Multitarget PCR for diagnosis of pertussis and its clinical implications

Journal of Clinical Microbiology

Volumn 45, Issue 2, 2007, Pages 506-511

  Qin, Xuan ^a,b   Galanakis, Emmanouil ^b   Martin, Emily T ^b   Englund, Janet A ^b  

^a SEATTLE CHILDREN S RESEARCH INSTITUTE   (United States)

^b UNIVERSITY OF WASHINGTON SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

PERTUSSIS TOXIN;

ADOLESCENT; ARTICLE; BACTERIUM IDENTIFICATION; BORDETELLA PARAPERTUSSIS; CHILD; GENE INSERTION SEQUENCE; HOSPITALIZATION; HUMAN; INFANT; MAJOR CLINICAL STUDY; NUCLEOTIDE SEQUENCE; PERTUSSIS; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PROMOTER REGION; REAL TIME POLYMERASE CHAIN REACTION; SENSITIVITY AND SPECIFICITY;

BASE SEQUENCE; BORDETELLA PERTUSSIS; CULTURE MEDIA; DNA TRANSPOSABLE ELEMENTS; HUMANS; PERTUSSIS TOXIN; POLYMERASE CHAIN REACTION; PORINS; REC A RECOMBINASES; WHOOPING COUGH;

BORDETELLA; BORDETELLA PARAPERTUSSIS;

EID: 33847026787     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/JCM.02042-06     Document Type: Article

References (40)

1. Allen, C. W., and H. E. Jeffery. Pertussis in the neonatal nursery. 2005. J. Paediatr. Child Health 41:140-142.
2. Bamberger, E., N. Lahat, V. Gershtein, R. Gershtein, D. Benilevi, S. Shapiro, I. Kassis, L. Rubin, and I. Srugo. 2005. Diagnosing pertussis: the role of polymerase chain reaction. Isr. Med. Assoc. J. 7:351-354.
3. Baughman, A. L., K. M. Bisgard, K. M. Edwards, D. Guris, M. D. Decker, K. Holland, B. D. Meade, and F. Lynn. 2004. Establishment of diagnostic cutoff points for levels of serum antibodies to pertussis toxin, filamentous hemagglutinin, and fimbriae in adolescents and adults in the United States. Clin. Diagn. Lab. Immunol. 11:1045-1053.
4. Byrne, S., and A. T. Slack. 2006. Analysis of Bordetella pertussis pertactin and pertussis toxin types from Queensland, Australia, 1999-2003. BMC Infect. Dis. 6:53.
5. Calugar, A., I. R. Ortega-Sanchez, T. Tiwari, L. Oakes, J. A. Jahre, and T. V. Murphy. 2006. Nosocomial pertussis: costs of an outbreak and benefits of vaccinating health care workers. Clin. Infect. Dis. 42:981-988.
6. CDC. 2000. Guidelines for the control of pertussis outbreaks. U.S. Department of Health and Human Services, CDC, Atlanta, GA. [Online.] http: //www.cdc.gov/nip/publications/pertussis/guide.htm.
7. Cherry, J. D. 2005. The epidemiology of pertussis: a comparison of the epidemiology of the disease pertussis with the epidemiology of Bordetella pertussis infection. Pediatrics 115:1422-1427.
8. Cloud, J. L., W. C. Hymas, A. Turlak, A. Croft, U. Reischl, J. A. Daly, and K. C. Carroll. 2003. Description of a multiplex Bordetella pertussis and Bordetella parapertussis LightCycler PCR assay with inhibition control. Diagn. Microbiol. Infect. Dis. 46:189-195.
9. Crowcroft, N. S., R. Booy, T. Harrison, L. Spicer, J. Britto, Q. Mok, P. Heath, I. Murdoch, M. Zambon, R. George, and E. Miller. 2003. Severe and unrecognized: pertussis in UK infants. Arch. Dis. Child. 88:802-806.
10. Deeks, S., G. De Serres, N. Boulianne, B. Duval, L. Rochette, P. Dery, and S. Halperin. 1999. Failure of physicians to consider the diagnosis of pertussis in children. Clin. Infect. Dis. 28:840-846.
11. Dragsted, D. M., B. Dohn, J. Madsen, and J. S. Jensen. 2004. Comparison of culture and PCR for detection of Bordetella pertussis and Bordetella parapertussis under routine laboratory conditions. J. Med. Microbiol. 53:749-754.
12. Edelman, K., S. Nikkari, O. Ruuskanen, Q. He, M. Viljanen, and J. Mertsola. 1996. Detection of Bordetella pertussis by polymerase chain reaction and culture in the nasopharynx of erythromycin-treated infants with pertussis. Pediatr. Infect. Dis. J. 15:54-57.
13. Edwards, K. M. 2005. Overview of pertussis: focus on epidemiology, sources of infection, and long-term protection after infant vaccination. Pediatr. Infect. Dis. J. 24:S104-S108.
14. Farrell, D. J., M. McKeon, G. Daggard, M. J. Loeffelholz, C. J. Thompson, and T. K. Mukkur. 2000. Rapid-cycle PCR method to detect Bordetella pertussis that fulfills all consensus recommendations for use of PCR in diagnosis of pertussis. J. Clin. Microbiol. 38:4499-4502.
15. Hallander, H. O. 1999. Microbiological and serological diagnosis of pertussis. Clin. Infect. Dis. 28:S99-S106.
16. Heininger, U., G. Schmidt-Schlapfer, J. D. Cherry, and K. Stehr. 2000. Clinical validation of a polymerase chain reaction assay for the diagnosis of pertussis by comparison with serology, culture, and symptoms during a large pertussis vaccine efficacy trial. Pediatrics 105:E31.
17. Herwegh, S., C. Carnoy, F. Wallet, C. Loiez, and R. J. Courcol. 2005. Development and use of an internal positive control for detection of Bordetella pertussis by PCR. J. Clin. Microbiol. 43:2462-2464.
18. Houard, S., C. Hackel, A. Herzog, and A. Bollen. 1989. Specific identification of Bordetella pertussis by the polymerase chain reaction. Res. Microbiol. 140:477-487.
19. Knorr, L., J. D. Fox, P. A. Tilley, and J. Ahmed-Bentley. 2006. Evaluation of real-time PCR for diagnosis of Bordetella pertussis infection. BMC Infect. Dis. 6:62.
20. Korgenski, E. K., and J. A. Daly. 1997. Surveillance and detection of erythromycin resistance in Bordetella pertussis isolates recovered from a pediatric population in the Intermountain West region of the United States. J. Clin. Microbiol. 35:2989-2991.
21. Kosters K., U. Reischl, J. Schmetz, M. Riffelmann, and C. H. Wirsing von Konig. 2002. Real-time LightCycler PCR for detection and discrimination of Bordetella pertussis and Bordetella parapertussis. J. Clin. Microbiol. 40:1719-1722.
22. Li, Z., D. L. Jansen, T. M. Finn, S. A. Halperin, A. Kasina, S. P. O'Connor, T. Aoyama, C. R. Manclark, and M. J. Brennan. 1994. Identification of Bordetella pertussis infection by shared-primer PCR. J. Clin. Microbiol. 32: 783-789.
23. Li, Z. M., J. H. Hannah, S. Stibitz, N. Y. Nguyen, C. R. Manclark, and M. J. Brennan. 1991. Cloning and sequencing of the structural gene for the porin protein of Bordetella pertussis. Mol. Microbiol. 5:1649-1656.
24. Lievano, F. A., M. A. Reynolds, A. L. Waring, J. Ackelsberg, K. M. Bisgard, G. N. Sanden, D. Guris, A. Golaz, D. J. Bopp, R. J. Limberger, and P. F. Smith. 2002. Issues associated with and recommendations for using PCR to detect outbreaks of pertussis. J. Clin. Microbiol. 40:2801-2805.
25. Marchant, C. D., A. M. Loughlin, S. M. Lett, C. W. Todd, L. H. Wetterlow, R. Bicchieri, S. Higham, P. Etkind, E. Silva, and G. R. Siber. 1994. Pertussis in Massachusetts, 1981-1991: incidence, serologic diagnosis, and vaccine effectiveness. J. Infect. Dis. 169:1297-1305.
26. Melton, A. R., and A. A. Weiss. 1989. Environmental regulation of expression of virulence determinants in Bordetella pertussis. J. Bacteriol. 171:6206-0212.
27. Mooi, F. R., H. Hallander, C. H. Wirsing von Konig, B. Hoet, and N. Guiso. 2000. Epidemiological typing of Bordetella pertussis isolates: recommendations for a standard methodology. Eur. J. Clin. Microbiol. Infect. Dis. 19: 174-181.
28. Muller F. M., J. E. Hoppe, and C. H. Wirsing von Konig. 1997. Laboratory diagnosis of pertussis: state of the art in 1997. J. Clin. Microbiol. 35:2435-2443.
29. Muyldermans, G., O. Soetens, M. Antoine, S. Bruisten, B. Vincart, F. Doucet-Populaire, N. K. Fry, P. Olcen, J. M. Scheftel, J. M. Senterre, A. van der Zee, M. Riffelmann, D. Pierard, and S. Lauwers. 2005. External quality assessment for molecular detection of Bordetella pertussis in European laboratories. J. Clin. Microbiol. 43:30-35.
30. Nygren, M., E. Reizenstein, M. Ronaghi, and J. Lundeberg. 2000. Polymorphism in the pertussis toxin promoter region affecting the DNA-based diagnosis of Bordetella infection. J. Clin. Microbiol. 38:55-60.
31. Parkhill, J., M. Sebaihia, A. Preston, L. D. Murphy, N. Thomson, Harris, D. E., et al. 2003. Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis, and Bordetella bronchiseptica. Nat. Genet. 35:32-40.
32. Qin, X., D. K. Turgeon, B. P. Ingersoll, P. W. Monsaas, C. J. Lemoine, T. Tsosie, L. O. Stapp, and P. M. Abe. 2002. Bordetella pertussis PCR: simultaneous targeting of signature sequences. Diagn. Microbiol. Infect. Dis. 43:269-275.
33. Reizenstein, E., B. Johansson, L. Mardin, J. Abens, R. Mollby, and H. O. Hallander. 1993. Diagnostic evaluation of polymerase chain reaction discriminative for Bordetella pertussis, B. parapertussis, and B. bronchiseptica. Diagn. Microbiol. Infect. Dis. 17:185-191.
34. Riffelmann M., C. H. Wirsing von Konig, V. Caro, N. Guiso, and the Pertussis PCR Consensus Group. 2005. Nucleic Acid amplification tests for diagnosis of Bordetella infections. J. Clin. Microbiol. 43:4925-4929.
35. Schlapfer, G., J. D. Cherry, U. Heininger, M. Uberall, S. Schmitt-Grohe, S. Laussucq, M. Just, and K. Stehr. 1995. Polymerase chain reaction identification of Bordetella pertussis infections in vaccinees and family members in a pertussis vaccine efficacy trial in Germany. Pediatr. Infect. Dis. J. 14:209-214.
36. Sloan, L. M., M. K. Hopkins, P. S. Mitchell, E. A. Vetter, J. E., Rosenblatt, W. S. Harmsen, F. R. Cockerill, and R. Patel. 2002. Multiplex LightCycler PCR assay for detection and differentiation of Bordetella pertussis and Bordetella parapertussis in nasopharyngeal specimens. J. Clin. Microbiol. 40:96-100.
37. Taranger, J., B. Trollfors, L. Lind, G. Zackrisson, and K. Beling-Holmquist. 1994. Environmental contamination leading to false-positive polymerase chain reaction for pertussis. Pediatr. Infect. Dis. J. 13:936-937.
38. Templeton, K. E., S. A. Scheltinga, A. van der Zee, B. M. Diederen, A. M. van Kruijssen, H. Goossens, E. Kuijper, and E. C. Claas. 2003. Evaluation of real-time PCR for detection of and discrimination between Bordetella pertussis, Bordetella parapertussis, and Bordetella holmesii for clinical diagnosis. J. Clin. Microbiol. 41:4121-4126.
39. Vielemeyer, O., J. Y. Crouch, S. C. Edberg, and J. G. Howe. 2004. Identification of Bordetella pertussis in a critically ill human immunodeficiency virus-infected patient by direct genotypical analysis of Gram stained material and discrimination from B. holmesii by using a unique recA gene restriction enzyme site. J. Clin. Microbiol. 42:847-849.
40. von Konig, C. H., S. Halperin, M. Riffelmann, and N. Guiso. 2002. Pertussis of adults and infants. Lancet Infect. Dis. 2:744-750.