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Volumn 2006, Issue , 2006, Pages

Parallel implementation and performance characterization of MUSCLE

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHMS; CALCULATIONS; COMPUTER NETWORKS; PARALLEL PROCESSING SYSTEMS;

EID: 33847103242     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/IPDPS.2006.1639616     Document Type: Conference Paper
Times cited : (10)

References (15)
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    • Notredame, D.H.C.1    Heringa, J.2
  • 3
    • 0000303438 scopus 로고
    • The multiple sequence alignment problem in biology
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    • H. Carillo and D. Lipman. The multiple sequence alignment problem in biology. SIAM Journal on Applied Mathematics, 48(5):1073-1082, Oct 1988.
    • (1988) SIAM Journal on Applied Mathematics , vol.48 , Issue.5 , pp. 1073-1082
    • Carillo, H.1    Lipman, D.2
  • 4
    • 14644430471 scopus 로고    scopus 로고
    • PROBCONS: Probabilistic consistency-based multiple sequence alignment
    • Feb
    • C. B. Do, M. S. Mahabhashyam, M. Brudno, and S. Batzoglou. PROBCONS: Probabilistic consistency-based multiple sequence alignment. Genome Research, 15:330-340, Feb. 2005.
    • (2005) Genome Research , vol.15 , pp. 330-340
    • Do, C.B.1    Mahabhashyam, M.S.2    Brudno, M.3    Batzoglou, S.4
  • 6
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • Mar
    • R. C. Edgar. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research, 32(5):1792-1797, Mar. 2004.
    • (2004) Nucleic Acids Research , vol.32 , Issue.5 , pp. 1792-1797
    • Edgar, R.C.1
  • 7
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • N. Saitou and M. Nei. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol., 4:406-425, 1987.
    • (1987) Mol. Biol. Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 9
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • J. D. Thompson, D. G. Higgins, and T. J. Gibson. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res., 22:4673-4680, 1994.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 10
    • 0028679709 scopus 로고
    • On the complexity of multiple sequence alignment
    • L. Wang and T. Jiang. On the complexity of multiple sequence alignment. Journal of Computational Biology, 1(4):337-348, 1994.
    • (1994) Journal of Computational Biology , vol.1 , Issue.4 , pp. 337-348
    • Wang, L.1    Jiang, T.2
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    • European bioinformatics institute
    • European bioinformatics institute. http://www.ebi.ac.uk/.


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.