GEVALT: An integrated software tool for genotype analysis

BMC Bioinformatics

Volumn 8, Issue , 2007, Pages

  Davidovich, Ofir ^a   Kimmel, Gad ^a   Shamir, Ron ^a  

^a TEL AVIV UNIVERSITY   (Israel)

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHMIC TOOLS; COMMON INTERFACES; GENOTYPE ANALYSIS; INTEGRATED SOFTWARE; INTERACTIVE INTERFACES; PERMUTATION TESTING; SELECTION ALGORITHM; STATE OF THE ART;

COMPUTER SOFTWARE; TOOLS; VISUALIZATION;

ALGORITHMS;

ACCESS TO INFORMATION; ACCURACY; ARTICLE; COMPUTER INTERFACE; COMPUTER PROGRAM; CONTROLLED STUDY; GENE LINKAGE DISEQUILIBRIUM; GENETIC ALGORITHM; GENETIC ANALYSIS; GENETIC ASSOCIATION; GENETIC VARIABILITY; GENOTYPE; HAPLOTYPE; MARKER GENE; MEDICAL RESEARCH; PEDIGREE ANALYSIS; PREDICTION; SINGLE NUCLEOTIDE POLYMORPHISM; ALGORITHM; CHROMOSOME MAP; EVOLUTION; GENETICS; NUCLEOTIDE SEQUENCE; PEDIGREE; PROCEDURES; SYSTEM ANALYSIS;

ALGORITHMS; BIOLOGICAL EVOLUTION; CHROMOSOME MAPPING; DNA MUTATIONAL ANALYSIS; GENOTYPE; PEDIGREE; POLYMORPHISM, SINGLE NUCLEOTIDE; SOFTWARE; SOFTWARE DESIGN; SYSTEMS INTEGRATION; USER-COMPUTER INTERFACE;

EID: 33847161616     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-8-36     Document Type: Article

References (9)

1. Kimmel G Shamir R GERBIL: Genotype Resolution and Block Identification Using Likelihood Proc Natl Acad Sci U S A 2005 102 158-162 544046 15615859
2. Kimmel G Shamir R Maximum likelihood resolution of multi-block genotypes Proceedings of the Eighth Annual International Conference on Research in Computational Molecular Biology (RECOMB 04) The Association for Computing Machinery 2004 2-9
3. Halperin E Kimmel G Shamir R Tag SNP Selection in Genotype Data for Maximizing SNP Prediction Accuracy Bioinformatics 2005 21 Suppl 1 i195-i203 15961458
4. Barrett JC Fry B Maller J Daly MJ Haploview: Analysis and visualization of LD and haplotype maps Bioinformatics 2005 21 2 263-265 15297300
5. International HapMap Project http://www.hapmap.org
6. Zhang J Rowe WL Struewing JP Buetow KH HapScope: A software system for automated and visual analysis of functionally annotated haplotypes Nucl Acids Res 2002 30 23 5213-5221 137968 12466546
7. Stephens M Smith NJ Donnelly P A new statistical method for haplotype reconstruction from population data Am J Hum Genet 2001 68 4 978-989 1275651 11254454
8. SNPHAP software http://www-gene.cimr.cam.ac.uk/clayton/software/
9. Kimmel G Shamir R A Fast Method for Computing High Significance Disease Association in Large Population-Based Studies Am J Hum Genet 2006 79 481-492 16909386