-
1
-
-
0033865962
-
Phylogenetic affiliation of the pseudomonads based on 16S rRNA sequence
-
Anzai, Y., Kim, H., Park, J.-Y., Wakabayashi, H. & Oyaizu, H. (2000). Phylogenetic affiliation of the pseudomonads based on 16S rRNA sequence. Int J Syst Evol Microbiol 50, 1563-1589.
-
(2000)
Int J Syst Evol Microbiol
, vol.50
, pp. 1563-1589
-
-
Anzai, Y.1
Kim, H.2
Park, J.-Y.3
Wakabayashi, H.4
Oyaizu, H.5
-
2
-
-
45549085507
-
Sphingomonas and related genera
-
In 3rd edn, release 3.14. Edited by M. Dworkin, S. Falkow, E. Rosenberg, K.-H. Schleifer & E. Stackebrandt. New York: Springer Inc
-
Balkwill, D. L., Fredrickson, J. K. & Romine, M. F. (2003). Sphingomonas and related genera. In The Prokaryotes. An Evolving Electronic Resource for the Microbiological Community, 3rd edn, release 3.14. Edited by M. Dworkin, S. Falkow, E. Rosenberg, K.-H. Schleifer & E. Stackebrandt. New York: Springer Inc.
-
(2003)
The Prokaryotes. An Evolving Electronic Resource for the Microbiological Community
-
-
Balkwill, D.L.1
Fredrickson, J.K.2
Romine, M.F.3
-
3
-
-
85013735162
-
Bacterial antagonists to Verticillium dahliae Kleb
-
Berg, G. & Balin, G. (1994). Bacterial antagonists to Verticillium dahliae Kleb. J Phytopathol 141, 99-110.
-
(1994)
J Phytopathol
, vol.141
, pp. 99-110
-
-
Berg, G.1
Balin, G.2
-
4
-
-
33845261493
-
A rapid method of total lipid extraction and purification
-
Bligh, E. G. & Dyer, W. J. (1959). A rapid method of total lipid extraction and purification. Can J Biochem Physiol 37, 911-917.
-
(1959)
Can J Biochem Physiol
, vol.37
, pp. 911-917
-
-
Bligh, E.G.1
Dyer, W.J.2
-
5
-
-
0141503150
-
Sphingomonas aurantiaca sp. nov., Sphingomonas aerolata sp. nov. and Sphingomonas faeni sp. nov., air- and dustborne and Antarctic, orange-pigmented, psychro-tolerant bacteria, and emended description of the genus Sphingomonas
-
Busse, H.-J., Denner, E. B. M., Buczolits, S., Salkinoja-Salonen, M., Bennasar, A. & Kämpfer, P. (2003). Sphingomonas aurantiaca sp. nov., Sphingomonas aerolata sp. nov. and Sphingomonas faeni sp. nov., air- and dustborne and Antarctic, orange-pigmented, psychro-tolerant bacteria, and emended description of the genus Sphingomonas. Int J Syst Evol Microbiol 53, 1253-1260.
-
(2003)
Int J Syst Evol Microbiol
, vol.53
, pp. 1253-1260
-
-
Busse, H.-J.1
Denner, E.B.M.2
Buczolits, S.3
Salkinoja-Salonen, M.4
Bennasar, A.5
Kämpfer, P.6
-
6
-
-
27844478181
-
Description of two novel species, Sphingomonas abaci sp. nov. and Sphingomonas panni sp. nov
-
Busse, H.-J., Hauser, E & Kämpfer, P. (2005). Description of two novel species, Sphingomonas abaci sp. nov. and Sphingomonas panni sp. nov. Int J Syst Evol Microbiol 55, 2565-2569.
-
(2005)
Int J Syst Evol Microbiol
, vol.55
, pp. 2565-2569
-
-
Busse, H.-J.1
Hauser, E.2
Kämpfer, P.3
-
7
-
-
0034980407
-
Sphingomonas pituitosa sp. nov., an exopolysaccharide-producing bacterium that secretes an unusual type of sphingan
-
Denner, E. B. M., Paukner, S., Kämpfer, P., Moore, E. R. B., Abraham, W.-R., Busse, H.-J., Wanner, G. & Lubitz, W. (2001). Sphingomonas pituitosa sp. nov., an exopolysaccharide-producing bacterium that secretes an unusual type of sphingan. Int J Syst Evol Microbiol 51, 827-841.
-
(2001)
Int J Syst Evol Microbiol
, vol.51
, pp. 827-841
-
-
Denner, E.B.M.1
Paukner, S.2
Kämpfer, P.3
Moore, E.R.B.4
Abraham, W.-R.5
Busse, H.-J.6
Wanner, G.7
Lubitz, W.8
-
8
-
-
0024358339
-
Fluorometric deoxyribonucleic acid- deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains
-
Ezaki, T., Hashimoto, Y. & Yabuuchi, E. (1989). Fluorometric deoxyribonucleic acid- deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39, 224-229.
-
(1989)
Int J Syst Bacteriol
, vol.39
, pp. 224-229
-
-
Ezaki, T.1
Hashimoto, Y.2
Yabuuchi, E.3
-
9
-
-
0000122573
-
PHYLIP - Phylogeny Inference Package (version 3.2)
-
Felsenstein, J. (1989). PHYLIP - Phylogeny inference package (version 3.2). Cladistics 5, 164-166.
-
(1989)
Cladistics
, vol.5
, pp. 164-166
-
-
Felsenstein, J.1
-
10
-
-
0000732090
-
Evolution of protein molecules
-
In Edited by H. N. Munro. New York: Academic Press
-
Jukes, T. H. & Cantor, C. R. (1969). Evolution of protein molecules. In Mammalian Protein Metabolism, pp. 21-132. Edited by H. N. Munro. New York: Academic Press.
-
(1969)
Mammalian Protein Metabolism
, pp. 21-132
-
-
Jukes, T.H.1
Cantor, C.R.2
-
11
-
-
0342940780
-
Classification of "Pseudomonas azotocolligans" Anderson 1955, 132, in the genus Sphingomonas as Sphingomonas trueperi sp. nov
-
Kämpfer, P., Denner, E. B. M., Meyer, S., Moore, E. R. B. & Busse, H.-J. (1997). Classification of "Pseudomonas azotocolligans" Anderson 1955, 132, in the genus Sphingomonas as Sphingomonas trueperi sp. nov. Int J Syst Bacteriol 47, 577-583.
-
(1997)
Int J Syst Bacteriol
, vol.47
, pp. 577-583
-
-
Kämpfer, P.1
Denner, E.B.M.2
Meyer, S.3
Moore, E.R.B.4
Busse, H.-J.5
-
12
-
-
0000978501
-
Determination of carbohydrate metabolism of marine bacteria
-
Leifson, E. (1963). Determination of carbohydrate metabolism of marine bacteria. J Bacteriol 85, 1183-1184.
-
(1963)
J Bacteriol
, vol.85
, pp. 1183-1184
-
-
Leifson, E.1
-
13
-
-
73649209034
-
Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature
-
Marmur, J. & Doty, P. (1962). Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J Mol Biol 5, 109-118.
-
(1962)
J Mol Biol
, vol.5
, pp. 109-118
-
-
Marmur, J.1
Doty, P.2
-
14
-
-
0014460729
-
Determination of DNA base compositions from melting profiles in dilute buffers
-
Owen, R. J., Hill, L. R. & Lapage, S. P. (1969). Determination of DNA base compositions from melting profiles in dilute buffers. Biopolymers 7, 503-516.
-
(1969)
Biopolymers
, vol.7
, pp. 503-516
-
-
Owen, R.J.1
Hill, L.R.2
Lapage, S.P.3
-
15
-
-
0023989064
-
Improved tools for biological sequence comparison
-
Pearson, W. R. & Lipman, D. J. (1988). Improved tools for biological sequence comparison. Proc Natl Acad Sci U S A 85, 2444-2448.
-
(1988)
Proc Natl Acad Sci U S A
, vol.85
, pp. 2444-2448
-
-
Pearson, W.R.1
Lipman, D.J.2
-
16
-
-
0037978079
-
Marinomonas primoryensis sp. nov., a novel psychrophile isolated from coastal sea-ice in the Sea of Japan
-
Romanenko, L. A., Uchino, M., Mikhailov, V. V., Zhukova, N. V. & Uchimura, T. (2003). Marinomonas primoryensis sp. nov., a novel psychrophile isolated from coastal sea-ice in the Sea of Japan. Int J Syst Evol Microbiol 53, 829-832.
-
(2003)
Int J Syst Evol Microbiol
, vol.53
, pp. 829-832
-
-
Romanenko, L.A.1
Uchino, M.2
Mikhailov, V.V.3
Zhukova, N.V.4
Uchimura, T.5
-
17
-
-
21244449971
-
Pseudomonas xanthomarina sp. nov., a novel bacterium isolated from marine ascidian
-
Romanenko, L. A., Uchino, M., Falsen, E., Lysenko, A. M., Zhukova, N. V. & Mikhailov, V. V. (2005). Pseudomonas xanthomarina sp. nov., a novel bacterium isolated from marine ascidian. J Gen Appl Microbiol 51, 65-71.
-
(2005)
J Gen Appl Microbiol
, vol.51
, pp. 65-71
-
-
Romanenko, L.A.1
Uchino, M.2
Falsen, E.3
Lysenko, A.M.4
Zhukova, N.V.5
Mikhailov, V.V.6
-
18
-
-
0033677866
-
Lipid composition and taxonomy of [Pseudomonas] echinoides: Transfer to the genus Sphingomonas
-
Rowe, N. J., Tunstall, J., Galbraith, L. & Wilkinson, S. G. (2000). Lipid composition and taxonomy of [Pseudomonas] echinoides: transfer to the genus Sphingomonas. Microbiology 146, 3007-3012.
-
(2000)
Microbiology
, vol.146
, pp. 3007-3012
-
-
Rowe, N.J.1
Tunstall, J.2
Galbraith, L.3
Wilkinson, S.G.4
-
19
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
20
-
-
0030999754
-
Transfer of Bacillus alginolyticus, Bacillus chondroitinus, Bacillus curdlanolyticus, Bacillus glucanolyticus, Bacillus kobensis, and Bacillus thiaminolyticus to the genus Paenibacillus and emended description of the genus Paenibacillus
-
Shida, O., Takagi, H., Kadowaki, K., Nakamura, L. K. & Komagata, K. (1997). Transfer of Bacillus alginolyticus, Bacillus chondroitinus, Bacillus curdlanolyticus, Bacillus glucanolyticus, Bacillus kobensis, and Bacillus thiaminolyticus to the genus Paenibacillus and emended description of the genus Paenibacillus. Int J Syst Bacteriol 47, 289-298.
-
(1997)
Int J Syst Bacteriol
, vol.47
, pp. 289-298
-
-
Shida, O.1
Takagi, H.2
Kadowaki, K.3
Nakamura, L.K.4
Komagata, K.5
-
21
-
-
0000612080
-
Phenotypic characterization
-
In Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology
-
Smibert, R. M. & Krieg, N. R. (1994). Phenotypic characterization. In Methods for General and Molecular Bacteriology, pp. 607-655. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
-
(1994)
Methods for General and Molecular Bacteriology
, pp. 607-655
-
-
Smibert, R.M.1
Krieg, N.R.2
-
22
-
-
0028028182
-
Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
-
Stackebrandt, E. & Goebel, B. M. (1994). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846-849.
-
(1994)
Int J Syst Bacteriol
, vol.44
, pp. 846-849
-
-
Stackebrandt, E.1
Goebel, B.M.2
-
23
-
-
33748991846
-
An e-Workbench for the study of microbial diversity: The system design and basic functions
-
Sugawara, H., Tanaka, N. & Miyazaki, S. (2003). An e-Workbench for the study of microbial diversity: the system design and basic functions. Microbiol Cult Coll 19, 59-67.
-
(2003)
Microbiol Cult Coll
, vol.19
, pp. 59-67
-
-
Sugawara, H.1
Tanaka, N.2
Miyazaki, S.3
-
24
-
-
0034919134
-
Proposal of the genus Sphingomonas sensu stricto and three new genera, Sphingobium, Novosphingobium and Sphingopyxis, on the basis of phylogenetic and chemotaxonomic analyses
-
Takeuchi, M., Hamana, K & Hiraishi, A. (2001). Proposal of the genus Sphingomonas sensu stricto and three new genera, Sphingobium, Novosphingobium and Sphingopyxis, on the basis of phylogenetic and chemotaxonomic analyses. Int J Syst Evol Microbiol 51, 1405-1417.
-
(2001)
Int J Syst Evol Microbiol
, vol.51
, pp. 1405-1417
-
-
Takeuchi, M.1
Hamana, K.2
Hiraishi, A.3
-
25
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
26
-
-
0000770675
-
Report of the ad hoc committee on reconciliation of approaches to bacterial systematics
-
& other authors International Committee on Systematic Bacteriology
-
Wayne, L. G., Brenner, D. J., Colwell, R. R., Grimont, P. A. D., Kandler, O., Krichevsky, M. I., Moore, L. H., Moore, W. E. C., Murray, R. G. E. & other authors (1987). International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacterial 37, 463-464.
-
(1987)
Int J Syst Bacterial
, vol.37
, pp. 463-464
-
-
Wayne, L.G.1
Brenner, D.J.2
Colwell, R.R.3
Grimont, P.A.D.4
Kandler, O.5
Krichevsky, M.I.6
Moore, L.H.7
Moore, W.E.C.8
Murray, R.G.E.9
-
27
-
-
33646200083
-
Sphingomonas azotifigens sp. nov., a nitrogen-fixing bacterium isolated from the roots of Oryza sativa
-
Xie, C.-H. & Yokota, A. (2006). Sphingomonas azotifigens sp. nov., a nitrogen-fixing bacterium isolated from the roots of Oryza sativa. Int J Syst Evol Microbial 56, 889-893.
-
(2006)
Int J Syst Evol Microbial
, vol.56
, pp. 889-893
-
-
Xie, C.-H.1
Yokota, A.2
-
28
-
-
0025219590
-
Proposals of Sphingomonas paucimobilis gen. nov. and comb. nov., Sphingomonas parapaucimobilis sp. nov., Sphingomonas yanoikuyae sp. nov., Sphingomonas adhaesiva sp. nov., Sphingomonas capsulata comb. nov., and two genospecies of the genus Sphingomonas
-
Yabuuchi, E., Yano, I., Oyaizu, H., Hashimoto, Y., Ezaki, T. & Yamamoto, H. (1990). Proposals of Sphingomonas paucimobilis gen. nov. and comb. nov., Sphingomonas parapaucimobilis sp. nov., Sphingomonas yanoikuyae sp. nov., Sphingomonas adhaesiva sp. nov., Sphingomonas capsulata comb. nov., and two genospecies of the genus Sphingomonas. Microbiol Immunol 34, 99-119.
-
(1990)
Microbiol Immunol
, vol.34
, pp. 99-119
-
-
Yabuuchi, E.1
Yano, I.2
Oyaizu, H.3
Hashimoto, Y.4
Ezaki, T.5
Yamamoto, H.6
-
29
-
-
0036737838
-
Emendation of the genus Sphingomonas Yabuuchi et al., 1990 and junior objective synonymy of the species of three genera, Sphingobium, Novosphingobium and Sphingopyxis, in conjunction with Blastomonas ursincola
-
Yabuuchi, E., Kosako, Y., Fujiwara, N., Naka, T., Matsunaga, I., Ogura, H. & Kobayashi, K. (2002). Emendation of the genus Sphingomonas Yabuuchi et al., 1990 and junior objective synonymy of the species of three genera, Sphingobium, Novosphingobium and Sphingopyxis, in conjunction with Blastomonas ursincola. Int J Syst Evol Microbiol 52, 1485-1496.
-
(2002)
Int J Syst Evol Microbiol
, vol.52
, pp. 1485-1496
-
-
Yabuuchi, E.1
Kosako, Y.2
Fujiwara, N.3
Naka, T.4
Matsunaga, I.5
Ogura, H.6
Kobayashi, K.7
-
30
-
-
0041529850
-
Argimicins B and C, new anti-cyanobacterial compounds produced by Sphingomonas sp. M-17
-
Yamaguchi, T., Kobayashi, Y., Adachi, K. & Imamura, N. (2003). Argimicins B and C, new anti-cyanobacterial compounds produced by Sphingomonas sp. M-17. J Antibiot 56, 655-657.
-
(2003)
J Antibiot
, vol.56
, pp. 655-657
-
-
Yamaguchi, T.1
Kobayashi, Y.2
Adachi, K.3
Imamura, N.4
-
31
-
-
33749009794
-
Sphingomonas dokdonensis sp. nov., isolated from soil
-
Yoon, J.-H., Lee, M.-H., Kang, S.-J., Lee, S.-Y. & Oh, T.-K. (2006). Sphingomonas dokdonensis sp. nov., isolated from soil. Int J Syst Evol Microbiol 56, 2165-2169.
-
(2006)
Int J Syst Evol Microbiol
, vol.56
, pp. 2165-2169
-
-
Yoon, J.-H.1
Lee, M.-H.2
Kang, S.-J.3
Lee, S.-Y.4
Oh, T.-K.5
|