-
1
-
-
0042885601
-
-
BIOS Scientific Oxford
-
Orengo CA, Jones DT, Thornton JM, Bioinformatics: Genes, Proteins and Computers, BIOS Scientific Oxford, 2003.
-
(2003)
Bioinformatics: Genes, Proteins and Computers
-
-
Orengo, C.A.1
Jones, D.T.2
Thornton, J.M.3
-
2
-
-
0027440362
-
Protein structure comparison by alignment of distance matrices
-
Holm L, Sander C, Protein structure comparison by alignment of distance matrices, J Mol Biol 233(1):123-138, 1993.
-
(1993)
J Mol Biol
, vol.233
, Issue.1
, pp. 123-138
-
-
Holm, L.1
Sander, C.2
-
3
-
-
0031715982
-
Protein structure alignment by incremental combinatorial extension (CE) of the optimal path
-
Shindyalov IN, Bourne PE, Protein structure alignment by incremental combinatorial extension (CE) of the optimal path, Protein Eng 11(9):739-747, 1998.
-
(1998)
Protein Eng
, vol.11
, Issue.9
, pp. 739-747
-
-
Shindyalov, I.N.1
Bourne, P.E.2
-
4
-
-
0024349252
-
Protein structure alignment
-
Taylor WR, Orengo CA, Protein structure alignment, J Mol Biol 208:1-22, 1989.
-
(1989)
J Mol Biol
, vol.208
, pp. 1-22
-
-
Taylor, W.R.1
Orengo, C.A.2
-
5
-
-
0025719208
-
Efficient detection of three-dimensional structural motifs in biological macromolecules by computer vision techniques
-
Nussinov R, Wolfson HJ, Efficient detection of three-dimensional structural motifs in biological macromolecules by computer vision techniques, Proc Natl Acad Sci USA 88:10495-10499, 1991.
-
(1991)
Proc Natl Acad Sci USA
, vol.88
, pp. 10495-10499
-
-
Nussinov, R.1
Wolfson, H.J.2
-
6
-
-
0029936121
-
Surprising similarities in structure comparison
-
Gibrat JF, Madej T, Bryant H, Surprising similarities in structure comparison, Curr Opin Struct Biol 6:377-385, 1996.
-
(1996)
Curr Opin Struct Biol
, vol.6
, pp. 377-385
-
-
Gibrat, J.F.1
Madej, T.2
Bryant, H.3
-
7
-
-
0030339935
-
Using iterative dynamic programming to obtain accurate pairwise and multiple alignments of protein structures
-
Gerstein M, Levitt M, Using iterative dynamic programming to obtain accurate pairwise and multiple alignments of protein structures, Proc 4th Intl Conf Intell Syst Mol Biol (ISMB'96), pp. 59-67, 1996.
-
(1996)
Proc 4th Intl Conf Intell Syst Mol Biol (ISMB'96)
, pp. 59-67
-
-
Gerstein, M.1
Levitt, M.2
-
8
-
-
0345007602
-
Protein structure alignment using a graph matching technique
-
Akutsu T, Protein structure alignment using a graph matching technique, Proc Genome Inform Wksp 1995 (GIW'95), pp. 1-8, 1995.
-
(1995)
Proc Genome Inform Wksp 1995 (GIW'95)
, pp. 1-8
-
-
Akutsu, T.1
-
9
-
-
0035367071
-
Protein structure similarities
-
Koehl P, Protein structure similarities, Curr Opin Struct Biol 11:348-353, 2001.
-
(2001)
Curr Opin Struct Biol
, vol.11
, pp. 348-353
-
-
Koehl, P.1
-
10
-
-
0347719528
-
Evaluation of protein fold comparison servers
-
Novotny M, Madsen D, Kleywegt GJ, Evaluation of protein fold comparison servers, Proteins Struct Funct Genet 54:260-270, 2004.
-
(2004)
Proteins Struct Funct Genet
, vol.54
, pp. 260-270
-
-
Novotny, M.1
Madsen, D.2
Kleywegt, G.J.3
-
11
-
-
2442645157
-
Rapid 3D protein structure database searching using information retrieval techniques
-
Aung Z, Tan KL, Rapid 3D protein structure database searching using information retrieval techniques, Bioinformatics 20:1045-1052, 2004.
-
(2004)
Bioinformatics
, vol.20
, pp. 1045-1052
-
-
Aung, Z.1
Tan, K.L.2
-
12
-
-
13444279981
-
Comprehensive evaluation of protein structure alignment methods: Scoring by geometric measures
-
Kolodny R, Koehl P, Levitt M, Comprehensive evaluation of protein structure alignment methods: Scoring by geometric measures, J Mol Biol 346:1173-1188, 2005.
-
(2005)
J Mol Biol
, vol.346
, pp. 1173-1188
-
-
Kolodny, R.1
Koehl, P.2
Levitt, M.3
-
13
-
-
0030017889
-
Analysis of topological and nontopological structural similarities in the PDB: New examples with old structures
-
Alexandrov NN, Fischer D, Analysis of topological and nontopological structural similarities in the PDB: New examples with old structures, Proteins Struct Funct Genet 25:354-365, 1996.
-
(1996)
Proteins Struct Funct Genet
, vol.25
, pp. 354-365
-
-
Alexandrov, N.N.1
Fischer, D.2
-
15
-
-
0000840656
-
Structural similarity of DNA-binding domains of bacteriophage repressors and the globin core
-
Subbiah S, Laurents DV, Levitt M, Structural similarity of DNA-binding domains of bacteriophage repressors and the globin core, Curr Biol 3:141-148, 1993.
-
(1993)
Curr Biol
, vol.3
, pp. 141-148
-
-
Subbiah, S.1
Laurents, D.V.2
Levitt, M.3
-
17
-
-
33846517097
-
Protein structure determination and dynamic simulation
-
ISU Summer Institute on Bio-informatics Lecture Notes
-
Wu Z, Protein structure determination and dynamic simulation, ISU Summer Institute on Bio-informatics lecture notes, 2003. http://www.math.iastate.edu/wu/LectureNotes/SummerInstitute.ppt.
-
(2003)
-
-
Wu, Z.1
-
18
-
-
0033824470
-
DaliLite workbench for protein structure comparison
-
Holm L, Park J, DaliLite workbench for protein structure comparison, Bioinformatics 16(6):566-567, 2000.
-
(2000)
Bioinformatics
, vol.16
, Issue.6
, pp. 566-567
-
-
Holm, L.1
Park, J.2
-
19
-
-
0030310317
-
Assessing the performance of fold recognition methods by means of a comprehensive benchmark
-
Fischer D, Elofsson A, Rice D, Eisenberg D, Assessing the performance of fold recognition methods by means of a comprehensive benchmark, Proc 1996 Pacific Symp Biocomput pp. 300-318, 1996.
-
(1996)
Proc 1996 Pacific Symp Biocomput
, pp. 300-318
-
-
Fischer, D.1
Elofsson, A.2
Rice, D.3
Eisenberg, D.4
-
20
-
-
0030792253
-
SCOP: A structural classification of proteins database
-
Hubbard TJP, Ailey B, Brenner SE, Murzin AG, Chothia C, SCOP: A structural classification of proteins database, Nucl Acids Res 25(1):236-239, 1997,
-
(1997)
Nucl Acids Res
, vol.25
, Issue.1
, pp. 236-239
-
-
Hubbard, T.J.P.1
Ailey, B.2
Brenner, S.E.3
Murzin, A.G.4
Chothia, C.5
|