-
1
-
-
0033555859
-
Emergent properties of networks of biological signaling pathways
-
Bhalla, U. S. and Iyengar, R. (1999) Emergent properties of networks of biological signaling pathways, Science 283, 381-387.
-
(1999)
Science
, vol.283
, pp. 381-387
-
-
Bhalla, U.S.1
Iyengar, R.2
-
2
-
-
33847156429
-
-
Wiley
-
Burrage, K., Burrage, P. M., Hamilton, N. and Tian, T. (2005) Computer-intensive simulations for cellular models, to appear in Parallel Computing for Bioinformatics and Computational Biology, Wiley.
-
(2005)
Computer-intensive simulations for cellular models, to appear in Parallel Computing for Bioinformatics and Computational Biology
-
-
Burrage, K.1
Burrage, P.M.2
Hamilton, N.3
Tian, T.4
-
4
-
-
2442438819
-
A multiscaled approach for simulating chemical reaction systems
-
Burrage, K., Tian, T. and Burrage, P. M. (2004) A multiscaled approach for simulating chemical reaction systems, Prog. Biophys. Mol Bio. 85, 217-234.
-
(2004)
Prog. Biophys. Mol Bio
, vol.85
, pp. 217-234
-
-
Burrage, K.1
Tian, T.2
Burrage, P.M.3
-
5
-
-
18744405416
-
Time accelerated Monte Carlo simulations of biological networks using the binomial tau-leap method
-
Chatterje, A., Mayawala, K., Edwards, J. S. and Vlachos, D. G. (2005) Time accelerated Monte Carlo simulations of biological networks using the binomial tau-leap method, Bioinformatics 21, 2136-2137.
-
(2005)
Bioinformatics
, vol.21
, pp. 2136-2137
-
-
Chatterje, A.1
Mayawala, K.2
Edwards, J.S.3
Vlachos, D.G.4
-
6
-
-
4344689881
-
Random Number Generators for parallel computers
-
download from
-
Coddington P. D. (1996) Random Number Generators for parallel computers, NHSE Review, No.2, download from http://nhse.cs.rice.edu/NHSEreview/RNG/.
-
(1996)
NHSE Review
, Issue.2
-
-
Coddington, P.D.1
-
7
-
-
0037119587
-
Stochastic gene expression in a single cell
-
Elowitz, M. B., Levine, A. J., Siggia, E. D. and Swain, P. S. (2000) Stochastic gene expression in a single cell, Science 297, 1183-1186.
-
(2000)
Science
, vol.297
, pp. 1183-1186
-
-
Elowitz, M.B.1
Levine, A.J.2
Siggia, E.D.3
Swain, P.S.4
-
8
-
-
0035905782
-
Modelling cellular behaviour
-
Endy, D. and Brent, R. (2001) Modelling cellular behaviour, Nature 409, 391-395.
-
(2001)
Nature
, vol.409
, pp. 391-395
-
-
Endy, D.1
Brent, R.2
-
9
-
-
33645429016
-
Exact stochastic simulation of coupled chemical reactions
-
Gillespie, D. T. (1977) Exact stochastic simulation of coupled chemical reactions, J. Phys. Chem. 81, 2340-2361.
-
(1977)
J. Phys. Chem
, vol.81
, pp. 2340-2361
-
-
Gillespie, D.T.1
-
10
-
-
0035933994
-
Approximate accelerated stochastic simulation of chemical reaction systems
-
Gillespie, D. T. (2001) Approximate accelerated stochastic simulation of chemical reaction systems, J. Chem. Phys. 115, 1716-1733.
-
(2001)
J. Chem. Phys
, vol.115
, pp. 1716-1733
-
-
Gillespie, D.T.1
-
11
-
-
3042843443
-
Localization of receptor-mediated signal transduction pathways: The inside story
-
Haugh, J. M. (2002) Localization of receptor-mediated signal transduction pathways: the inside story, Molecular Interventions 2,292-307.
-
(2002)
Molecular Interventions
, vol.2
, pp. 292-307
-
-
Haugh, J.M.1
-
12
-
-
0037109565
-
Approximate simulation of coupled fast and slow reactions for stochastic chemical kinetics
-
Haseltine E. L. and Rawlings, J. B. (2002) Approximate simulation of coupled fast and slow reactions for stochastic chemical kinetics, J. Chem. Phys. 117, 6959-6969.
-
(2002)
J. Chem. Phys
, vol.117
, pp. 6959-6969
-
-
Haseltine, E.L.1
Rawlings, J.B.2
-
13
-
-
0036204115
-
STOCKS: Stochastic kinetic simulations of biochemical systems with Gillespie algorithm
-
Kierzek, A. M. (2002) STOCKS: stochastic kinetic simulations of biochemical systems with Gillespie algorithm, Bioinformatics 18, 470-481.
-
(2002)
Bioinformatics
, vol.18
, pp. 470-481
-
-
Kierzek, A.M.1
-
14
-
-
13844250537
-
The epidermal growth factor receptor as a target to colorectal cancer therapy
-
Lockhart, C. and Berlin, J. D. (2005) The epidermal growth factor receptor as a target to colorectal cancer therapy, Seminars in Oncology 32, 52-60.
-
(2005)
Seminars in Oncology
, vol.32
, pp. 52-60
-
-
Lockhart, C.1
Berlin, J.D.2
-
15
-
-
1542345686
-
Bridging the gap between stochastic and deterministic regimes in the kinetic simulations of the biochemical reaction networks
-
Puchalka J. and Kierzek, A.M. (2004) Bridging the gap between stochastic and deterministic regimes in the kinetic simulations of the biochemical reaction networks, Biophy. J. 86, 1357-1372.
-
(2004)
Biophy. J
, vol.86
, pp. 1357-1372
-
-
Puchalka, J.1
Kierzek, A.M.2
-
16
-
-
0036212767
-
Computational modeling of the dynamics of the MAP kinase cascade activated by surface and internalized EGF receptors
-
Schoeberl, B., Eichler-Jonsson, C., Gilles, E. D. and Muller, G. (2002) Computational modeling of the dynamics of the MAP kinase cascade activated by surface and internalized EGF receptors, Nature Biotechnology 20, 370-375.
-
(2002)
Nature Biotechnology
, vol.20
, pp. 370-375
-
-
Schoeberl, B.1
Eichler-Jonsson, C.2
Gilles, E.D.3
Muller, G.4
-
17
-
-
0037241015
-
Testing parallel random number generators
-
Srinivasan, A., Mascagni, M. and Ceperley, D. (2003) Testing parallel random number generators, Parallel Computing 29, 69-94.
-
(2003)
Parallel Computing
, vol.29
, pp. 69-94
-
-
Srinivasan, A.1
Mascagni, M.2
Ceperley, D.3
-
18
-
-
3142543968
-
Binomial leap methods for simulating stochastic chemical kinetics
-
Tian T. and Burrage, K. (2004) Binomial leap methods for simulating stochastic chemical kinetics, J. Chem. Phys. 121, 10356-10364.
-
(2004)
J. Chem. Phys
, vol.121
, pp. 10356-10364
-
-
Tian, T.1
Burrage, K.2
|