Genetic diversity in common carp stocks assayed by random-amplified polymorphic DNA markers

Aquaculture Research

Volumn 38, Issue 2, 2007, Pages 147-155

  Basavaraju, Yaraguntappa ^a   Theertha Prasad, Doddanajappa ^b   Rani, Kumuda ^a   Pradeep Kumar, Shankarnyarayana ^a   Dhakya Naika, Umesha ^a   Jahageerdar, Shrinivas ^e   Srivastava, Prem Prakash ^e   Penman, David J ^c   Mair, Graham C ^d  

^a Karnataka Veterinary Animal and Fisheries Sciences University   (India)

^b UNIVERSITY OF AGRICULTURAL SCIENCES   (India)

^c UNIVERSITY OF STIRLING   (United Kingdom)

^d FLINDERS UNIVERSITY   (Australia)

^e CENTRAL INSTITUTE OF FISHERIES EDUCATION   (India)

Author keywords

Cyprinus carpio; Genotyping; Polymorphism; Random amplified polymorphic DNA (RAPD)

Indexed keywords

CYPRINID; DNA; FISH CULTURE; FISHERY PRODUCTION; GENETIC MARKER; GENETIC STRUCTURE; GENOTYPE; HOMOLOGY; INLAND FISHERY; POLYMORPHISM; REGRESSION ANALYSIS; STOCK ASSESSMENT;

ASIA; CENTRAL EUROPE; EURASIA; EUROPE; HUNGARY; INDIA; INDONESIA; KARNATAKA; SOUTH ASIA; SOUTHEAST ASIA; VIET NAM;

CYPRINIDAE; CYPRINUS CARPIO;

EID: 33846796423     PISSN: 1355557X     EISSN: 13652109     Source Type: Journal    
DOI: 10.1111/j.1365-2109.2006.01639.x     Document Type: Article

References (29)

1. Allendorf F.W. & Phelps S.R. (1980) Loss of genetic variation in a hatchery stock of cutthroat trout. Transactions of the American Fisheries Society 109, 537-543.
2. Balon E.K. (1995) Origin and domestication of wild carp Cyprinus carpio: from Roman gourmets to the swimming flowers. In: The Carp. Proceedings of Second Aquaculture Sponsored Symposium (ed. by R. Billard & G.A.E. Gall), 6-9 September, 1993, Budapest, Hungary. Aquaculture 129, 3-48..
3. Bardakci F. & Skibinski D.O.F. (1994) Application of the RAPD technique in tilapia fish: species and subspecies identification. Heredity 73, 117-123.
4. Basavaraju Y., Mair G.C. & Penman D.J. (2000) Proceedings of the Second Workshop on Genetic Improvement of Carps, 14-16 February 2000, UAS Bangalore, P.79.
5. Basavaraju Y., Mair G.C., Pradeep Kumar S., Mohan Kumar H.M., Theertha Prasad D., Kumada rani, Jahageerdar S. & Penman D.J. (2003) Assessment of common carp stocks for a breeding programme in Karnataka, India. International Symposium on Genetics in Aquaculture VIII, 9-15 November 2003, Puertovaras, Chile (Book of abstract) P.72.
6. Davis & Denise S.K. (1998) The impact of genetic markers on selection. Journal of Animal Science 76, 2331-2339.
7. Desvignes J.F., Laroche J., Durand J.D. & Bouvet Y. (2001) Genetic variability in reared stocks of common carp (Cyprinus carpio L.) based on allozymes and microsatellites. Aquaculture 194, 291-301.
8. Dong Z. & Zhou E. (1998) Application of the random amplified polymorphic DNA technique in a studyof heterosis in common carp, Cyprinus carpio L. Aquaculture Research 29, 595-600.
9. Gall G.A.E. (1987) Inbreeding. In: Population Genetics and Fishery Management (ed. by N. Ryman & F. Utter), pp. 47-88. University of Washington Press, London, UK.
10. Guyomard R. (1993) Methods to describe fish stocks. In: Genetic conservation of Salmonid Fishes. NATO ASI Series A Life Sciences (ed. by J.G. Cloud & G.H. Thorgaard), pp. 1-22. Plenum, New York, USA.
11. Kohlmann K. & Kersten P. (1999) Genetic variability of German and foreign common carp (Cyprinus carpio L.) populations. Aquaculture 173, 435-445.
12. Kohlmann K., Gross R., Murakaeva & Kersten P (2003) Genetic variability and structure of common carp (Cyprinus carpio) populations throughout the distribution range inferred from allozyme microsatellite and mitochondrial DNA markers. Aquaculture Living Resources 16, 421-431.
13. Larhammar D. & Risinger C. (1994) Molecular genetic aspects of tetraploidy in the common carp, Cyprinus carpio L. Molecular Phylogenetics and Evolution 3, 59-68.
14. Lynch M. (1991) Analysis of population genetic structure by DNA fingerprinting. In: DNA Fingerprinting Approaches and Applications (ed. by T. Burke, G. Dolf, A.J. Je reys & R. Wolf), pp. 113-126. Basel, Switzerland.
15. Lynch M. & Milligan B.G. (1994) Analysis of population genetic structure with RAPD markers. Molecular Ecology 3, 91-99.
16. Nakajima M., Kita A. & Fujio Y. (1986) Genetic features of natural and cultured populations inmasu salmon Tohoku. Journal of Agricultural Research 37, 31-42.
17. Nei M. (1972) Genetic distance between populations. American Naturalist 106, 283-292.
18. Nei M. (1978) Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89, 583-590.
19. Ohno S., Muramoto J., Christian L. & Atkin N. (1967) Diploid-tetraploid relationship among old-world members of the family Cyprinidae. Chromosoma 23, 1-9.
20. Paaver T. (1986) The low level of genetic variability of the Donaldson rainbow trout strain. Proceeding of Academic Science Estonian SSR, Biology 35, 193-197.
21. Porebski S., Baiely L.G. & Baum B.R. (1997) Modification of CTAB DNA extraction protocol for plants containing high polysaccharide and polyphenol components. Plant Molecular Biology Reporter 15, 8-15.
22. Staahl G. (1983) Differences in the amount and distribution of genetic variation between natural populations and hatchery stocks of Atlantic salmon. In: Genetics in Aquaculture Proceeding of an International Symposium (ed. by N.P. Wilkins & E.M. Gostling), 29 March-2 April Galway, Ireland. Aquaculture 33, 23-32.
23. Utter F., Aebersold P. & Winans G. (1987) Interpreting genetic variation detected by electrophoresis. In: Population Genetics and Fishery Management (ed. by N. Ryman & F. Utter), pp. 21-46. University of Washington Press, London, UK.
24. Verspoor E. (1988) Reduced genetic variability in first generation hatchery population of Atlantic salmon (Salmon salar). Canadian Journal of Fisheries and Aquatic Sciences 45, 1686-1690.
25. Vuorinen J. (1984) Reduced genetic variability in a hatchery stock of brown trout Salmon trutta. Journal of Fish Biology 24, 39-348.
26. Ward J.H. (1963) Hierarchic grouping to optimize an objective function. Journal of American Statistical Association 58, 236-239.
27. Welsh J. & McClelland M. (1990) Fingerprinting genomes using PCR with arbitrary primers. Nucleic Acid Research 18, 7213-7218.
28. Williams J.G.K., Kubelik A.R., Livak K.J., Rafalski F.A. & Tingey S.V. (1990) DNA polymorphism amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Research 18, 6531-6535.
29. Yeh F.C., Yang R.C. & Boyle T. (1999) POPGENE version 1.31: Microsoft Window-based freeware for population genetic analysis. ftp://ftp.microsoft.com/Softlib/HPGL.EXE