimilatory iron-reducing microorganism. Nature 330, 252-254.
27. Lovley DR, Holmes DE, Nevin KP (2004) Dissimilatory Fe(III) and Mn(IV) reduction. Advances in Microbial Physiology 49, 219-286.
28. Michalopoulos P, Aller RC (2004) Early diagenesis of biogenic silica in the Amazon delta: alteration, authigenic clay formation, and storage. Geochimica et Cosmochimica Acta 68, 1061-1085.
29. Neaman A, Waller B, Mouele F, Trolard F, Bourrie G (2004) Improved methods for selective dissolution of manganese oxides from soils and rocks. European Journal of Soil Science 55, 47-54.
30. Nevin KP, Lovley DR (2002) Mechanisms for Fe(III) oxide reduction in sedimentary environments. Geomicrobiology Journal 19, 141-159.
31. Perret D, Gaillard JF, Dominik J, Atteia O (2000) The diversity of natural hydrous iron oxides. Environmental Science and Technology 34, 3540-3546.
32. Poulton SW, Canfield DE (2005) Development of a sequential extraction procedure for iron: implications for iron partitioning in continentally derived particulates. Chemical Geology 214, 209-221.
33. Quantin C, Becquer T, Rouiller JH, Berthelin J (2001) Oxide weathering and trace metal release by bacterial reduction in a New Caledonia Ferralsol. Biogeochemistry 53, 323-340.
34. Quantin C, Becquer T, Berthelin J (2002) Mn-oxide: a major source of easily mobilisable Co and Ni under reducing conditions in New Caledonia Ferralsols. Comptes Rendus Geoscience 334, 273-278.
35. Reguera G, McCarthy KD, Mehta T, Nicoll JS, Tuominen MT, Lovley DR (2005) Extracellular electron transfer via microbial nanowires. Nature 435, 1098-1101.
36. Roden EE (2003) Fe(III) oxide reactivity toward biological versus chemical reduction. Environmental Science and Technology 37, 1319-1324.
37. Roden EE (2004) Analysis of long-term bacterial vs. chemical Fe(III) oxide reduction kinetics. Geochimica et Cosmochimica Acta 68, 3205-3216.
38. Roden EE, Zachara JM (1996) Microbial reduction of crystalline iron(III) oxides: Influence of oxide surface area and potential for cell growth. Environmental Science and Technology 30, 1618-1628.
39. Sarazin G, Michard G, Prevot F (1999) A rapid and accurate spectroscopic method for alkalinity measurements in sea water samples. Water Research 33, 290-294.
40. Schwertmann U (1991) Solubility and dissolution of iron-oxides. Plant and Soil 130, 1-25.
41. Stipp SLS, Hansen M, Kristensen R, Hochella MF, Bennedsen L, Dideriksen K, Balic-Zunic T, Leonard D, Mathieu HJ (2002) Behaviour of Fe-oxides relevant to contaminant uptake in the environment. Chemical Geology 190, 321-337.
42. Taillefert M, Bono AB, Luther GW (2000) Reactivity of freshly formed Fe(III) in synthetic solutions and (pore) waters: Voltammetric evidence of an aging process. Environmental Science and Technology 34, 2169-2177.
43. Tessier A, Fortin D, Belzile N, DeVitre RR, Leppard GG (1996) Metal sorption to diagenetic iron and manganese oxyhydroxides and associated organic matter: narrowing the gap between field and laboratory measurements. Geochimica et Cosmochimica Acta 60, 387-404.
44. Torrent J, Schwertmann U, Barron V (1987) The reductive dissolution of synthetic goethite and hematite in dithionite. Clay Minerals 22, 329-337.
45. Trolard F, Tardy Y (1987) The stabilities of gibbsite, boehmite, aluminous goethites and aluminous hematites in bauxites, ferricretes and laterites as a function of water activity, temperature and particle-size. Geochimica et Cosmochimica Acta 51, 945-957.
46. Urrutia MM, Roden EE, Zachara JM (1999) Influence of aqueous and solid-phase Fe (II) complexants on microbial reduction of crystalline iron(III) oxides. Environmental Science and Technology 33, 4022-4028.
47. Viollier E, Inglett PW, Hunter K, Roychoudhury AN, Van Cappellen P (2000) The ferrozine method revisited: Fe(II)/Fe(III) determination in natural waters. Applied Geochemistry 15, 785-790.
48. Walker JCG, Klein C, Schidlowski M, Schopf JW, Stevensen DJ, Walter MR (1983) Environmental evolution of the Archean-Early Proterozoic Earth. In Earth's Earliest Biosphere (ed. Schoft JW). Princeton University Press, Princeton, New Jersey, pp. 260-290.
49. Welch SA, Barker WW, Banfield JF (1999) Microbial extracellular polysaccharides and plagioclase dissolution. Geochimica et Cosmochimica Acta 63, 1405-1419.
50. Zachara JM, Fredrickson JK, Li SM, Kennedy DW, Smith SC, Gassman PL (1998) Bacterial reduction of crystalline Fe3+ oxides in single phase suspensions and subsurface materials. American Mineralogist 83, 1426-1443.
51. Zachara JM, Fredrickson JK, Smith SC, Gassman PL (2001) Solubilization of Fe(III) oxide-bound trace metals by a dissimilatory Fe(III) reducing bacterium. Geochimica et Cosmochimica Acta 65, 75-93.
52. Zachara JM, Kukkadapu RK, Fredrickson JK, Gorby YA, Smith SC (2002) Biomineralization of poorly crystalline Fe(III) oxides by dissimilatory metal reducing bacteria (DMRB). Geomicrobiology Journal 19, 179-207.