An approach in building a chemical compound search engine in oracle database

Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings

Volumn 7 VOLS, Issue , 2005, Pages 2839-2842

  Wang, H ^a   Volarath, P ^a   Harrison, R ^a  

^a GEORGIA STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHMS; CHEMICAL COMPOUNDS; CONSTRAINT THEORY; INFORMATION RETRIEVAL; QUERY LANGUAGES; SEARCH ENGINES;

CHEMICAL STRUCTURES; DRUG DESIGN; ORACLE DATABASE; SEARCH ALGORITHMS;

DATABASE SYSTEMS;

EID: 33846931399     PISSN: 05891019     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/iembs.2005.1617065     Document Type: Conference Paper

References (11)

1. NCI. National Cancer Institute. http://www.nci.nih.gov
2. P. Volarath, H. Wang, H. Fu, and R. Harrison "Knowledge-Based algorithms for chemical structure and property analysis," EMBS 26th IEEE EMBS Annual International Conference, San Francisco, CA 2004
3. J. Xu and A. Hagler, "Review: Chemoinformatics and drug discovery", Molecules, vol. 7, pp. 566-600, 2002
4. J. R. Ullmann, "An algorithm for subgraph isomorphism", Journal of the ACM, vol. 23, pp. 31-42, 1976
5. L.P. Cordella, P. Foggia, C. Sansone, M. Vento, Performance evaluation of the VF Graph Matching Algoritmh, Proc. of the 10th ICIAP, IEEE Computer Society Press, pp. 1172-1177, 1999.
6. R. Sayle, "Improved SMILES Substructure Searching", http://www.daylight.com/meetings/emug00/Savle/substruct.html
7. J. Price, "JDBC programming in Oracle 9i", Berkeley, CA. McGraw-Hill publisher, 2002
8. J.Gasteiger and T. Engel, "Chemoinformatics", Weinheim, WEILEY-VCH Publisher, 2003.
9. R.W. Harrison "Stiffness and Energy Conservation in Molecular Dynamics: an Improved Integrator" (1993) J. Comp. Chem. 14 1112-1122
10. R.W. Harrison, I.V. Kourinov, L. C. Andrews "The Fourier Green's Function and the Rapid Evaluation of Molecular Potentials" (1994) Protein Engineering 7(3) 359-369.
11. AMMP. Advanced Molecular Modeling Program. www.cs.gsu.edu/~cscrwh/ ammp/ammp.html