Learning in human neural networks on microelectrode arrays

BioSystems

Volumn 88, Issue 1-2, 2007, Pages 1-15

  Pizzi, R ^a   Cino, G ^a   Gelain, F ^b   Rossetti, D ^a   Vescovi, A ^b  

^a UNIVERSITY OF MILAN   (Italy)

^b Stem Cell Research Institute   (Italy)

Author keywords

Learning; Microelectrode arrays; Neural networks; Self organization; Stem cells

Indexed keywords

TUNGSTEN;

ARRAY; ARTIFICIAL NEURAL NETWORK; ELECTRODE; HUMAN ACTIVITY; LEARNING; NEUROLOGY; SELF ORGANIZATION; SIGNALING;

ARTICLE; ARTIFICIAL NEURAL NETWORK; CONTROLLED STUDY; EMBRYO; EMBRYONIC STEM CELL; HUMAN; HUMAN CELL; MICROELECTRODE; MULTICHANNEL RECORDER; NERVE CELL GROWTH; NERVE CELL NETWORK; NERVE CELL STIMULATION;

EID: 33846804091     PISSN: 03032647     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.biosystems.2006.03.012     Document Type: Article

References (96)

1. Adrian E.D. The electrical activity of the mammalian olfactory bulb. Electroencephalogr. Clin. Neurophysiol. 2 (1950) 377-388
2. Akin T., Najafi K., Smoke R.H., and Bradley R.M. A micromachined silicon electrode for nerve regeneration applications. IEEE Trans. Biomed. Eng. 41 (1994) 305-313
3. Bels B., and Fromherz P. Transistor array with an organotypic brain slice: field potential records and synaptic currents. Eur. J. Neurosci. 15 (2002) 999-1005
4. Bonifazi P., and Fromherz P. Silicon chip for electronic communication between nerve cells by non-invasive interfacing and analog-digital processing. Adv. Mater. 17 (2002)
5. Borkholder D.A., Bao J., Maluf N.I., Perl E.R., and Kovacs G.T. Microelectrode arrays for stimulation of neural slice preparations. J. Neurosci. Methods 7 (1997) 61-66
6. Bouyer J.J., Montaron M.F., Vahnee J.M., Albert M.P., and Rougeul A. Anatomical localization of cortical beta rhythms in cat. Neuroscience 22 (1987) 863-869
7. Bove M., Martinoia S., Grattarola M., and Ricci D. The neuron-transistor junction: linking equivalent electric circuit models to microscopic descriptions. Thin Solid Films 285 (1996) 772-775
8. Bragin A., Jand¢ G., Ndasdy Z., Hetke J., Wise K., and Buzs ki G. Gamma (40-100 Hz) oscillation in the hippocampus of the behaving rat. J. Neurosci. 15 (1995) 47-60
9. Braun D., and Fromherz P. Fast voltage transients in capacitive silicon-to-cell stimulation detected with a luminescent molecular electronic probe. Phys. Rev. Lett. 13 86 (2001) 2905-2908
10. Breckenridge L.J., Wilson R.J.A., Connolly P., Curtis A.S.G., Dow J.A.T., Blackshaw S.E., and Wilkinson C.D.W. Advantages of using microfabricated extracellular electrodes for in vitro neuronal recording. J. Neurosci. Res. 42 (1995) 266-276
11. Canepari M., Bove M., Mueda E., Cappello M., and Kawana A. Experimental analysis of neural dynamics in cultured cortical networks and transitions between different patterns of activity. Biol. Cybernet. 77 (1997) 153-162
12. Carmena J.M., Lebedev M.A., Crist R.E., O'Doherty J.E., Santucci D.M., Dimitrov D.F., Patil P.G., and Henriquez C.S. Learning to control a brain-machine interface for reaching and grasping by primates. M.A.L. PLoS 1 (2003) 193-208
13. Chen O., Sheu B., and Fang W. Image compression on VLSI neural-based vector quantizer. Inf. Process. Manage. 28 (1992) 6
14. Choi J., Bang S.H., and Sheu B.J. A Programmable analog VLSI neural network processor for communication receivers. IEEE Trans. Neural Network 4 (1993) 3
15. Chrobak J.J., and Buzsaki G. Gamma oscillations in the entorhinal cortex of the freely behaving rat. J. Neurosci. 18 (1998) 388-398
16. De Marse T.B., Wagenaar D.A., and Potter S.M. The Neurally-controlled Artificial Animal: A Neural Computer Interface Between Cultured Neural Networks and a Robotic Body (2002), SFN 2002, Orlando, Florida
17. Dickson C.T., Biella G., and de Curtis M. Evidence for spatial modules mediated by temporal synchronization of carbachol-induced gamma rhythm in medial entorhinal cortex. J. Neurosci. 20 (2000) 7846-7854
18. Durbin R., and Mitchinson G. A dimension reduction framework for understanding cortical maps. Nature 343 (1990) 644-647
19. Eckhorn R., Bauer R., Jordan W., Brosch M., Kruse W., Munk M., and Reitboeck H.J. Coherent oscillations: a mechanism of feature linking in the visual cortex? Multiple electrode and correlation analyses in the cat. Biol. Cybern. 60 (1998) 121-130
20. Eckhorn R., Reitboeck H.J., Arndt M., and Dicke P. Feature linking via synchronization among distributed assemblies: simulations of results from cat visual cortex. Neural Comput. 2 (1990) 293-307
21. Eeckman F.H., and Freeman W.J. Correlations between unit firing and EEG in the rat olfactory system. Brain Res. 528 (1990) 238-244
22. Egert U., Schlosshauer B., Fennrich S., Nisch W., Fejtl M., Knott T., Müller T., and Hammerle H. A novel organotypic long-term culture of the rat hippocampus on substrate-integrated microelectrode arrays. Brain Resour. Protoc. 2 (1988) 229-242
23. Engel A.K., König P., and Singer W. Direct physiological evidence for scene segmentation by temporal coding. Proc. Natl. Acad. Sci. USA 88 (1991) 9136-9140
24. Engel A.K., König P., Kreiter A.K., and Singer W. Interhemispheric synchronization of oscillatory neuronal responses in cat visual cortex. Science 252 (1991) 1177-1179
25. Ermentrout B. Complex dynamics in WTA neural networks with slow inhibition. Neural Networks 5 (1992) 415-431
26. Favalli L., Mecocci A., and Pizzi R. A soft receiver using recurrent networks. Proc. EUSIPCO96, VII European Signal Processing Conference. Trieste (1996)
27. Freeman W.J. Role of chaotic dynamics in neural plasticity. In: Van Pelt J., and Lopes da Silva F.H. (Eds). The Self-organizing Brain: from Growth Cones to Functional Networks (1994), Elsevier
28. Freeman W.J., and van Dijk B.W. Spatial patterns of visual cortical fast EEG during conditioned reflex in a rhesus monkey. Brain Res. 422 (1987) 267-276
29. Freeman W.J. Relation of olfactory EEG on behaviour: time series analysis. Behav. Neurosci. 100 (1987)
30. Fromherz P. Electrical interfacing of nerve cells and semiconductor chips. Chem. Phys. Chem. 3 (2002) 276-284
31. Fromherz P., Muller C.O., and Weis R. Neuron-transistor: electrical transfer function measured by the Patch-Clamp technique. Phys. Rev. Lett. 71 (1993) 4079-4082
32. Fromherz P., and Schaden H. Defined neuronal arborisations by guided outgrowth of leech neurons in culture. Eur. J. Neurosci. 6 (1994)
33. Fromherz P., Offenhäusser A., Vetter T., and Weis J. A neuron-silicon-junction: a Retzius-cell of the leech on an insulated-gate field-effect transistor. Science 252 (1991) 1290-1293
34. Galambos R., Makeig S., and Talmachoff P.J. A 40-Hz auditory potential recorded from the human scalp. Proc. Natl. Acad. Sci. USA 78 (1981) 2643-2647
35. Garcia P.S., Calabrese R.L., DeWeerth S.P., and Ditto W. Simple arithmetic with firing rate encoding in leech neurons: simulation and experiment. Proceedings of the XXVI Australian Computer Science Conference, vol. 16. Adelaide (2003) 55-60
36. Gray C.M., König P., Engel A.K., and Singer W. Oscillatory responses in cat visual cortex exhibit inter-columnar synchronization which reflects global stimulus properties. Nature 338 (1989) 334-337
37. Gritti A., Rosati B., Lecchi M., Vescovi A.L., and Wanke E. Excitable properties in astrocytes derived from human embryonic CNS stem cells. Eur. J. Neurosci. 12 (2000) 3549-3559
38. Gritti A., Galli R., and Vescovi A.L. In: Federoff (Ed). Culture of Stem Cell of Central Nervous System (2001), Humana Press III 173-197
39. Haken H. Synergetic Computers and Cognition (A Top-down Approach to Neural Nets) (1991), Springer-Verlag
40. Haykin S. Neural Networks (A Comprehensive Foundation) (1994), MacMillan Coll. Pub.
41. Hopfield J.J. Neural networks and physical systems with emergent collective computational abilities. Proc. Natl. Acad. Sci. USA (1984) 81
42. Hubel D.H., and Wiesel T.N. Receptive fields, binocular interaction and functional architecture in the cat's visual cortex. J. Physiol. London 160 (1962) 106-154
43. Hubel D.H., and Wiesel T.N. Receptive fields and functional architecture of monkey striate cortex. J. Physiol. 195 (1968) 215-243
44. Hubel D.H., and Wiesel T.N. Sequence regularity and geometry of orientation columns in the monkey striate cortex. J. Comp. Neurol. 158 (1974) 267-293
45. Jeffries C. Code Recognition and Set Selection with Neural Networks (1991), Birkhauser Boston
46. Jenkner M., and Fromherz P. Bistability of membrane conductance in cell adhesion observed in a neuron transistor. Phys. Rev. Lett. 79 (1997) 4705-4708
47. Jenkner M., Muller B., and Fromherz P. Interfacing a silicon chip to pairs of snail neurons connected by electrical synapses. Biol. Cybernet. 84 (2001) 239-249
48. Jimbo Y., and Robinson H.P.C. Propagation of spontaneous synchronized activity in cortical slice cultures recorded by planar electrode arrays. Bioelectrochemistry 5 (2000) 107-115
49. Joliot M., Ribary U., and Llinas R. Human oscillatory brain activity near 40 Hz coexists with cognitive temporal binding. Proc. Natl. Acad. Sci USA 91 (1994) 11748-11751
50. Knudsen E., du Lac S., and Esterly S.D. Computational maps in the brain. Ann. Rev. Neurosci. (1987) 10-41
51. Kohonen T. Self-Organisation and Association Memory (1990), Springer-Verlag
52. Kononov, E., 1996. http://home.netcom.com/∼eugenek/download.html.
53. Kulli J., and Koch C. Does anesthesia cause loss of consciousness. Trends Neurosci. 14 (1991) 6-10
54. Lindner J.F., and Ditto W. Exploring the nonlinear dynamics of a physiologically viable model neuron. AIP Conf. Proc. 1 (1996) 375-385
55. Llinas R., and Ribary U. Coherent 40-Hz oscillation characterizes dream state in humans. Proc. Natl. Acad. Sci. USA 90 (1993) 2078-2081
56. Madler C., Keller I., Schwender D., and Poppel E. Sensory information processing during general anaesthesia: effect of isoflurane on auditory evoked neuronal oscillations. Br. J. Anaesth. 66 (1991) 81-87
57. Magistretti J., Mantegazza M., Guatteo E., and Wanke E. Action potential recorded with patch clamp amplifiers: are they genuine?. Trends Neurosci. 19 (1996) 531-534
58. Maher M.P., Pine J., Wright J., and Tai Y.C. The neurochip: a new multielectrode device for stimulating and recording from cultured neurons. Neurosci. Methods 87 (1999) 45-56
59. Mc Culloch W., and Pitt W. A logical calculus of the ideas immanent in nervous activity. Bull. Math. Biophys. 5 (1943) 115-133
60. McKay R.D.G. Stem cells in the central nervous system. Science 276 (1997) 66-71
61. Menon V., and Freeman W.J. Spatio-temporal correlations in human gamma band electrocorticograms. Electroencephalogr. Clin. Neurophys. 98 (1996) 89-102
62. Mitner W.H.R., Braun C., Arnold M., Witte H., and Taub E. Coherence of gamma-band EEG activity as a basis for associative learning. Nature 397 (1999) 434-436
63. Mountcastle V.B. Modality and topographic properties of single neurons of cat's somatic sensory cortex. J. Neurophysiol. 20 (1957) 408-434
64. Murthy V.N., and Fetz E.E. Coherent 25-35-Hz oscillations in the sensorimotor cortex of awake behaving monkeys. Proc. Natl. Acad. Sci. USA 89 (1992) 5670-5674
65. Pantev C., Makeig S., Hoke M., Galambos R., Hampson S., and Gallen C. Human auditory evoked gamma-band magnetic fields. Proc. Natl. Acad. Sci. USA 88 (1991) 8996-9000
66. Pfurtscheller G., Flotzinger D., and Neuper C. Differentiation between finger, toe and tongue movement in man based on 40 Hz EEG. Electroencephalogr. Clin. Neurophysiol. 90 (1994) 456-460
67. Pineda F.J. Dynamics and architectures for neural computation. J. Complex. 4 (1988) 216-245
68. Pizzi, R., 1997. Theory of Dynamical Neural Systems with application to Telecommunications, PhD Dissertation, University of Pavia.
69. Pizzi R., de Curtis M., and Dickson C. Evidence of chaotic attractors in cortical fast oscillations tested by an artificial neural network. In: Kacprzyk J. (Ed). Advances in Soft Computing (2002), Physica Verlag
70. Pizzi R., Reni G., Sicurello F., and Varini G. Comparison between clustering algorithms and neural networks for the classification of neurological diseases. Proc. Softstat 97. Heidelberg (1997)
71. Pizzi R., Sicurello F., and Varini G. Development of an inductive self-organizing network for the real-time segmentation of diagnostic images. Proceeding of the Third International Conference of Neural Networks and Expert Systems in Medicine and Healthcare. Pisa (1998) 44-50
72. Potter S.M. Distributed processing in cultured neuronal networks. In: Nicolelis (Ed). Progress in Brain Research, M.A.L. (2001), Elsevier Science B.V
73. Reger B., Fleming K.M., Sanguineti V., Simon Alford S., and Mussa-Ivaldi F.A. Connecting brains to robots: an artificial body for studying the computational properties of neural tissues. Artif. Life 6 (2000) 307-324
74. Ritter H., and Schulten K. On the stationary state of Kohonen's self-organizing sensory mapping. Biol. Cybernet. 54 (1986) 99-106
75. Ritter H., and Schulten K. Convergence properties of Kohonen's topology conserving maps: fluctuations, stability, and dimension selection. Biol. Cybernet. 60 (1988) 59-71
76. Rosen R. Dynamical System Theory in Biology. Stability Theory and its applications vol. 1 (1970), Wiley Interscience
77. Rosenblatt F. The perceptron: a probabilistic model for information storage and organization in the brain. Psychol. Rev. 65 (1958) 386-408
78. Rumelhart D.E., and Mcclelland J.L. Parallel Distributed Processing (1986), MIT Press, Cambridge
79. Saarinen J., and Kohonen T. Self-organized formation of colour maps in a model cortex. Perception 14 (1985) 711-719
80. Sanes J.N., and Donoghue J.P. Oscillations in local field potentials of the primate motor cortex during voluntary movement. Proc. Natl. Acad. Sci. USA 90 (1993) 4470-4474
81. Schatzthauer R., and Fromherz P. Neuron-silicon junction with voltage gated ionic currents. Eur. J. Neurosci. 10 (1998) 1956-1962
82. Schiff S.J., Jerger K., Duong D.H., Chang T., Spano M.L., and Ditto W. Controlling chaos in the brain. Nature 8 (1994) 25
83. School M., Sprössler C., Denyer M., Krause M., Nakajima K., Maelicke A., Knoll W., and Offenhäusser. Ordered networks of rat hippocampal neurons attached to silicon oxide surfaces. Neurosci. Methods 104 (2000) 65-75
84. Singer W., and Gray C.M. Visual feature integration and the temporal correlation hypothesis. Ann. Rev. Neurosci. 18 (1995) 555-586
85. Song H., Stevens C.F., and Gage F.H. Neural stem cells from adult hippocampus develop essential properties of functional CNS neurons. Nature Neurosci. 5 (2002) 5
86. Stumpf C. The fast component in the electrical activity of rabbit's hippocampus. Electroencephalogr. Clin. Neurophysiol. 18 (1965) 477-486
87. Takens F. Detecting strange actractors in turbulence. In: Rand D.A., and Young L.S. (Eds). Dynamical Systems and Turbulence-Lecture Notes in Mathematics vol. 898 (1981), Springer-Verlag
88. Tank D.W., and Hopfield J.J. Neural Architecture and Biophysics for Sequence Recognition in Neural Models of Plasticity (1989), Academic Press
89. Tiitinen H., Sinkkonen J., Reinikainen K., Alho K., Lavikainen J., and Naatanen R. Selective attention enhances the auditory 40-Hz transient response in humans. Nature 364 (1993) 59-60
90. Varela F.J. Resonant cell assemblies: a new approach to cognitive function and neuronal synchrony. Biol. Res. 28 (1995) 81-95
91. Vescovi A.L., Parati E.A., Gritti A., Poulin P., Ferrario M., Wanke E., Frölichsthal-Schoeller P., Cova L., Arcellana-Panlilio M., Colombo A., and Galli R. Isolation and cloning of multipotential stem cells from the embryonic human CNS and establishment of transplantable human neural stem cell lines by epigenetic stimulation. Exp. Neurol. 156 (1999) 71-83
92. Weis R., Müller B., and Fromherz P. Neuron adhesion on silicon chip probed by an array of field-effect transistors. Phys. Rev. Lett. 76 (1996) 327-330
93. Wilson R.J., Breckenridge L., Blackshaw S.E., Connolly P., Dow J.A.T., Curtis A.S.G., and Wilkinson C.D.W. Simultaneous multisite recordings and stimulation of single isolated leech neurons using planar extracellular electrode arrays. Neurosci. Methods 53 (1994) 101-110
94. Zbilut J.P., Thomasson N., and Webber Jr. C.L. Recurrence quantification analysis as a tool for nonlinear exploration of nonstationary cardiac signals. Med. Eng. Phys. 24 (2002) 53-60
95. Zbilut J.P., and Webber C.L. Embeddings and delays as derived from quantification of recurrent plots. Phys. Lett. (1992) 171
96. Zeck G., and Fromherz P. Noninvasive neuroelectronic interfacing with synaptically connected snail neurons on a semiconductor chip. Proc. Natl. Acad. Sci. 98 (2001) 10457-10462