-
1
-
-
0035845511
-
Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications
-
T. Sorlie, C.M. Perou, R. Tibshirani, T. Aas, S. Geisler, H. Johnsen et al., Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications, Proc. Natl. Acad. Sci. U. S. A. 2001, 98, 10869-10874.
-
(2001)
Proc. Natl. Acad. Sci. U. S. A.
, vol.98
, pp. 10869-10874
-
-
Sorlie, T.1
Perou, C.M.2
Tibshirani, R.3
Aas, T.4
Geisler, S.5
Johnsen, H.6
-
2
-
-
0037165140
-
Prediction of central nervous system embryonal tumor outcome based on gene expression
-
S.L. Pomeroy, P. Tamayo, M. Gaasenbeek, L.M. Sturla, M. Angelo, M. E. McLaughlin et al., Prediction of central nervous system embryonal tumor outcome based on gene expression, Nature 2002, 415, 436-442.
-
(2002)
Nature
, vol.415
, pp. 436-442
-
-
Pomeroy, S.L.1
Tamayo, P.2
Gaasenbeek, M.3
Sturla, L.M.4
Angelo, M.5
McLaughlin, M.E.6
-
3
-
-
84984934048
-
DNA microarrays in drug discovery and development
-
C. Debouck, P. N. Goodfellow, DNA microarrays in drug discovery and development, Nat. Genet. 1999, 21, 48-50.
-
(1999)
Nat. Genet.
, vol.21
, pp. 48-50
-
-
Debouck, C.1
Goodfellow, P.N.2
-
4
-
-
0035977158
-
Microarray analysis and organization of circadian gene expression in Drosophila
-
M. J. McDonald, M. Rosbash, Microarray analysis and organization of circadian gene expression in Drosophila, Cell 2001, 107, 567-578.
-
(2001)
Cell
, vol.107
, pp. 567-578
-
-
McDonald, M.J.1
Rosbash, M.2
-
5
-
-
0035912721
-
Exploring the DNA-binding specificities of zinc fingers with DNA microarrays
-
M. L. Bulyk, X. Huang, Y. Choo, G. M. Church, Exploring the DNA-binding specificities of zinc fingers with DNA microarrays, Proc. Natl. Acad. Sci. U. S. A. 2001, 98, 7158-7163.
-
(2001)
Proc. Natl. Acad. Sci. U. S. A.
, vol.98
, pp. 7158-7163
-
-
Bulyk, M.L.1
Huang, X.2
Choo, Y.3
Church, G.M.4
-
6
-
-
0032441150
-
Cluster analysis and display of genome-wide expression patterns
-
M. B. Eisen, P. T. Spellman, P. O. Brown, D. Botstein, Cluster analysis and display of genome-wide expression patterns, Proc. Natl. Acad. Sci. U. S. A. 1998, 95, 14863-14868.
-
(1998)
Proc. Natl. Acad. Sci. U. S. A.
, vol.95
, pp. 14863-14868
-
-
Eisen, M.B.1
Spellman, P.T.2
Brown, P.O.3
Botstein, D.4
-
7
-
-
0032823523
-
Genome-wide analysis of DNA copy-number changes using cDNA microarrays
-
J.R. Pollack, C.M. Perou, A.A. Alizadeh, M.B. Eisen, A. Pergamenschikov, C. F. William et al., Genome-wide analysis of DNA copy-number changes using cDNA microarrays, Nat. Genet. 1999, 23, 41-46.
-
(1999)
Nat. Genet.
, vol.23
, pp. 41-46
-
-
Pollack, J.R.1
Perou, C.M.2
Alizadeh, A.A.3
Eisen, M.B.4
Pergamenschikov, A.5
William, C.F.6
-
8
-
-
0032903908
-
The transcriptional program in the response of human fibroblasts to serum
-
V.R. Iyer, M. B. Eisen, D. T. Ross, G. Schuler, T. Moore, J. C. Lee et al., The transcriptional program in the response of human fibroblasts to serum, Science 1999, 283, 83-87.
-
(1999)
Science
, vol.283
, pp. 83-87
-
-
Iyer, V.R.1
Eisen, M.B.2
Ross, D.T.3
Schuler, G.4
Moore, T.5
Lee, J.C.6
-
9
-
-
0034785443
-
Identifying regulatory networks by combinatorial analysis of promoter elements
-
Y. Pilpel, P. Sudarsanam, G. M. Church, Identifying regulatory networks by combinatorial analysis of promoter elements, Nat. Genet. 2001, 29, 153-159.
-
(2001)
Nat. Genet.
, vol.29
, pp. 153-159
-
-
Pilpel, Y.1
Sudarsanam, P.2
Church, G.M.3
-
10
-
-
0034730124
-
Importance of replication in microarray gene expression studies: Statistical methods and evidence from repetitive cDNA hybridizations
-
M. L. Lee, F. C. Kuo, G. A. Whitmore, J. Sklar, Importance of replication in microarray gene expression studies: Statistical methods and evidence from repetitive cDNA hybridizations, Proc. Natl. Acad. Sci. U. S. A. 2000, 97, 9834-9839.
-
(2000)
Proc. Natl. Acad. Sci. U. S. A.
, vol.97
, pp. 9834-9839
-
-
Lee, M.L.1
Kuo, F.C.2
Whitmore, G.A.3
Sklar, J.4
-
11
-
-
0034886709
-
Cancer genomics: Promises and complexities
-
W. Zhang, P. M. Laborde, K. R. Coombes, D. A. Berry, S. R. Hamilton, Cancer genomics: promises and complexities, Clin. Cancer Res. 2001, 7, 2159-2167.
-
(2001)
Clin. Cancer Res.
, vol.7
, pp. 2159-2167
-
-
Zhang, W.1
Laborde, P.M.2
Coombes, K.R.3
Berry, D.A.4
Hamilton, S.R.5
-
12
-
-
0033818954
-
A concise guide to cDNA microarray analysis
-
P. Hegde, R. Qi, K. Abernathy, C. Gay, S. Dharap, R. Gaspard et al., A concise guide to cDNA microarray analysis, BioTechniques 2000, 29, 548-550.
-
(2000)
BioTechniques
, vol.29
, pp. 548-550
-
-
Hegde, P.1
Qi, R.2
Abernathy, K.3
Gay, C.4
Dharap, S.5
Gaspard, R.6
-
13
-
-
16644377523
-
Progress towards the use of DNA microarray technology for the study of wild Plasmodium strains
-
P. Refour, M. Gissot, A. Siau, D. Mazier, C. Vaquero, Progress towards the use of DNA microarray technology for the study of wild Plasmodium strains, Med. Trop. (Mars) 2004, 64 (4), 387-393.
-
(2004)
Med. Trop. (Mars)
, vol.64
, Issue.4
, pp. 387-393
-
-
Refour, P.1
Gissot, M.2
Siau, A.3
Mazier, D.4
Vaquero, C.5
-
14
-
-
0031030886
-
Energy-transfer fluorescent reagents for DNA analyses
-
A.N. Glazer, R.A. Mathies, Energy-transfer fluorescent reagents for DNA analyses, Curr. Opin. Biotechnol. 1997, 8, 94-102.
-
(1997)
Curr. Opin. Biotechnol.
, vol.8
, pp. 94-102
-
-
Glazer, A.N.1
Mathies, R.A.2
-
15
-
-
33847158180
-
Microarray detection
-
in (Ed: M. Schena), John Wiley & Sons, Inc., Hoboken (New Jersey), USA
-
M. Schena, Microarray detection, in Microarray Analysis (Ed: M. Schena), John Wiley & Sons, Inc., Hoboken (New Jersey), USA, 2003, 197-254.
-
(2003)
Microarray Analysis
, pp. 197-254
-
-
Schena, M.1
-
16
-
-
0036752147
-
Comparison of fluorescent tag DNA labeling methods used for expression analysis by DNA microarrays
-
C. Richter, S. Schwager, W. Hentze, M.W. Ansorge, M. Muckenthaler, Comparison of fluorescent tag DNA labeling methods used for expression analysis by DNA microarrays, BioTechniques 2002, 33, 620-630.
-
BioTechniques 2002
, vol.33
, pp. 620-630
-
-
Richter, C.1
Schwager, S.2
Hentze, W.3
Ansorge, M.W.4
Muckenthaler, M.5
-
17
-
-
0035168393
-
Applications of DNA microarrays in microbial systems
-
R. W. Ye, T. Wang, L. Bedzyk, K. M. Croker, Applications of DNA microarrays in microbial systems, J. Microbiol. Methods 2001, 47, 257-272.
-
(2001)
J. Microbiol. Methods
, vol.47
, pp. 257-272
-
-
Ye, R.W.1
Wang, T.2
Bedzyk, L.3
Croker, K.M.4
-
18
-
-
27344453197
-
RNA amplification for successful gene profiling analysis
-
DOI 10.1186/1479-5876-3-28
-
E. Wang, RNA amplification for successful gene profiling analysis, J. Transl. Med. 2005, 3, 28-38. DOI 10.1186/1479-5876-3-28.
-
(2005)
J. Transl. Med.
, vol.3
, pp. 28-38
-
-
Wang, E.1
-
19
-
-
0035875553
-
Issues in cDNA microarray: Quality filtering, channel normalization, models of variations and assessment of gene effects
-
G. C. Tseng, M. K. Oh, L. Rohlin, J. C. Liao, W. H. Wong, Issues in cDNA microarray: quality filtering, channel normalization, models of variations and assessment of gene effects, Nucleic Acids Res. 2001, 29, 2549-2557.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 2549-2557
-
-
Tseng, G.C.1
Oh, M.K.2
Rohlin, L.3
Liao, J.C.4
Wong, W.H.5
-
20
-
-
0034869983
-
Normalization for cDNA microarrays: Optical technologies and informatics
-
SPIE (The International Society for Optical Engineering)
-
Y. H. Yang, S. Dudoit, P. Luu, T. P. Speed, Normalization for cDNA microarrays: Optical technologies and informatics, SPIE (The International Society for Optical Engineering) 2001, 4266, 141-152.
-
(2001)
, vol.4266
, pp. 141-152
-
-
Yang, Y.H.1
Dudoit, S.2
Luu, P.3
Speed, T.P.4
-
21
-
-
1342286802
-
Gene-specific dye bias in microarray reference designs
-
A.A. Dombkowski, B. J. Thibodeau, S. L. Starcevic, R. F. Novak, Gene-specific dye bias in microarray reference designs, FEBS Lett. 2004, 560, 120-124.
-
(2004)
FEBS Lett.
, vol.560
, pp. 120-124
-
-
Dombkowski, A.A.1
Thibodeau, B.J.2
Starcevic, S.L.3
Novak, R.F.4
-
22
-
-
0025257556
-
Amplified RNA synthesized from limited quantities of heterogeneous cDNA
-
R. N. Van Gelder, M. E. von Zastrow, A. Yool, W. C. Dement, J. D. Barchas, J. H. Eberwine, Amplified RNA synthesized from limited quantities of heterogeneous cDNA, Proc. Natl. Acad. Sci. U. S. A. 1990, 87, 1663-1667.
-
(1990)
Proc. Natl. Acad. Sci. U. S. A.
, vol.87
, pp. 1663-1667
-
-
Van Gelder, R.N.1
von Zastrow, M.E.2
Yool, A.3
Dement, W.C.4
Barchas, J.D.5
Eberwine, J.H.6
-
23
-
-
0026588147
-
Analysis of gene expression in single live neurons
-
J. Eberwine, H. Yeh, K. Miyashiro, Y. Cao, S. Nair, R. Finnell et al., Analysis of gene expression in single live neurons, Proc. Natl. Acad. Sci. U. S. A. 1992, 89, 3010-3014.
-
(1992)
Proc. Natl. Acad. Sci. U. S. A.
, vol.89
, pp. 3010-3014
-
-
Eberwine, J.1
Yeh, H.2
Miyashiro, K.3
Cao, Y.4
Nair, S.5
Finnell, R.6
-
24
-
-
0036281003
-
RNA amplification results in reproducible microarray data with slight ratio bias
-
L. G. Puskas, A. Zvara, L. Jr. Hackler, T. Micsik, P. van Hummelen, RNA amplification results in reproducible microarray data with slight ratio bias, BioTechniques 2002, 33 (6), 1330-1340.
-
(2002)
BioTechniques
, vol.33
, Issue.6
, pp. 1330-1340
-
-
Puskas, L.G.1
Zvara, A.2
Hackler Jr., L.3
Micsik, T.4
van Hummelen, P.5
-
25
-
-
0035293021
-
Quantitative analysis of mRNA amplification by in vitro transcription
-
L. R. Baugh, A. A. Hill, E. L. Brown, C. P. Hunter, Quantitative analysis of mRNA amplification by in vitro transcription, Nucleic Adds Res. 2001, 29 (5), E29.
-
(2001)
Nucleic Adds Res.
, vol.29
, Issue.5
-
-
Baugh, L.R.1
Hill, A.A.2
Brown, E.L.3
Hunter, C.P.4
-
26
-
-
0035735265
-
Computational identification of promoters and first exons in the human genome
-
R. V. Davuluri, I. Grosse, M. Q. Zhang, Computational identification of promoters and first exons in the human genome, Nat. Genet. 2001, 29, 412-417.
-
(2001)
Nat. Genet.
, vol.29
, pp. 412-417
-
-
Davuluri, R.V.1
Grosse, I.2
Zhang, M.Q.3
-
27
-
-
0037699066
-
Genome-wide genetic characterization of bladder cancer: A comparison of high-density single-nucleotide polymorphism arrays and PCR-based microsatellite analysis
-
M. O. Hoque, C. C. Lee, P. Cairns, M. Schoenberg, D. Sidransky, Genome-wide genetic characterization of bladder cancer: A comparison of high-density single-nucleotide polymorphism arrays and PCR-based microsatellite analysis, Cancer Res. 2003, 63, 2216-2222.
-
(2003)
Cancer Res.
, vol.63
, pp. 2216-2222
-
-
Hoque, M.O.1
Lee, C.C.2
Cairns, P.3
Schoenberg, M.4
Sidransky, D.5
-
28
-
-
9144225008
-
Evaluation of sense-strand mRNA amplification by comparative quantitative PCR
-
A. G. Loyal, B. Jessica, S. Jaime, H. Kevin, C. G. Robert, P. H. Ronald, Evaluation of sense-strand mRNA amplification by comparative quantitative PCR, BMC Genomics 2004, 5, 76-84.
-
(2004)
BMC Genomics
, vol.5
, pp. 76-84
-
-
Loyal, A.G.1
Jessica, B.2
Jaime, S.3
Kevin, H.4
Robert, C.G.5
Ronald, P.H.6
-
29
-
-
0037314242
-
Probe generation directly from small numbers of cells for DNA microarray studies
-
C. C. Xiang, M. Chen, O. A. Kozhich, Q. N. Phan, J. M. Inman, Y. Chen et al., Probe generation directly from small numbers of cells for DNA microarray studies, BioTechniques 2003, 34 (2), 386-393.
-
(2003)
BioTechniques
, vol.34
, Issue.2
, pp. 386-393
-
-
Xiang, C.C.1
Chen, M.2
Kozhich, O.A.3
Phan, Q.N.4
Inman, J.M.5
Chen, Y.6
-
30
-
-
0034006464
-
High-fidelity mRNA amplification for gene profiling
-
E. Wang, L. D. Miller, G. A. Ohnmacht, E. T. Liu, F. M. Marincola, High-fidelity mRNA amplification for gene profiling, Nat. Biotechnol. 2000, 18, 457-459.
-
(2000)
Nat. Biotechnol.
, vol.18
, pp. 457-459
-
-
Wang, E.1
Miller, L.D.2
Ohnmacht, G.A.3
Liu, E.T.4
Marincola, F.M.5
-
31
-
-
0036808012
-
RNA amplification in brain tissues
-
S. D. Ginsberg, S. Che, RNA amplification in brain tissues, Neurochem. Res. 2002, 27, 981-992.
-
(2002)
Neurochem. Res.
, vol.27
, pp. 981-992
-
-
Ginsberg, S.D.1
Che, S.2
-
32
-
-
0037082153
-
An evaluation of tyramide signal amplification and archived fixed and frozen tissue in microarray gene expression analysis
-
S. L. Karsten, V. M. Van Deerlin, C. Sabatti, L. H. Gill, D. H. Geschwind, An evaluation of tyramide signal amplification and archived fixed and frozen tissue in microarray gene expression analysis, Nucleic Acids Res. 2002, 30 (2), E4.
-
(2002)
Nucleic Acids Res.
, vol.30
, Issue.2
-
-
Karsten, S.L.1
Van Deerlin, V.M.2
Sabatti, C.3
Gill, L.H.4
Geschwind, D.H.5
-
33
-
-
0036976368
-
Evaluation and optimization of procedures for target labeling and hybridization of cDNA microarrays
-
J. Yu, M. I. Othman, R. Farjo, S. Zareparsi, S. P. MacNee, S. Yoshida et al., Evaluation and optimization of procedures for target labeling and hybridization of cDNA microarrays, Mol. Vis. 2002, 8, 130-137.
-
(2002)
Mol. Vis.
, vol.8
, pp. 130-137
-
-
Yu, J.1
Othman, M.I.2
Farjo, R.3
Zareparsi, S.4
MacNee, S.P.5
Yoshida, S.6
-
34
-
-
0037015215
-
Comparison of different labeling methods for two-channel high-density microarray experiments
-
E. Manduchi, L.M. Scearce, J.E. Brestelli, G.R. Grant, K. H. Kaestner, C. J. Stoeckert Jr., Comparison of different labeling methods for two-channel high-density microarray experiments, Physiol. Genomics 2002, 10, 169-179.
-
(2002)
Physiol. Genomics
, vol.10
, pp. 169-179
-
-
Manduchi, E.1
Scearce, L.M.2
Brestelli, J.E.3
Grant, G.R.4
Kaestner, K.H.5
Stoeckert Jr., C.J.6
-
35
-
-
3543068702
-
Microarray platforms - Comparisons and contrasts
-
G. Hardiman, Microarray platforms - comparisons and contrasts, Pharmacogenomics J. 2004, 5, 487-502.
-
(2004)
Pharmacogenomics J.
, vol.5
, pp. 487-502
-
-
Hardiman, G.1
-
36
-
-
84984932880
-
Array of hope
-
E. S. Lander, Array of hope, Nat. Genet. 1999, 21, 3-4.
-
(1999)
Nat. Genet.
, vol.21
, pp. 3-4
-
-
Lander, E.S.1
-
37
-
-
84984932472
-
Exploring the new world of genome with DNA microarrays
-
P. O. Brown, D. Botstein, Exploring the new world of genome with DNA microarrays, Nat. Genet. 1999, 21, 33-37.
-
(1999)
Nat. Genet.
, vol.21
, pp. 33-37
-
-
Brown, P.O.1
Botstein, D.2
-
38
-
-
84984934346
-
Gene expression informatics - It's all in your mine
-
D. E. Bassett Jr, M. B. Eisen, M. S. Boguski, Gene expression informatics - it's all in your mine, Nat. Genet. 1999, 21, 51-55.
-
(1999)
Nat. Genet.
, vol.21
, pp. 51-55
-
-
Bassett Jr, D.E.1
Eisen, M.B.2
Boguski, M.S.3
-
39
-
-
4143064922
-
Current strategies for electrochemical detection of DNA with solid electrodes
-
P. de-los-Santos-Alvarez, M. J. Lobo-Castanon, A. J. Miranda-Ordieres, P. Tunon-Blanco, Current strategies for electrochemical detection of DNA with solid electrodes, Anal. Bioanal. Chem. 2004, 378, 104-118.
-
(2004)
Anal. Bioanal. Chem.
, vol.378
, pp. 104-118
-
-
de-los-Santos-Alvarez, P.1
Lobo-Castanon, M.J.2
Miranda-Ordieres, A.J.3
Tunon-Blanco, P.4
-
40
-
-
23944469406
-
DNA-arrays with electrical detection: A label-free low cost technology for routine use in life sciences and diagnostics
-
P. Liepold, H. Wieder, H. Hillebrandt, A. Friebel, G. Hartwich, DNA-arrays with electrical detection: A label-free low cost technology for routine use in life sciences and diagnostics, Bioelectrochemistry 2005, 67, 143-150.
-
(2005)
Bioelectrochemistry
, vol.67
, pp. 143-150
-
-
Liepold, P.1
Wieder, H.2
Hillebrandt, H.3
Friebel, A.4
Hartwich, G.5
|