Genetic variation of foot-and-mouth disease virus isolates recovered from persistently infected water buffalo (Bubalus bubalis)

Veterinary Microbiology

Volumn 120, Issue 1-2, 2007, Pages 50-62

  Barros, José Júnior F ^a,b   Malirat, Viviana ^b   Rebello, Moacyr A ^a   Costa, Eliane V ^c   Bergmann, Ingrid E ^b  

^a FEDERAL UNIVERSITY OF RIO DE JANEIRO   (Brazil)

^b Pan American Foot and Mouth Disease Center   (Brazil)

^c INSTITUTO OSWALDO CRUZ   (Brazil)

Author keywords

Foot and mouth disease virus; Genetic variability; Persistent infections; Quasi species; Water buffalo

Indexed keywords

RIBONUCLEASE T1;

ANIMAL EXPERIMENT; ANIMAL MODEL; ARTICLE; BUBALUS BUBALIS; BUFFALO; FOOT AND MOUTH DISEASE VIRUS; GENETIC VARIABILITY; GENOTYPE; NONHUMAN; PERSISTENT INFECTION; VIRUS ISOLATION; VIRUS STRAIN;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; BUFFALOES; CAPSID PROTEINS; FOOT-AND-MOUTH DISEASE; FOOT-AND-MOUTH DISEASE VIRUS; MOLECULAR SEQUENCE DATA; PHYLOGENY; SEQUENCE ALIGNMENT; TIME FACTORS; VARIATION (GENETICS);

BUBALUS; BUBALUS BUBALIS; FOOT-AND-MOUTH DISEASE VIRUS;

EID: 33846493700     PISSN: 03781135     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.vetmic.2006.10.023     Document Type: Article

References (63)

1. Aaronson R.P., Young J.F., and Palese P. Oligonucleotide mapping evaluation of its sensitivity by computer-simulator. Nucleic Acids Res. 10 (1982) 237
2. Acharya R., Fry E.L., Stuart D., Fox G., Rowlands D., and Brown F. The three-dimensional structure of foot-and-mouth disease virus at 2.9 Å resolution. Nature 337 (1989) 709-716
3. Aggarwal N., and Barnett P.V. Antigenic sites of foot-and-mouth disease virus (FMDV): an analysis of the specificities of anti-FMDV antibodies after vaccination of naturally susceptible host species. J. Gen. Virol. 83 (2002) 775-782
4. Astudillo V., Rosenberg F.J., Zottele A., and Casa Olascoaga R. Considerações sobre a saúde animal na América Latina. Hora Vet. 54 9 (1990) 37-43
5. Augé de Mello P., Honigman M.N., Fernández M.V., and Gomes I. Further information on the survival of modified foot-and-mouth disease virus in cattle. Bull. Off. Int. Epizoot. 73 (1970) 489-505
6. Augé de Mello P., Olascoaga R.C., Costa Giomi M.P., Alonso F.A., Scodeller E.A., La Torre J.L., and Bergmann I.E. RNA fingerprinting of South American prototype aphthovirus strains. Vaccine 4 (1986) 105-110
7. Bachrach H.L. Foot-and-mouth disease virus. Annu. Rev. Microbiol. 22 (1968) 201-244
8. Barnett P.V., Ouldridge E.J., Rowlands D.J., Brown F., and Parry N.R. Neutralizing epitopes on type O foot-and-mouth disease virus. I. Identification and characterization of three functionally independent, conformational sites. J. Gen. Virol. 70 (1989) 1483-1491
9. Bastos A.D.S., Boshoff C.I., Keet D.F., Bengis R.G., and Thomson G.R. Natural transmission of foot-and-mouth disease virus between African buffalo (Syncerus caffer) and impala (Aepyceros melampus) in the Kruger National Park, South Africa. Epidemiol. Infect. 124 (2000) 591-598
10. Bastos A.D.S., Haydon D.T., Forsberg R., Knowles N.J., Anderson E.C., Bengis R.G., Nel L.H., and Thomson G.R. Genetic heterogeneity of SAT-1 type foot-and-mouth disease viruses in southern Africa. Arch. Virol. 146 (2001) 1537-1551
11. Bengis R.G., Thomson G.R., Hedger R.S., De Vos V., and Pini A. Foot-and-mouth disease and the African buffalo (Syncerus caffer). I. Carriers as a source of infection for cattle. Onderstepoort J. Vet. Res. 53 2 (1986) 69-73
12. Bergmann I.E., Tiraboschi B.H., Affonso Boller M.A., Malirat V., Pereira P.J.V., and Augé de Mello P. Development of a more rapid and simple procedure for two-dimensional oligonucleotide analysis of foot-and-mouth disease virus: RNA minifingerprinting. Bol. Cent. Panam. Fiebre Aftosa 55 (1989) 39-42
13. Bergmann I.E., Malirat V., Augé de Mello P., and Gomes I. Detection of foot-and-mouth disease viral sequences in various fluids and tissues during persistence of the virus in cattle. Am. J. Vet. Res. 57 2 (1996) 134-137
14. Bittle J.L., Houghten R.A., Alexander H., Shinnick T.M., Sutcliffe L.G., Lerner R.A., Rowlands D.J., and Brown F. Protection against foot-and-mouth disease by immunization with a chemically synthesized peptide predicted from the viral nucleotide sequence. Nature 298 (1982) 30-33
15. Borrego B., Novella I.S., Giralt E., Andreu D., and Domingo E. Distinct repertoire of antigenic variants of foot-and-mouth disease virus in the presence or absence of immune selection. J. Virol. 67 (1993) 6071-6079
16. Buonagurio D.A., Nakada S., Desselberger U., Krystal M., and Palese P. Noncumulative sequence changes in the hemagglutinin genes of influenza C virus isolates. Virology 146 (1985) 221-232
17. Chomczynski P., and Sacchi N. Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal. Biochem. 162 1 (1987) 156-159
18. Clements J.E., D'Antonio N., and Narayan O. Genomic changes associated with antigenic variation of visna virus. II. Common nucleotide sequence changes detected in variants from independent isolations. J. Mol. Biol. 158 (1982) 415-434
19. Costa Giomi M.P., Bergmann I.E., Scodeller E.A., Augé de Mello P., Gomes I., and La Torre J.L. Heterogeneity of the polyribocytidylic acid tract in aphthovirus: biochemical and biological studies of viruses carrying polyribocytidylic acid tracts of different lengths. J. Virol. 51 (1984) 799-805
20. Costa Giomi M.P., Gomes I., Tiraboschi B., Augé de Mello P., Bergmann I.E., Scodelller E.A., and La torre J.L. Heterogeneity of the polyribocytidilic acid tract in aphthovirus: changes in the size of the poly (C) of viruses recovered from persistently infected cattle. Virology 162 (1988) 58-64
21. Crowther J.R., Farias S., Carpenter W.C., and Samuel A.R. Identification of a fifth neutralizable site on type O foot-and-mouth disease virus following characterization of single and quintuple monoclonal antibody escape mutants. J. Gen. Virol. 74 (1993) 1547-1553
22. Dawe P.S., Flanagan F.O., Madekurozwa R.L., Sorenson K.J., Anderson E.C., Foggin C.M., Ferris N.P., and Knowles N.J. Natural transmission of foot-and-mouth disease from African buffalo (Syncerus caffer) to cattle in a wildlife area of Zimbabwe. Vet. Rec. 134 (1994) 230-232
23. Dawe P.S., Sorensen K., Ferris N.P., Barnett I.T.R., Armstrong R.M., and Knowles N.J. Experimental transmission of foot-and-mouth disease virus from carrier African buffalo (Syncerus caffer) to cattle in Zimbabwe. Vet. Rec. 139 (1994) 211-215
24. de la Torre J.C., Dávila M., Sobrino F., Ortín J., and Domingo E. Establishment of cell lines persistently infected with foot-and-mouth disease virus. Virology 145 (1985) 24-35
25. Domingo E., Sabo D., Taniguchi T., and Weissmann C. Nucleotide sequence heterogeneity of an RNA phage population. Cell 13 (1978) 735-744
26. Domingo E., Biebricher C., Eigen M., and Holland J.J. Quasispecies and RNA Virus Evolution: Principles and Consequences (2001), Landes Bioscience, Austin
27. Ferreira M.E.V. Microtiter neutralization test for the study of foot-and-mouth disease antibodies. Bol. Cent. Panam. Fiebre Aftosa 21/22 (1976) 21-24
28. Fox G., Parry N.R., Barnett P.V., McGinn B., Rowlands D.J., and Brown F. The cell attachment site on foot-and-mouth disease virus includes the amino acid sequence RGD (arginine-glycine-aspartic acid). J. Gen. Virol. 70 (1989) 625-637
29. Gainaru M.D., Thomson G.R., Bengis R.G., Esterhuysen J.J., Bruce W., and Pini A. Foot-and-mouth disease and the African buffalo (Sincerus caffer). II. Virus excretion and transmission during acute infection. Onderstepoort J. Vet. Res. 56 (1986) 75-85
30. Gebauer F., de la Torre J.C., Gomes I., Mateu M.G., Barahona H., Tiraboschi B., Bergmann I., Augé de Mello P., and Domingo E. Rapid selection of genetic and antigenic variants of foot-and-mouth disease virus during persistence in cattle. J. Virol. 62 (1988) 2041-2049
31. Gomes I., Ramalho A.K., and Augé de Mello P. Infectivity assays of foot-and-mouth disease virus: contact transmission between cattle and buffalo (Bubalus bubalis) in the early stages of infection. Vet. Rec. 11 (1997) 43-47
32. Hahan B., Shaw G., Taylor M., Redfield R., Markham P., Salahuddin S., Wong-Staal F., Gallo R., Parks E., and Parks W. Genetic variation in HTLV-III/LAV over time in patients with AIDS or risk for AIDS. Science 232 (1986) 1548-1553
33. Hall T.A. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 41 (1999) 95-98
34. Hedger R.S., and Condy J.B. Transmission of foot-and-mouth disease from African buffalo virus carriers to bovines. Vet. Rec. 117 (1985) 205
35. Holland J.J., Spindler K., Horodyski F., Grabau E., Nichol S., and Vanderpol S. Rapid evolution of RNA genomes. Science 215 (1982) 1577-1585
36. Holland J.J., de La Torre J.C., and Steinhauer D.A. RNA virus populations as quasispecies. Curr. Top. Microbiol. Immumol. 176 (1992) 1-20
37. Hughes A.L., and Nei M. Pattern of nucleotide substitution at major histocompatibility complex loci reveals over-dominant selection. Nature 355 (1988) 167-170
38. Hughes A.L., and Nei M. Nucleotide substitution at major histocompatibility complex class II loci: evidence for overdominant selection. Proc. Natl. Acad. Sci. U.S.A. 86 (1989) 958-962
39. Kimura M. The neutral theory of molecular evolution. In: Nei M., and Koehn R.K. (Eds). Evolution of Genes and Proteins (1983), Sinauer Assoc., Sunderland, MA 208-233
40. Kitson J.D.A., McCahon D., and Belsham G.J. Sequence analysis of monoclonal antibody resistant mutants of type O foot-and-mouth disease virus: evidence for the involvement of the three exposed capsid protein in four antigenic sites. Virology 179 (1990) 26-34
41. Kumar S., Tamura K., and Nei M. MEGA 3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief. Bioinform. 5 2 (2004) 150-163
42. Leippert M., Beck E., Weiland F., and Pfaff E. Point mutations within the βG-βH loop of foot-and-mouth disease virus O1K affect virus attachment to target cells. J. Virol. 77 (1997) 1046-1051
43. Malirat V., Augé de Mello P., Tiraboschi B., Beck E., Gomes I., and Bergmann I.E. Genetic variation of foot-and-mouth disease virus during persistent infection in cattle. Virus Res. 34 (1994) 31-48
44. Malirat V., and Bergmann I.E. Fiebre Aftosa: Instrumentos Moleculares para Caracterización Viral. RT-PCR y secuenciamiento cíclico para estudios de epidemiologia molecular del virus de la fiebre aftosa. Serie de Manuales Didácticos (2003), Pan-American Foot-and-Mouth Disease Center p. 17
45. Martínez M.A., Dopazo J., Hernández J., Mateu M.G., Sobrino F., Domingo E., and Knowles J. Evolution of the capsid protein genes of foot-and-mouth disease virus: antigenic variation without accumulation of amino acid substitutions over six decades. J. Virol. 66 (1992) 3557-3565
46. Nakajima K., Desselberger U., and Palese P. Recent human influenza A (H1N1) viruses are closely related genetically to strains isolated in 1950. Nature 274 (1978) 334-339
47. Neff S., Sa-Carvalho D., Rieder E., Mason P.W., Blystone S.D., Brown E.J., and Baxt B. Foot-and-mouth disease virus virulent for cattle utilizes the integrin αvβ3 as its receptor. J. Virol. 72 (1998) 3587-3594
48. Nei M. Genetic polymorphism and the role of mutation in evolution. In: Nei M., and Koehn R.K. (Eds). Evolution of Genes and Proteins (1983), Sinauer Assoc., Sunderland, MA 165-190
49. Neitzert E., Beck E., Augé de Mello P., Gomes I., and Bergmann I.E. Expression of the aphthovirus RNA polymerase gene in Escherichia coli and its use together with other bioengineered nonstructural antigens in detection of late persistent infections. Virology 184 (1991) 799-804
50. Payne S.L., Salinovich O., Nauman S.M., Issel C.J., and Montelaro R.C. Course and extent of variation of equine infectious anemia virus during parallel persistent infections. J. Virol. 61 (1987) 266-1270
51. Pereira H.G. Foot-and-mouth disease. In: Gibbs E.P.G. (Ed). Virus Diseases of Food Animals vol. 2 (1981), Academic Press, New York 333-363
52. Pfaff E., Mussgay M., Bohm H.O., Schulze G.E., and Schaller H. Antibodies against a preselected peptide recognize and neutralize foot-and-mouth disease virus. EMBO J. 1 (1982) 869-874
53. Saitou N., and Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 241 (1987) 1-18
54. Salt J.S. The carrier state in foot-and-mouth disease-an immunological review. Br. Vet. J. 149 (1993) 207-223
55. Samara S.I., and Pinto A.A. Detection of foot-and-mouth disease carriers among water buffalo (Bubalus bubalis) after an outbreak of the disease in cattle. Vet. Rec. 113 20 (1983) 472-473
56. Sanger F., Nicklen S., and Coulson A.R. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. U.S.A. 74 (1977) 5463-5467
57. Sobrino F., Dávila M., Ortín J., and Domingo E. Multiple genetic variants arise in the course of replication of foot-and-mouth disease virus in cell cultures. Virology 128 (1983) 310-318
58. Sutmöller P., and Gaggero A. Foot-and-mouth disease carriers. Vet. Rec. 77 (1965) 968-969
59. Sutmöller, P., Barteling, S.S., 2004. Discussion paper on the risks posed by FMD carriers occurring amongst vaccinated cattle. Report of the Session of the Research Group of the Standing Technical Committee of the European Commission for the Control of Foot-and-Mouth Disease, vol. 63, Crete, Greece, October 12-15, pp. 392-402.
60. van Bekkum J.G., Frenkel H.S., Frederiks H.H.J., and Frenkel S. Observations on the carrier state of cattle exposed to foot-and-mouth disease virus. Tijdschr. Diergeneeskd 84 (1959) 1159-1164
61. Verdaguer N., Sevilla N., Valero M.L., Stuart D., Brocchi E., Andreu D., Giralt E., Domingo E., Mateu M.G., and Fita I. A similar pattern of interaction for different antibodies with a major antigenic site of foot-and-mouth disease virus: implications for intratypic antigenic variation. J. Virol. 72 (1998) 739-748
62. Vosloo W., Bastos A.D., Kirkbride E., Esterhuysen J.J., Janse van Rensburg D., Bengis R.G., Keet D.F., and Thomson G.R. Persistent infection of African buffalo (Syncerus caffer) with SAT type foot-and-mouth disease viruses: rate of fixation of mutations, antigenic change and interspecies transmission. J. Gen. Virol. 77 (1996) 1457-1467
63. Xie Q.C., McCahon D., Crowther J.R., Belsham G.J., and McCullough K.C. Neutralization of foot-and-mouth disease virus can be mediated through any of at least three separate antigenic sites. J. Gen. Virol. 68 (1987) 1637-1647