The Calyptogena magnifica chemoautotrophic symbiont genome

Science

Volumn 315, Issue 5814, 2007, Pages 998-1000

  Newton, I L G ^a   Woyke, T ^b   Auchtung, T A ^a   Dilly, G F ^a   Dutton, R J ^c   Fisher, M C ^a   Fontanez, K M ^a   Lau, E ^a   Stewart, F J ^a   Richardson, P M ^b   Barry, K W ^b   Saunders, E ^b   Detter, J C ^b   Wu, D ^d   Eisen, J A ^e   Cavanaugh, C M ^a  

^a HARVARD UNIVERSITY   (United States)

^b DOE JOINT GENOME INSTITUTE   (United States)

^c HARVARD MEDICAL SCHOOL   (United States)

^d J CRAIG VENTER INSTITUTE   (United States)

^e UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; VITAMIN;

BIVALVE; CHEMOAUTOTROPHY; ENDOSYMBIONT; GENETIC ANALYSIS; GENOME; HYDROTHERMAL VENT;

AMINO ACID SYNTHESIS; ARTICLE; BACTERIAL GENOME; BIOSYNTHESIS; BIVALVE; CALYPTOGENA MAGNIFICA; CANDIDATUS RUTHIA MAGNIFICA; CHEMOAUTOTROPH; ENDOSYMBIONT; EVOLUTION; GAMMAPROTEOBACTERIA; HYDROTHERMAL VENT SPECIES; NONHUMAN; PRIORITY JOURNAL; SEQUENCE ANALYSIS;

ANIMALS; BIVALVIA; CARBON; CHEMOAUTOTROPHIC GROWTH; GAMMAPROTEOBACTERIA; GENOME, BACTERIAL; MOLECULAR SEQUENCE DATA; PHOTOSYNTHESIS; SYMBIOSIS;

BIVALVIA; CALYPTOGENA MAGNIFICA; INVERTEBRATA; VESICOMYIDAE;

EID: 33847118118     PISSN: 00368075     EISSN: 10959203     Source Type: Journal    
DOI: 10.1126/science.1138438     Document Type: Article

References (17)

1. C. M. Cavanaugh, Z. P. McKiness, I. L. G. Newton, F. J. Stewart, in The Prokaryotes (Springer-Verlag, Berlin, 2004).
2. K. J. Boss, R. D. Turner, Malacologia 20, 161 (1980).
3. C. M. Cavanaugh, Nature 302, 58 (1983).
4. J. J. Robinson, thesis, Harvard University, Cambridge, MA (1997).
5. 1 Compounds, M. E. Lidstrom, F. R. Tabita, Eds. (Kluwer Academic, Dordrecht, Netherlands, 1996), pp. 285-292.
6. J. M. Shively, G. Van Keulen, W. G. Meijer, Annu. Rev. Microbiol. 52, 191 (1998).
7. C. Dahl et al., J. Bacteriol. 187, 1392 (2005).
8. F. Verte et al., Biochemistry 41, 2932 (2002).
9. C. R. Fisher et al., Deep-Sea Res. 35, 1811 (1988).
10. J. J. Childress, C. R. Fisher, J. A. Favuzzi, N. K. Sanders, Physiol. Zool. 64, 1444 (1991).
11. F. Zal et al., Cah. Biol. Mar. 41, 413 (2000).
12. H. Kumagai, T. Fujiwara, H. Matsubara, K. Saeki, Biochemistry 36, 5509 (1997).
13. K. S. Johnson, J. J. Childress, R. R. Hessler, C. M. Sakamoto-Arnold, C. L. Beehler, Deep-Sea Res. 35, 1723 (1988).
14. A. P. Wood, J. P. Aurikko, D. P. Kelly, FEMS Microbiol. Rev. 28, 335 (2004).
15. A. Fiala-Médioni, C. Métivier, A. Herry, M. Le Pennec, Mar. Biol. 92, 65 (1986).
16. J. J. Wernegreen, Nat. Rev. Genet. 3, 850 (2002).
17. This research was funded by grants from the U.S. Department of Energy/Joint Genome Institute (JGI) Microbial Genomes Program (to C.M.C. and J.A.E.), a Merck Genome-Related Research Award (to C.M.C.), and a Howard Hughes Medical Institute Predoctoral Fellowship (to I.L.G.N.). Sequencing was carried out at the JGI, and we thank D. Bruce and E. Rubin for project management, D. Fraenkel for review of metabolic pathways in Ruthia, and P. Girguis and K. Scott for their helpful comments on the manuscript. The Candidatus R. magnifica genome can be found in GenBank (CP000488).