Phylogenetic analysis of foot-and-mouth disease virus type O re-emerging in free areas of South America

Virus Research

Volumn 124, Issue 1-2, 2007, Pages 22-28

  Malirat, Viviana ^a   de Barros, José Júnior França ^a   Bergmann, Ingrid Evelyn ^a   Campos, Renata de Mendonça ^a   Neitzert, Erika ^a   da Costa, Eliane Veiga ^b   da Silva, Edson Elias ^b   Falczuk, Abraham Jaime ^a,c   Pinheiro, Diana Sione Barbosa ^d   de Vergara, Natalia ^f   Cirvera, José Luis Quiroga ^e   Maradei, Eduardo ^c   Di Landro, Rosa ^g  

^a Pan American Foot and Mouth Disease Center   (Brazil)

^b INSTITUTO OSWALDO CRUZ   (Brazil)

^c Servicio Nacional de Sanidad y Calidad Agroalimentaria Argentina   (Argentina)

^d LANAGRO PE (MAPA/SDA/CGAL)   (Brazil)

^e Lab de Invest Y Diagnostico Vet   (Bolivia)

^f Servicio Nacional de Calidad y Salud Animal   (Paraguay)

^g Dirección de Laboratorios Veterinarios Miguel C Rubino DILAVE MGAP   (Uruguay)

Author keywords

Europe South America FMDV topotype; Foot and mouth disease virus; Molecular epidemiology; Sequence analysis

Indexed keywords

ANIMAL CELL; ARGENTINA; ARTICLE; BRAZIL; EPIDEMIC; EUROPE; FOOT AND MOUTH DISEASE; FOOT AND MOUTH DISEASE VIRUS; LIVESTOCK; MOLECULAR EPIDEMIOLOGY; MOLECULAR PHYLOGENY; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SOUTH AMERICA; VIRUS STRAIN;

ANIMALS; BASE SEQUENCE; CAPSID PROTEINS; EPIDEMIOLOGY, MOLECULAR; FOOT-AND-MOUTH DISEASE; FOOT-AND-MOUTH DISEASE VIRUS; GEOGRAPHY; MOLECULAR SEQUENCE DATA; PHYLOGENY; RNA, VIRAL; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID; SOUTH AMERICA;

FOOT-AND-MOUTH DISEASE VIRUS; FOOT-AND-MOUTH DISEASE VIRUS - TYPE O;

EID: 33846857521     PISSN: 01681702     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.virusres.2006.09.006     Document Type: Article

References (44)

1. Aktas S., and Samuel A.R. Identification of antigenic epitopes on the foot and mouth disease virus isolate O1/Manisa/Turkey/69 using monoclonal antibodies. Rev. Sci. Tech. Off. Int. Epiz. 19 3 (2000) 744-753
2. Ansell D.M., Samuel A.R., Carpenter W.C., and Knowles N.J. Genetic relationships between foot-and-mouth disease type Asia 1 viruses. Epidemiol. Infect. 112 (1994) 213-224
3. Araujo Jr. J.P., Montassier H.J., and Pinto A.A. Extensive antigenic and genetic variation among foot-and-mouth disease type A viruses isolated from the 1994 and 1995 foci in Sao Paulo. Brazil. Vet. Microbiol. 84 (2002) 15-27
4. Astudillo V., Rosenberg F.J., Zottele A., and Casas Olascoaga R. Considerações sobre a saúde animal na América Latina. Hora Veterinária 9 54 (1990) 37-43
5. Bachrach H.L. Foot-and-mouth disease. Annu. Rev. Microbiol. 22 (1968) 201-244
6. Bastos A.D.S., Haydon D.T., Forsberg R., Knowles N.J., Anderson E.C., Bengis R.G., Nel L.H., and Thomson G.R. Genetic heterogeneity of SAT-1 type foot-and-mouth disease viruses in southern Africa. Arch. Virol. 146 (2001) 1537-1551
7. Beck E., and Strohmaier K. Subtyping of European FMDV outbreak strains by nucleotide sequence determination. J. Virol. 61 (1987) 1621-1629
8. Bergmann I.E., Malirat V., and Pereira P.J.V. Molecular characterization of foot-and-mouth disease virus strains used for vaccine production in South America. Bol. Centr. Panam. Fiebre Aftosa 58 (1992) 119-127
9. Bergmann I.E., Malirat V., and Falczuk A.J. Evolving perception on the benefits of vaccination as foot-and-mouth disease control policy: contributions of South America. Expert Rev. Vacc. 4 (2005) 903-913
10. Bergmann I.E., Malirat V., Neitzert E., and Correa Melo E. Evaluation of diagnostic tools for epidemiological purposes-application to FMD. In: Makkar H.P.S., and Vilijoen G.J. (Eds). Applications of Gene-Based Technologies for Improving Animal Production and Health in Developing Countries (2005), Springer, Netherlands 335-340
11. Bittle J.L., Houghten R.A., Alexander H., Shinnick T.M., Sutcliffe J.G., Lerner R.A., Rowlands D.J., and Brown F. Protection against foot-and-mouth disease by immunization with a chemically synthesized peptide predicted from the viral nucleotide sequence. Nature 298 (1982) 30-33
12. Carrillo C., Dopazo J., Moya A., Gonzalez M., Martínez M.A., Saiz J.C., and Sobrino F. Comparison of vaccine strains and the virus causing the 1986 foot-and-mouth disease outbreak in Spain: epizootiological analysis. Virus Res. 15 (1990) 45-56
13. Cheung A., DeLamarter J., Weiss S., and Kupper H. Comparison of the major antigenic determinants of different serotypes of foot-and-mouth disease virus. J. Virol. 48 2 (1983) 451-459
14. Correa Melo E., Saraiva V., and Astudillo V. Review of the status of foot and mouth disease in countries of South America and approaches to control and eradication. Rev. Sci. Tech. Off. Int. Epiz. 21 3 (2002) 429-436
15. DiMarchi R., Brooke G., Gale C., Cracknell V., Doel T., and Mowat N. Protection of cattle against foot-and-mouth disease by a synthetic peptide. Science 232 (1986) 639-641
16. Domingo E., Mateu M.G., Martínez M.A., Dopazo J., Moya A., and Sobrino F. Genetic variability and antigenic diversity of foot-and-mouth disease virus. In: Kurstak E., Marusyk R.G., Murphy F.A., and Van Regenmortel M.H.V. (Eds). Applied Virology Research: Virus Variability, Epidemiology and Control Vol. 2 (1990), Plenun Press, New York 233-266
17. Esterhuysen J.J. The antigenic variation of foot-and-mouth disease viruses and its significance in the epidemiology of the disease in southern Africa (1994), University of Pretoria, South Africa
18. Forss S., Strebel K., Beck E., and Schaller H. Nucleotide sequence and genome organization of foot-and-mouth disease virus. Nucleic Acids Res. 12 16 (1984) 6587-6601
19. Hemadri D., Tosh C., Venkataramanan R., Sanyal A., Samuel A.R., Knowles N.J., and Kitching R.P. Genetic analysis of foot-and-mouth disease virus type O isolates responsible for field outbreaks in India between 1993 and 1999. Epidemiol. Infect. 125 (2000) 729-736
20. Holland J.J., Spindler K., Horodyski F., Grabau E., Nichol S., and VandePol S. Rapid evolution of RNA genomes. Science 215 (1982) 1577-1585
21. Holland J.J., De La Torre J.C., and Steinhauer D.A. RNA virus populations as quasispecies. Curr. Topics Microbiol. Immunol. 176 (1992) 1-20
22. Huang C.C., Jong M.H., and Lin S.Y. Characteristics of foot and mouth disease virus in Taiwan. J. Vet. Med. Sci. 62 7 (2000) 677-679
23. Huang C.C., Lin Y.L., Huang T.S., Tu W.J., Lee S.H., Jong M.H., and Lin S.Y. Molecular characterization of foot-and-mouth disease virus isolated from ruminants in Taiwan in 1999-2000. Vet. Microbiol. 81 (2001) 193-205
24. Knowles N.J., Samuel A.R., Davies P.R., Kitching R.P., and Donaldson A.I. Outbreak of foot-and-mouth disease virus serotype O in the UK caused by a pandemic strain. Vet. Rec. 148 9 (2001) 258-259
25. Knowles N.J., and Samuel A.R. Molecular epidemiology of foot-and-mouth disease virus. Virus Res. 91 1 (2003) 65-80 (Review)
26. Knowles N.J., Samuel A.R., Davies P.R., Midgley R.J., and Valarcher J.F. Pandemic strain of foot-and-mouth disease virus serotype O. Emerg. Infect Dis. 11 12 (2005) 1887-1893
27. König G., Blanco C., Knowles N.J., Palma E.L., Maradei E., and Piccone M.E. Phylogenetic analysis of foot-and-mouth disease viruses isolated in Argentina. Virus Genes. 23 (2001) 175-182
28. Kumar S., Tamura K., and Nei M. MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief. Bioinformat. 5 (2004) 150-163
29. Makoff A.J., Paynter C.A., Rowlands D.J., and Boothroyd J.C. Comparison of the amino acid sequence of the major immunogen from three serotypes of foot and mouth disease virus. Nucleic Acids Res. 10 24 (1982) 8285-8295
30. Malirat V., Bergmann I.E., Augé de Mello P., Tiraboschi B., Beck E., and Gomes I. Genetic variation of foot-and-mouth disease virus during persistent infection in cattle. Virus Res. 34 (1994) 31-48
31. Malirat, V., Bergmann, I.E., 2003. Fiebre Aftosa: Instrumentos Moleculares para Caracterización Viral. RT-PCR y secuenciamiento cíclico para estudios de epidemiología molecular del virus de la fiebre aftosa. Serie de Manuales Didácticos, 17. Pan-American Foot-and-Mouth Disease Center. Rio de Janeiro, Brazil.
32. Mateu M.G., Martinez M.A., Capucci L., Andreu D., Giralt E., Sobrino F., Brocchi E., and Domingo E. A single amino acid substitution affects multiple overlapping epitopes in the major antigenic site of foot-and-mouth disease virus of serotype C. J. Gen. Virol. 71 Pt 3 (1990) 629-637
33. Mateu M.G., Valero M.L., Andreu D., and Domingo E. Systematic replacement of amino acid residues within an Arg-Gly-Asp-containing loop of foot-and-mouth disease virus and effect on cell recognition. J. Biol. Chem. 271 22 (1996) 12814-12819
34. PANAFTOSA PAHO/WHO, 2006. Informe Anual Laboratorio, 2005. Pan-American Foot-and-Mouth Disease Center. Rio de Janeiro, Brazil.
35. Pereira H.G. Foot-and-mouth disease. In: Gibbs E.P.G. (Ed). Virus Diseases of Food Animals vol. 2 (1981), Academic Press Inc., New York 333-363
36. Perry B.D., Kalpravidh W., Coleman P.G., Horst H.S., McDermott J.J., Randolph T.F., and Gleeson L.J. The economic impact of foot and mouth disease and its control in South-East Asia: a preliminary assessment with special reference to Thailand. Rev. Sci. Tech. Off. Int. Epiz. 18 2 (1999) 478-497 Review
37. Piccone M.E., Kaplan G., Giavedoni L., Domingo E., and Palma E.L. VP1 of serotype C foot-and-mouth disease viruses: long-term conservation of sequences. J. Virol. 62 (1988) 1469-1473
38. Racaniello V.R. Picornaviridae: the viruses and their replication. In: Fields B.N., et al. (Ed). Virology (2001), Raven Lippincott Wilkins & Wilkins 685-722
39. Saiz J., Sobrino F., and Dopazo J. Molecular epidemiology of foot-and-mouth disease virus type O. J. Gen. Virol. 74 (1993) 2281-2285
40. Samuel, A.R., 1997. Genetic and antigenic studies on foot-and-mouth disease virus type O. University of Hertfordshire, Working, England.
41. Samuel A.R., Knowles N.J., Kitching R.P., and Hafez S.M. Molecular analysis of foot-and-mouth disease type O viruses isolated in Saudi Arabia between 1983 and 1995. Epidemiol. Infect. 119 3 (1997) 381-389
42. Samuel A.R., and Knowles N.J. Foot-and-mouth disease type O viruses exhibit genetically and geographically distinct evolutionary lineages (topotypes). J. Gen. Virol. 82 Pt. 3 (2001) 609-621
43. Tami C., Kaplan G., Piccone M.E., and Palma E.L. Nucleotide sequence of the P1 region of foot-and-mouth disease virus strain O1 Caseros. Virus Genes. 14 3 (1997) 255-259
44. Vosloo W., Knowles N.J., and Thomson G.R. Genetic relationships between southern African SAT-2 isolates of foot-and-mouth disease virus. Epidemiol. Infect. 109 (1992) 547-558