Alternative base calling method for resequencing microarrays

Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings

Volumn 7 VOLS, Issue , 2005, Pages 2809-2812

  Xiaojun, Di ^a   Cawley, Simon ^a  

^a Thermo Fisher Scientific   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOMEDICAL ENGINEERING;

HETEROZYGOTES; OLIGONUCLEOTIDE ARRAYS; RESEQUENCING MICROARRAYS;

NUCLEIC ACIDS;

EID: 33846935022     PISSN: 05891019     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper

References (12)

1. Anne M. Glazier, Joseph H. Nadeau, and Timothy J. Aitman, "Finding genes that underlie complex traits," Science, vol.298, pp.2345-2349, 2002.}
2. R.J. Klein et al., "Complement factor H polymorphism in age-related macular degeneration," Science, doi 10.1126, March 10, 2005.
3. S.P. Fodor et al., "Multiplexed biochemical assays with biological chips," Nature, vol.364, no.6437, pp.555-556, 1993.
4. S.P. Fodor et al., "Light-directed, spatially addressable parallel chemical synthesis," Science, vol.251, no.4995, pp.767-773, 1991.
5. A.C. Pease et al., "Light-generated oligonucleotide arrays for rapid dna sequence analysis," PNAS, vol.91, pp.5022-5026, 1993.
6. G. Kennedy et al., "Large scale genotyping of complex DNA," Nature Biotechnology, vol.21, pp.1233-1237, 2003.
7. S. Dong, E. Wang, L. Hsie, Y. Cao, X. Chen, and T. Gingeras, "Flexible use of high-density oligonucleotide arrays for single-nucleotide polymorphism discovery and validation," Genome Research, vol.11, pp.1418-1424, 2001.
8. J. Fan et al., "Parallel genotyping of human snps using generic high-densityoligonucleotide tag arrays," Genome Research, vol.10, pp.853-860, 2000.
9. G. Wang et al., "Large-scale identification, mapping, and genotyping of single-nucleotide polymorphisms in the human genome," Science, vol.280, pp. 1077-1082, 1998.
10. J.A. Warrington et al., "New developments in high-throughput resequencing and variation detection using high density microarrays," Human Mutation, vol.19, pp.402-409, 2002.
11. A. Maitra et al., "The human MitoChip: a high-throughput sequencing microarray for Mitochondrial mutation detection," Genome Research, vol.14, pp.812-819, 2004.
12. D.J. Cutler et al., "High-throughput variation detection and genotyping using microarrays," Genome Research, vol..11, pp.1913-1925, 2001.